コード例 #1
0
 def GetLocalConstraintsForRoot(self, file_prefix):
     then_vtree_filename = "%s/%s_then_vtree.vtree" % (file_prefix,
                                                       self.name)
     then_sdd_filename = "%s/%s_then_sdd.sdd" % (file_prefix, self.name)
     constraint = {}
     constraint["then_vtree"] = then_vtree_filename
     constraint["then"] = [then_sdd_filename]
     universe = []
     # internal edges
     for sub_region_edge_tup in self.sub_region_edges:
         universe.append(sub_region_edge_tup)
     GraphSet.set_universe(universe)
     universe = GraphSet.universe()
     paths = GraphSet()
     child_names = self.children.keys()
     for (i, j) in itertools.combinations(child_names, 2):
         paths = paths.union(GraphSet.paths(i, j))
     name_to_sdd_index = {}
     zdd_to_sdd_index = [None]  # for generating sdd from graphset
     sdd_index = 0
     for child in child_names:
         sdd_index += 1
         name_to_sdd_index["c%s" % child] = sdd_index
     for sub_region_edge in universe:
         corresponding_network_edges = self.sub_region_edges[
             sub_region_edge]
         coresponding_network_edges_sdd_index = []
         for single_edge in corresponding_network_edges:
             sdd_index += 1
             name_to_sdd_index[str(single_edge)] = sdd_index
             coresponding_network_edges_sdd_index.append(sdd_index)
         zdd_to_sdd_index.append(coresponding_network_edges_sdd_index)
     constraint["then_variable_mapping"] = name_to_sdd_index
     rl_vtree = sdd.sdd_vtree_new(sdd_index, "right")
     sdd_manager = sdd.sdd_manager_new(rl_vtree)
     sdd.sdd_vtree_free(rl_vtree)
     sdd.sdd_manager_auto_gc_and_minimize_off(sdd_manager)
     # Construct simple path constraint
     simple_path_constraint = generate_sdd_from_graphset(
         paths, sdd_manager, zdd_to_sdd_index)
     # non empty path in this region map
     none_of_child = sdd.util.sdd_negative_term(
         sdd_manager,
         [name_to_sdd_index["c%s" % child] for child in self.children])
     case_one = sdd.sdd_conjoin(none_of_child, simple_path_constraint,
                                sdd_manager)
     # empty path in this region map
     exactly_one_child = sdd.util.sdd_exactly_one(
         sdd_manager,
         [name_to_sdd_index["c%s" % child] for child in self.children])
     empty_path_constraint = sdd.util.sdd_negative_term(
         sdd_manager, sum(zdd_to_sdd_index[1:], []))
     case_two = sdd.sdd_conjoin(exactly_one_child, empty_path_constraint,
                                sdd_manager)
     total_constraint = sdd.sdd_disjoin(case_one, case_two, sdd_manager)
     sdd.sdd_save(then_sdd_filename, total_constraint)
     sdd.sdd_vtree_save(then_vtree_filename,
                        sdd.sdd_manager_vtree(sdd_manager))
     sdd.sdd_manager_free(sdd_manager)
     return constraint
コード例 #2
0
ファイル: sdd_formula.py プロジェクト: miguelvidex/ProbLog
    def __getstate__(self):
        tempfile = mktempfile()
        vtree = sdd.sdd_manager_vtree(self.get_manager())
        sdd.sdd_vtree_save(tempfile, vtree)
        with open(tempfile) as f:
            vtree_data = f.read()

        nodes = []
        for n in self.nodes:
            if n is not None:
                sdd.sdd_save(tempfile, n)

                with open(tempfile) as f:
                    nodes.append(f.read())
            else:
                nodes.append(None)

        sdd.sdd_save(tempfile, self.constraint_dd)
        with open(tempfile) as f:
            constraint_dd = f.read()

        os.remove(tempfile)
        return {
            'varcount': self.varcount,
            'nodes': nodes,
            'vtree': vtree_data,
            'constraint_dd': constraint_dd
        }
コード例 #3
0
def main():
    config_file = sys.argv[1]

    with open(config_file, 'r') as f:
        config = json.load(f)
        basename = str("../../" + config[u"output_filepath"] +
                       config[u"name"] + "_" + config[u"id"])
        output_filename = basename + ".odd"
        documentation_filename = basename + ".txt"

    alpha, vtree, mgr = convert_obdd_to_sdd(output_filename,
                                            documentation_filename)
    sdd.sdd_save(basename + ".sdd", alpha)
    sdd.sdd_vtree_save(basename + ".vtree", vtree)
コード例 #4
0
def sdd_exactly_one_among(manager, active_variables, background_variables):
    if not all(x in background_variables for x in active_variables):
        raise Exception(
            "Invalid argument active variables %s, background_variables %s " %
            (active_variables, background_variables))
    result = sdd.sdd_manager_false(manager)
    for positive_variable in active_variables:
        cur_term = sdd.sdd_manager_true(manager)
        for variable in background_variables:
            if variable != positive_variable:
                cur_lit = sdd.sdd_manager_literal(-variable, manager)
            else:
                cur_lit = sdd.sdd_manager_literal(variable, manager)
            cur_term = sdd.sdd_conjoin(cur_term, cur_lit, manager)
        sdd.sdd_save("t1.sdd", result)
        sdd.sdd_save("t2.sdd", cur_term)
        sdd.sdd_vtree_save("manager.vtree", sdd.sdd_manager_vtree(manager))
        result = sdd.sdd_disjoin(result, cur_term, manager)
    return result
コード例 #5
0
def convert(filename):
    start = time.time()
    manager,alpha = orig.parse_bdd(filename+".zdd")
    end = time.time()
    print "      sdd node count: %d" % sdd.sdd_count(alpha)
    print "            sdd size: %d" % sdd.sdd_size(alpha)
    print "     sdd model count: %d" % sdd.sdd_model_count(alpha,manager)
    print "  global model count: %d" % orig.global_model_count(alpha,manager)
    print "       read bdd time: %.3fs" % (end-start)

    sdd.sdd_save(filename + ".sdd",alpha)
    #sdd.sdd_save_as_dot(filename +".sdd.dot",alpha)
    vtree = sdd.sdd_manager_vtree(manager)
    sdd.sdd_vtree_save(filename + ".vtree",vtree)
    #sdd.sdd_vtree_save_as_dot(filename +".vtree.dot",vtree)

    print "===================="
    print "before garbage collecting..." 
    print "live size:", sdd.sdd_manager_live_count(manager)
    print "dead size:", sdd.sdd_manager_dead_count(manager)
    print "garbage collecting..."
    sdd.sdd_manager_garbage_collect(manager)
    print "live size:", sdd.sdd_manager_live_count(manager)
    print "dead size:", sdd.sdd_manager_dead_count(manager)
コード例 #6
0
 def GetLocalConstraintsForInternalClusters(self, file_prefix):
     if_vtree_filename = "%s/%s_if_vtree.vtree" % (file_prefix, self.name)
     if_sdd_filename_prefix = "%s/%s_if_sdd" % (file_prefix, self.name)
     then_vtree_filename = "%s/%s_then_vtree.vtree" % (file_prefix,
                                                       self.name)
     then_sdd_filename_prefix = "%s/%s_then_sdd" % (file_prefix, self.name)
     ifs = []
     thens = []
     if_variable_mapping = {}
     if_sdd_index = 0
     if_sdd_index += 1
     if_variable_mapping[
         "c%s" %
         self.name] = if_sdd_index  # cluster indicator for current cluster
     for external_edge in self.external_edges:
         if_sdd_index += 1
         if_variable_mapping[str(external_edge)] = if_sdd_index
     then_variable_mapping = {}
     # variables for the child clusters
     then_sdd_index = 0
     zdd_to_sdd_index = [None]
     for child in self.children:
         then_sdd_index += 1
         then_variable_mapping["c%s" % child] = then_sdd_index
     universe = self.sub_region_edges.keys()
     GraphSet.set_universe(universe)
     universe = GraphSet.universe()
     for node_pair in universe:
         correponding_sdd_indexes = []
         for internal_edge in self.sub_region_edges[node_pair]:
             then_sdd_index += 1
             then_variable_mapping[str(internal_edge)] = then_sdd_index
             correponding_sdd_indexes.append(then_sdd_index)
         zdd_to_sdd_index.append(correponding_sdd_indexes)
     if_vtree, then_vtree = sdd.sdd_vtree_new(if_sdd_index,
                                              "right"), sdd.sdd_vtree_new(
                                                  then_sdd_index, "right")
     if_manager, then_manager = sdd.sdd_manager_new(
         if_vtree), sdd.sdd_manager_new(then_vtree)
     sdd.sdd_manager_auto_gc_and_minimize_off(if_manager)
     sdd.sdd_manager_auto_gc_and_minimize_off(then_manager)
     sdd.sdd_vtree_free(if_vtree)
     sdd.sdd_vtree_free(then_vtree)
     #none of the external edges are used and cluster indicator is off
     case_index = 0
     case_one_if = sdd.util.sdd_negative_term(if_manager,
                                              range(1, if_sdd_index + 1))
     case_one_then = sdd.util.sdd_negative_term(
         then_manager, range(1, then_sdd_index + 1))
     sdd.sdd_save("%s_%s" % (if_sdd_filename_prefix, case_index),
                  case_one_if)
     sdd.sdd_save("%s_%s" % (then_sdd_filename_prefix, case_index),
                  case_one_then)
     ifs.append("%s_%s" % (if_sdd_filename_prefix, case_index))
     thens.append("%s_%s" % (then_sdd_filename_prefix, case_index))
     #none of the external edges are used and cluster indicator is on
     case_index += 1
     case_two_if = sdd.util.sdd_exactly_one_among(
         if_manager, [if_variable_mapping["c%s" % self.name]],
         range(1, if_sdd_index + 1))
     #***Non empty path in this region map
     none_of_child = sdd.util.sdd_negative_term(
         then_manager,
         [then_variable_mapping["c%s" % child] for child in self.children])
     paths = GraphSet()
     child_names = self.children.keys()
     for c1, c2 in itertools.combinations(child_names, 2):
         paths = paths.union(GraphSet.paths(c1, c2))
     simple_path_constraint = generate_sdd_from_graphset(
         paths, then_manager, zdd_to_sdd_index)
     case_one = sdd.sdd_conjoin(simple_path_constraint, none_of_child,
                                then_manager)
     #***Empty path in the region map
     exactly_one_chlid = sdd.util.sdd_exactly_one(
         then_manager,
         [then_variable_mapping["c%s" % child] for child in self.children])
     empty_path_constraint = sdd.util.sdd_negative_term(
         then_manager, sum(zdd_to_sdd_index[1:], []))
     case_two = sdd.sdd_conjoin(empty_path_constraint, exactly_one_chlid,
                                then_manager)
     case_two_then = sdd.sdd_disjoin(case_one, case_two, then_manager)
     sdd.sdd_save("%s_%s" % (if_sdd_filename_prefix, case_index),
                  case_two_if)
     sdd.sdd_save("%s_%s" % (then_sdd_filename_prefix, case_index),
                  case_two_then)
     ifs.append("%s_%s" % (if_sdd_filename_prefix, case_index))
     thens.append("%s_%s" % (then_sdd_filename_prefix, case_index))
     #Exactly one of the external edge is used and cluster_indicator is off
     aggregated_cases = {}
     for external_edge in self.external_edges:
         aggregated_cases.setdefault(self.external_edges[external_edge],
                                     []).append(external_edge)
     for entering_node in aggregated_cases:
         case_index += 1
         cur_case_if = sdd.util.sdd_exactly_one_among(
             if_manager, [
                 if_variable_mapping[str(e)]
                 for e in aggregated_cases[entering_node]
             ], range(1, if_sdd_index + 1))
         paths = GraphSet()
         for child in self.children:
             if child == entering_node:
                 continue
             paths = paths.union(GraphSet.paths(entering_node, child))
         cur_case_then = generate_sdd_from_graphset(paths, then_manager,
                                                    zdd_to_sdd_index)
         cur_case_then = sdd.sdd_disjoin(
             cur_case_then,
             sdd.util.sdd_negative_term(then_manager, [
                 then_variable_mapping[str(e)] for e in self.internal_edges
             ]), then_manager)
         #conjoin that all the child indicator is off
         cur_case_then = sdd.sdd_conjoin(
             cur_case_then,
             sdd.util.sdd_negative_term(then_manager, [
                 then_variable_mapping["c%s" % child]
                 for child in self.children
             ]), then_manager)
         sdd.sdd_save("%s_%s" % (if_sdd_filename_prefix, case_index),
                      cur_case_if)
         sdd.sdd_save("%s_%s" % (then_sdd_filename_prefix, case_index),
                      cur_case_then)
         ifs.append("%s_%s" % (if_sdd_filename_prefix, case_index))
         thens.append("%s_%s" % (then_sdd_filename_prefix, case_index))
     #Exactly two of the external edge is used and cluster_indicator is off
     aggregated_cases = {}
     for (i, j) in itertools.combinations(self.external_edges.keys(), 2):
         entering_points = (self.external_edges[i], self.external_edges[j])
         entering_points = (max(entering_points), min(entering_points))
         aggregated_cases.setdefault(entering_points, []).append((i, j))
     for entering_points in aggregated_cases:
         case_index += 1
         entering_edges = aggregated_cases[entering_points]
         cur_case_if = generate_exactly_two_from_tuples(
             if_manager,
             [(if_variable_mapping[str(e1)], if_variable_mapping[str(e2)])
              for (e1, e2) in entering_edges], range(1, if_sdd_index + 1))
         if entering_points[0] == entering_points[1]:
             cur_case_then = sdd.util.sdd_negative_term(
                 then_manager, range(1, then_sdd_index + 1))
         else:
             paths = GraphSet.paths(entering_points[0], entering_points[1])
             cur_case_then = generate_sdd_from_graphset(
                 paths, then_manager, zdd_to_sdd_index)
             cur_case_then = sdd.sdd_conjoin(
                 cur_case_then,
                 sdd.util.sdd_negative_term(then_manager, [
                     then_variable_mapping["c%s" % child]
                     for child in self.children
                 ]), then_manager)
         sdd.sdd_save("%s_%s" % (if_sdd_filename_prefix, case_index),
                      cur_case_if)
         sdd.sdd_save("%s_%s" % (then_sdd_filename_prefix, case_index),
                      cur_case_then)
         ifs.append("%s_%s" % (if_sdd_filename_prefix, case_index))
         thens.append("%s_%s" % (then_sdd_filename_prefix, case_index))
     sdd.sdd_vtree_save(if_vtree_filename,
                        sdd.sdd_manager_vtree(if_manager))
     sdd.sdd_vtree_save(then_vtree_filename,
                        sdd.sdd_manager_vtree(then_manager))
     sdd.sdd_manager_free(if_manager)
     sdd.sdd_manager_free(then_manager)
     constraint = {}
     constraint["if_vtree"] = if_vtree_filename
     constraint["if"] = ifs
     constraint["if_variable_mapping"] = if_variable_mapping
     constraint["then_vtree"] = then_vtree_filename
     constraint["then"] = thens
     constraint["then_variable_mapping"] = then_variable_mapping
     return constraint
コード例 #7
0
 def GetLocalConstraintsForLeaveClusters(self, file_prefix):
     if_vtree_filename = "%s/%s_if_vtree.vtree" % (file_prefix, self.name)
     if_sdd_filename_prefix = "%s/%s_if_sdd" % (file_prefix, self.name)
     then_vtree_filename = "%s/%s_then_vtree.vtree" % (file_prefix,
                                                       self.name)
     then_sdd_filename_prefix = "%s/%s_then_sdd" % (file_prefix, self.name)
     ifs = []
     thens = []
     if_variable_mapping = {}
     if_sdd_index = 0
     if_sdd_index += 1
     if_variable_mapping[
         "c%s" %
         self.name] = if_sdd_index  # cluster indicator for current cluster
     for external_edge in self.external_edges:
         if_sdd_index += 1
         if_variable_mapping[str(external_edge)] = if_sdd_index
     then_variable_mapping = {}
     zdd_to_sdd_index = [None]
     universe = []
     node_pair_to_edges = {}
     for internal_edge in self.internal_edges:
         if (internal_edge.x, internal_edge.y) not in node_pair_to_edges:
             universe.append((internal_edge.x, internal_edge.y))
         node_pair_to_edges.setdefault((internal_edge.x, internal_edge.y),
                                       []).append(internal_edge)
     GraphSet.set_universe(universe)
     universe = GraphSet.universe()
     then_sdd_index = 0
     for node_pair in universe:
         correponding_sdd_indexes = []
         for internal_edge in node_pair_to_edges[node_pair]:
             then_sdd_index += 1
             then_variable_mapping[str(internal_edge)] = then_sdd_index
             correponding_sdd_indexes.append(then_sdd_index)
         zdd_to_sdd_index.append(correponding_sdd_indexes)
     if_vtree, then_vtree = sdd.sdd_vtree_new(if_sdd_index,
                                              "right"), sdd.sdd_vtree_new(
                                                  then_sdd_index, "right")
     if_manager, then_manager = sdd.sdd_manager_new(
         if_vtree), sdd.sdd_manager_new(then_vtree)
     sdd.sdd_manager_auto_gc_and_minimize_off(if_manager)
     sdd.sdd_manager_auto_gc_and_minimize_off(then_manager)
     sdd.sdd_vtree_free(if_vtree)
     sdd.sdd_vtree_free(then_vtree)
     #none of the external edges are used and cluster indicator is off
     case_index = 0
     case_one_if = sdd.util.sdd_negative_term(if_manager,
                                              range(1, if_sdd_index + 1))
     case_one_then = sdd.util.sdd_negative_term(
         then_manager, range(1, then_sdd_index + 1))
     sdd.sdd_save("%s_%s" % (if_sdd_filename_prefix, case_index),
                  case_one_if)
     sdd.sdd_save("%s_%s" % (then_sdd_filename_prefix, case_index),
                  case_one_then)
     ifs.append("%s_%s" % (if_sdd_filename_prefix, case_index))
     thens.append("%s_%s" % (then_sdd_filename_prefix, case_index))
     #none of the external edges are used and cluster indicator is on
     case_index += 1
     case_two_if = sdd.util.sdd_exactly_one_among(
         if_manager, [if_variable_mapping["c%s" % self.name]],
         range(1, if_sdd_index + 1))
     paths = GraphSet()
     for (i, j) in itertools.combinations(self.nodes, 2):
         paths = paths.union(GraphSet.paths(i, j))
     case_two_then = generate_sdd_from_graphset(paths, then_manager,
                                                zdd_to_sdd_index)
     sdd.sdd_save("%s_%s" % (if_sdd_filename_prefix, case_index),
                  case_two_if)
     sdd.sdd_save("%s_%s" % (then_sdd_filename_prefix, case_index),
                  case_two_then)
     ifs.append("%s_%s" % (if_sdd_filename_prefix, case_index))
     thens.append("%s_%s" % (then_sdd_filename_prefix, case_index))
     #exactly one of the external edge is used and cluster indicator is off
     aggregated_cases = {}
     for external_edge in self.external_edges:
         aggregated_cases.setdefault(self.external_edges[external_edge],
                                     []).append(external_edge)
     for entering_node in aggregated_cases:
         case_index += 1
         cur_case_if = sdd.util.sdd_exactly_one_among(
             if_manager, [
                 if_variable_mapping[str(e)]
                 for e in aggregated_cases[entering_node]
             ], range(1, if_sdd_index + 1))
         paths = GraphSet()
         for node in self.nodes:
             if node == entering_node:
                 continue
             paths = paths.union(GraphSet.paths(entering_node, node))
         cur_case_then = generate_sdd_from_graphset(paths, then_manager,
                                                    zdd_to_sdd_index)
         # disjoin the empty path
         cur_case_then = sdd.sdd_disjoin(
             cur_case_then,
             sdd.util.sdd_negative_term(then_manager,
                                        range(1, then_sdd_index + 1)),
             then_manager)
         sdd.sdd_save("%s_%s" % (if_sdd_filename_prefix, case_index),
                      cur_case_if)
         sdd.sdd_save("%s_%s" % (then_sdd_filename_prefix, case_index),
                      cur_case_then)
         ifs.append("%s_%s" % (if_sdd_filename_prefix, case_index))
         thens.append("%s_%s" % (then_sdd_filename_prefix, case_index))
     # exactly two of the external edge is used and cluster_indicator is off
     aggregated_cases = {}
     for (i, j) in itertools.combinations(self.external_edges.keys(), 2):
         entering_points = (self.external_edges[i], self.external_edges[j])
         entering_points = (max(entering_points), min(entering_points))
         aggregated_cases.setdefault(entering_points, []).append((i, j))
     for entering_points in aggregated_cases:
         case_index += 1
         entering_edges = aggregated_cases[entering_points]
         cur_case_if = generate_exactly_two_from_tuples(
             if_manager,
             [(if_variable_mapping[str(e1)], if_variable_mapping[str(e2)])
              for (e1, e2) in entering_edges], range(1, if_sdd_index + 1))
         if entering_points[0] == entering_points[1]:
             cur_case_then = sdd.util.sdd_negative_term(
                 then_manager, range(1, then_sdd_index + 1))
         else:
             paths = GraphSet.paths(entering_points[0], entering_points[1])
             cur_case_then = generate_sdd_from_graphset(
                 paths, then_manager, zdd_to_sdd_index)
         sdd.sdd_save("%s_%s" % (if_sdd_filename_prefix, case_index),
                      cur_case_if)
         sdd.sdd_save("%s_%s" % (then_sdd_filename_prefix, case_index),
                      cur_case_then)
         ifs.append("%s_%s" % (if_sdd_filename_prefix, case_index))
         thens.append("%s_%s" % (then_sdd_filename_prefix, case_index))
     sdd.sdd_vtree_save(if_vtree_filename,
                        sdd.sdd_manager_vtree(if_manager))
     sdd.sdd_vtree_save(then_vtree_filename,
                        sdd.sdd_manager_vtree(then_manager))
     sdd.sdd_manager_free(if_manager)
     sdd.sdd_manager_free(then_manager)
     constraint = {}
     constraint["if_vtree"] = if_vtree_filename
     constraint["if"] = ifs
     constraint["if_variable_mapping"] = if_variable_mapping
     constraint["then_vtree"] = then_vtree_filename
     constraint["then"] = thens
     constraint["then_variable_mapping"] = then_variable_mapping
     return constraint
コード例 #8
0
ファイル: compile_rf.py プロジェクト: AndyShih12/RF_SDD
def run():
    with timer.Timer("reading dataset"):
        dataset = util.read_binary_dataset(test_filename)
        domain = util.read_header(test_filename)
        '''
        if OPTIONS.majority_circuit_opt:
            l = len(domain)
            for k in xrange(num_trees):
                domain["Tree_%d" % k] = l+k
        '''

    with timer.Timer("initializing manager"):
        # start sdd manager
        var_count = len(domain) - 1
        vtree = sdd.sdd_vtree_new(var_count, "balanced")
        manager = sdd.sdd_manager_new(vtree)
        #sdd.sdd_manager_auto_gc_and_minimize_on(manager)
        #sdd.sdd_manager_auto_gc_and_minimize_off(manager)
        sdd_state = SddState(vtree, manager)

    with timer.Timer("reading constraints"):
        constraint_sdd, constraint_info = encode_logical_constraints(
            constraint_filename, manager, domain)
        sdd.sdd_ref(constraint_sdd, manager)

    with timer.Timer("reading trees"):
        tree_states = []
        for filename in sorted(glob.glob(tree_basename.replace('%d', '*'))):
            tree = pygv.AGraph(filename)
            tree_state = TreeState(tree, domain, constraint_info)
            tree_states.append(tree_state)
            #tree.layout(prog='dot')
            #tree.draw(filename+".png")
        #num_trees = len(tree_states)

    with timer.Timer("compiling trees"):
        forest_sdds, _ = izip(*forest_sdds_iter(tree_states, sdd_state))
        #forest_sdds = list(forest_sdds_iter(tree_states,sdd_state))

        forest_sdds = [
            (tree_state, tree_sdd)
            for tree_state, tree_sdd in zip(tree_states, forest_sdds)
        ]
        cmpf = lambda x, y: cmp(sdd.sdd_size(x[1]), sdd.sdd_size(y[1]))
        forest_sdds.sort(cmp=cmpf)
        tree_states = [tree_state for tree_state, tree_sdd in forest_sdds]

        #ACACAC
        sdd.sdd_manager_auto_gc_and_minimize_off(manager)
        sdd.sdd_manager_minimize_limited(manager)
        stats = SddSizeStats()
        for tree_state, tree_sdd in forest_sdds:
            stats.update(tree_sdd)
            sdd.sdd_deref(tree_sdd, manager)
        sdd.sdd_manager_garbage_collect(manager)
        forest_sdds, used_vars_list = izip(
            *forest_sdds_iter(tree_states, sdd_state))
    print stats

    with timer.Timer("compiling all", prefix="| "):
        alpha = compile_all(forest_sdds, used_vars_list, num_trees, domain,
                            manager, constraint_sdd)

    with timer.Timer("evaluating"):
        msg = util.evaluate_dataset_all_sdd(dataset, alpha, manager)
    print "|     trees : %d" % num_trees
    print "--- evaluating majority vote on random forest (compiled):"
    print msg
    print "|  all size :", sdd.sdd_size(alpha)
    print "|  all count:", sdd.sdd_count(alpha)
    print " model count:", sdd.sdd_global_model_count(alpha, manager)

    with timer.Timer("checking monotonicity"):
        result = is_monotone(alpha, manager)
    print "Is monotone?", result

    #for tree_sdd in forest_sdds: sdd.sdd_deref(tree_sdd,manager)
    print "===================="
    print "before garbage collecting..."
    print "live size:", sdd.sdd_manager_live_count(manager)
    print "dead size:", sdd.sdd_manager_dead_count(manager)
    print "garbage collecting..."
    sdd.sdd_manager_garbage_collect(manager)
    print "live size:", sdd.sdd_manager_live_count(manager)
    print "dead size:", sdd.sdd_manager_dead_count(manager)

    vtree = sdd.sdd_manager_vtree(manager)
    print "Writing sdd file %s and vtree file %s" % (sdd_filename,
                                                     vtree_filename)
    sdd.sdd_save(sdd_filename, alpha)
    sdd.sdd_vtree_save(vtree_filename, vtree)

    print "Writing constraint sdd file %s and constraint vtree file %s" % (
        constraint_sdd_filename, constraint_vtree_filename)
    sdd.sdd_save(constraint_sdd_filename, constraint_sdd)
    sdd.sdd_vtree_save(constraint_vtree_filename, vtree)
コード例 #9
0
ファイル: zdd.py プロジェクト: hahaXD/hierarchical_map_python
    print "            sdd size: %d" % sdd.sdd_size(alpha)
    print "     sdd model count: %d" % sdd.sdd_model_count(alpha,manager)
    print "  global model count: %d" % global_model_count(alpha,manager)
    print "       read bdd time: %.3fs" % (end-start)

    """
    sdd.sdd_ref(alpha,manager)
    start = time.time()
    sdd.sdd_manager_minimize(manager)
    end = time.time()
    print "  min sdd node count: %d" % sdd.sdd_count(alpha)
    print "        min sdd time: %.3fs" % (end-start)
    sdd.sdd_deref(alpha,manager)
    """

    sdd.sdd_save(filename + ".sdd",alpha)
    #sdd.sdd_save_as_dot(filename +".sdd.dot",alpha)
    vtree = sdd.sdd_manager_vtree(manager)
    sdd.sdd_vtree_save(filename + ".vtree",vtree)
    #sdd.sdd_vtree_save_as_dot(filename +".vtree.dot",vtree)

    """
    print "===================="
    print "before garbage collecting..." 
    print "live size:", sdd.sdd_manager_live_count(manager)
    print "dead size:", sdd.sdd_manager_dead_count(manager)
    print "garbage collecting..."
    sdd.sdd_manager_garbage_collect(manager)
    print "live size:", sdd.sdd_manager_live_count(manager)
    print "dead size:", sdd.sdd_manager_dead_count(manager)
    """
コード例 #10
0
ファイル: minato2sdd.py プロジェクト: nhadfieldmenell/SBNs
    print "            sdd size: %d" % sdd.sdd_size(alphaNoMP)
    print "     sdd model count: %d" % sdd.sdd_model_count(alphaNoMP,managerNoMP)
    print "  global model count: %d" % global_model_count(alphaNoMP,managerNoMP)
    print "       read bdd time: %.3fs" % (end-start)

    """
    sdd.sdd_ref(alpha,manager)
    start = time.time()
    sdd.sdd_manager_minimize(manager)
    end = time.time()
    print "  min sdd node count: %d" % sdd.sdd_count(alpha)
    print "        min sdd time: %.3fs" % (end-start)
    sdd.sdd_deref(alpha,manager)
    """

    sdd.sdd_save(filename + ".sdd",alpha)
    #sdd.sdd_save_as_dot(filename +".sdd.dot",alpha)
    vtree = sdd.sdd_manager_vtree(manager)
    sdd.sdd_vtree_save(filename + ".vtree",vtree)
    #sdd.sdd_vtree_save_as_dot(filename +".vtree.dot",vtree)

    sdd.sdd_save(filenameNoMP + ".sdd",alphaNoMP)
    vtreeNoMP = sdd.sdd_manager_vtree(managerNoMP)
    sdd.sdd_vtree_save(filenameNoMP + ".vtree",vtreeNoMP)

    
    

    print "===================="
    print "before garbage collecting..." 
    print "live size:", sdd.sdd_manager_live_count(manager)