def test_monitored_directory_validates(self):
configuration_svc = dict()
configuration_svc["monitored_directories"] = ["/data/testarteria1/runfolders"]
runfolder_svc = RunfolderService(configuration_svc, logger)
runfolder = "/data/testarteria1/runfolders/runfolder1"
# passes if no exception:
runfolder_svc._validate_is_being_monitored(runfolder)
# Doesn't matter if the configuration specifies an extra separator:
configuration_svc["monitored_directories"] = ["/data/testarteria1/runfolders/"]
runfolder_svc._validate_is_being_monitored(runfolder)
def test_list_available_runfolders(self):
# Setup
configuration_svc = {
"monitored_directories":
["/data/testarteria1/mon1", "/data/testarteria1/mon2"],
"completed_marker_file":
"RTAComplete.txt"
}
runfolder_svc = RunfolderService(configuration_svc, logger)
runfolder_svc._file_exists = self._valid_runfolder
runfolder_svc._file_exists_and_is_older_than = self._is_older_wrapper
runfolder_svc._subdirectories = lambda path: ["runfolder001"]
runfolder_svc._host = lambda: "localhost"
# Test
runfolders = runfolder_svc.list_available_runfolders()
runfolders = list(runfolders)
self.assertEqual(len(runfolders), 2)
runfolders_str = sorted([str(runfolder) for runfolder in runfolders])
expected = [
"ready: /data/testarteria1/mon1/runfolder001@localhost",
"ready: /data/testarteria1/mon2/runfolder001@localhost"
]
self.assertEqual(runfolders_str, expected)
def test_next_runfolder(self):
# Setup
configuration_svc = {
"monitored_directories": [
"/data/testarteria1/mon1"
]
}
# Since keys in configuration_svc can be directly indexed, we can mock it with a dict:
runfolder_svc = RunfolderService(configuration_svc, logger)
runfolder_svc._file_exists = self._valid_runfolder
runfolder_svc._subdirectories = lambda path: ["runfolder001"]
runfolder_svc._host = lambda: "localhost"
# Test
runfolder = runfolder_svc.next_runfolder()
expected = "READY: /data/testarteria1/mon1/runfolder001@localhost"
self.assertEqual(str(runfolder), expected)
def test_list_available_runfolders(self):
# Setup
configuration_svc = {
"monitored_directories": [
"/data/testarteria1/mon1",
"/data/testarteria1/mon2"
]
}
runfolder_svc = RunfolderService(configuration_svc, logger)
runfolder_svc._file_exists = self._valid_runfolder
runfolder_svc._subdirectories = lambda path: ["runfolder001"]
runfolder_svc._host = lambda: "localhost"
# Test
runfolders = runfolder_svc.list_available_runfolders()
runfolders = list(runfolders)
self.assertEqual(len(runfolders), 2)
runfolders_str = sorted([str(runfolder) for runfolder in runfolders])
expected = ["READY: /data/testarteria1/mon1/runfolder001@localhost",
"READY: /data/testarteria1/mon2/runfolder001@localhost"]
self.assertEqual(runfolders_str, expected)
def test_next_runfolder(self):
# Setup
configuration_svc = {
"monitored_directories": ["/data/testarteria1/mon1"],
"completed_marker_file": "RTAComplete.txt"
}
# Since keys in configuration_svc can be directly indexed, we can mock it with a dict:
runfolder_svc = RunfolderService(configuration_svc, logger)
runfolder_svc._file_exists = self._valid_runfolder
runfolder_svc._file_exists_and_is_older_than = self._is_older_wrapper
runfolder_svc._subdirectories = lambda path: ["runfolder001"]
runfolder_svc._host = lambda: "localhost"
# Test
runfolder = runfolder_svc.next_runfolder()
expected = "ready: /data/testarteria1/mon1/runfolder001@localhost"
self.assertEqual(str(runfolder), expected)
def test_monitored_directory_validates(self):
configuration_svc = dict()
configuration_svc["monitored_directories"] = [
"/data/testarteria1/runfolders"
]
runfolder_svc = RunfolderService(configuration_svc, logger)
runfolder = "/data/testarteria1/runfolders/runfolder1"
# passes if no exception:
runfolder_svc._validate_is_being_monitored(runfolder)
# Doesn't matter if the configuration specifies an extra separator:
configuration_svc["monitored_directories"] = [
"/data/testarteria1/runfolders/"
]
runfolder_svc._validate_is_being_monitored(runfolder)
