def test_tomo1(self): options = tu.set_experiment('tomo') plugin = 'savu.plugins.test_plugin' loader_dict = {} data_dict = {'in_datasets': ['tomo', 'tomo'], 'out_datasets': ['test']} saver_dict = {} all_dicts = [loader_dict, data_dict, saver_dict] run_protected_plugin_runner_no_process_list(options, plugin, data=all_dicts)
def test_tomo4(self): options = tu.set_experiment('tomo') plugin = 'savu.plugins.test_plugin' preview = ['10:-10:10:1', '10:-10:10:1', '10:-10:10:1'] loader_dict = {'preview': preview} data_dict = {'in_datasets': ['tomo', 'tomo'], 'out_datasets': ['test']} all_dicts = [loader_dict, data_dict, {}] exp = run_protected_plugin_runner_no_process_list(options, plugin, data=all_dicts) exp = self.assertEqual(exp.index['in_data']['test'].get_shape(), (8, 12, 15))
def test_median_filter(self): options = tu.set_experiment('tomo') plugin = 'savu.plugins.filters.median_filter' run_protected_plugin_runner_no_process_list(options, plugin)
def test_band_pass(self): options = tu.set_experiment('tomo') plugin = 'savu.plugins.filters.band_pass' run_protected_plugin_runner_no_process_list(options, plugin)
def rest_ring_artefact_removal(self): options = tu.set_experiment('tomo') plugin = 'savu.plugins.filters.ring_artefact_removal' run_protected_plugin_runner_no_process_list(options, plugin)
def test_simple_recon(self): options = tu.set_experiment('tomo') plugin = 'savu.plugins.reconstructions.simple_recon' run_protected_plugin_runner_no_process_list(options, plugin)
def test_paganin1(self): options = tu.set_experiment('tomoRaw') plugin = 'savu.plugins.paganin_filter' run_protected_plugin_runner_no_process_list(options, plugin)
def test_sinogram_alignment(self): options = tu.set_experiment('tomo') plugin = 'savu.plugins.filters.sinogram_alignment' run_protected_plugin_runner_no_process_list(options, plugin)
def test_denoise_bregman_test(self): options = tu.set_experiment('tomo') plugin = 'savu.plugins.filters.denoise_bregman_filter' run_protected_plugin_runner_no_process_list(options, plugin)
def test_astra_recon_gpu(self): options = tu.set_experiment("tomo", process_names="GPU0") plugin = astra_recons.__name__ + ".astra_recon_gpu" run_protected_plugin_runner_no_process_list(options, plugin)
def test_astra_recon_cpu_stxm(self): options = tu.set_experiment('tomo') plugin = astra_recons.__name__ + '.astra_recon_cpu' run_protected_plugin_runner_no_process_list(options, plugin)
def "r6"(self): options = tu.set_experiment("r7") plugin = "r8" run_protected_plugin_runner_no_process_list(options, plugin)