def transform_geometry(geom, crs=wgs84, to_crs=wgs84):
"""Reprojects a shapely geometry.
Parameters
----------
geom : shapely geometry
the geometry to transform
crs : crs
the geometry's crs
to_crs : crs
the crs into which the geometry must be transformed
Returns
-------
A reprojected geometry
"""
from_crs = check_crs(crs)
to_crs = check_crs(to_crs)
if isinstance(to_crs, pyproj.Proj) and isinstance(from_crs, pyproj.Proj):
project = partial(transform_proj, from_crs, to_crs)
elif isinstance(to_crs, Grid):
project = partial(to_crs.transform, crs=from_crs)
else:
raise NotImplementedError()
return shapely_transform(project, geom)
def reproject_geometry(
geom, # type: BaseGeometry
source_proj, # type: str
dest_proj # type: str
): # type: (...) -> BaseGeometry
partial_transform = partial(transform, source_proj, dest_proj)
return shapely_transform(partial_transform, geom)
def transform_geometry(geom, crs=wgs84, to_crs=wgs84):
"""Reprojects a shapely geometry.
Parameters
----------
geom : shapely geometry
the geometry to transform
crs : crs
the geometry's crs
to_crs : crs
the crs into which the geometry must be transformed
Returns
-------
A reprojected geometry
"""
from_crs = check_crs(crs)
to_crs = check_crs(to_crs)
if isinstance(to_crs, pyproj.Proj) and isinstance(from_crs, pyproj.Proj):
project = partial(transform_proj, from_crs, to_crs)
elif isinstance(to_crs, Grid):
project = partial(to_crs.transform, crs=from_crs)
else:
raise NotImplementedError()
return shapely_transform(project, geom)
def build_items(index_geom):
"""
index_geom: fioan readable file (ex, shapefile)
Build the STAC items
"""
with fiona.open(index_geom) as src:
src_crs = Proj(src.crs)
dest_crs = Proj("WGS84")
extent = box(*src.bounds)
project = Transformer.from_proj(src_crs, dest_crs)
catalog_bbox = shapely_transform(project.transform, extent)
# build spatial extent for collection
ortho_collection = GeobaseSTAC.get_child("canada_spot_orthoimages")
ortho_collection.extent.spatial = SpatialExtent(
[list(catalog_bbox.bounds)])
geobase = GeobaseSpotFTP()
count = 0
for f in src:
feature_out = f.copy()
new_coords = transform_geom(src_crs, dest_crs,
f["geometry"]["coordinates"])
feature_out["geometry"]["coordinates"] = new_coords
name = feature_out["properties"]["NAME"]
sensor = SPOT_SENSOR[name[:2]]
new_item = create_item(name, feature_out, ortho_collection)
for f in geobase.list_contents(name):
# Add data to the asset
spot_file = Asset(href=f,
title=None,
media_type="application/zip")
file_key = f[-13:-4] # image type
new_item.add_asset(file_key, spot_file)
# Add the thumbnail asset
new_item.add_asset(
key="thumbnail",
asset=Asset(
href=geobase.get_thumbnail(name),
title=None,
media_type=MediaType.JPEG,
),
)
ortho_collection.add_item(new_item)
count += 1
print(f"{count}... {new_item.id}")
def transform(self, epsg: int) -> "GeoPolygon":
if self.epsg == epsg:
raise UserWarning(f'Polygon already in {epsg} EPSG')
projection = partial(transform, Proj(init=f'epsg:{self.epsg}'),
Proj(init=f'epsg:{epsg}'))
return GeoPolygon(shapely_transform(projection, self.polygon), epsg)
def point_buffer(self, lat: float, lng: float, kilometres: float, initial_epsg: int = 4326):
aeqd_projection = f'+proj=aeqd +lat_0={lat} +lon_0={lng} +x_0=0 +y_0=0'
beginning_projection = pyproj.CRS.from_epsg(initial_epsg)
transformed_projection = partial(pyproj.transform,
pyproj.Proj(aeqd_projection),
beginning_projection)
buffer_point = Point(0, 0).buffer(kilometres * 1000) # converts distance to metres
buffer_polygon = Polygon(shapely_transform(transformed_projection, buffer_point).exterior.coords[:])
return buffer_polygon
def transform(transformer, fp): js = geojson.load(fp) # check type of geojson if js['type'] == 'Feature': js['geometry'] = shapely_transform(transformer, shape(js['geometry'])).__geo_interface__ elif js['type'] == 'FeatureCollection': for feat in js['features']: feat['geometry'] = shapely_transform(transformer, shape(feat['geometry'])).__geo_interface__ elif js['type'] == 'GeometryCollection': for i, geom in enumerate(js['geometries']): js['geometries'][i] = shapely_transform(transformer, shape(geom)).__geo_interface__ else: #point, linestring, polygon, multis, geometry collection js = shapely_transform(transformer, shape(js)).__geo_interface__ output = StringIO() geojson.dump(js, output) output.seek(0) return output
def centroids(self, size: int = 300) -> List[Point]:
"""
It generates the Centroids of a LineString. It walks the LineString generating centroids every buffer distance
passed as parameter until the envelope of the buffer does not intersects twice with the road. This avoids
getting envelopes where road finishing inside.
Parameters:
size (int): the desired size of the image. 300m as default
Returns:
MultiPoint: MultiPoint generated with all centroids in EPSG:4326
"""
_first = 0
centroids = []
wgs84_to_mercator = pyproj.Transformer.from_crs('EPSG:4326',
'EPSG:3857',
always_xy=True)
mercator_to_wgs84 = pyproj.Transformer.from_crs('EPSG:3857',
'EPSG:4326',
always_xy=True)
road_3857 = shapely_transform(wgs84_to_mercator.transform, self.path)
size_3857 = size / math.cos(math.pi * self.path.centroid.y / 180)
distance_3857 = size_3857 / 2
max_distance_3857 = road_3857.length - distance_3857
if size_3857 > road_3857.length:
centroids.append(
Centroid(
shapely_transform(mercator_to_wgs84.transform,
road_3857.centroid)))
while distance_3857 <= max_distance_3857:
centroid_3857 = road_3857.interpolate(distance_3857)
centroids.append(
Centroid(
shapely_transform(mercator_to_wgs84.transform,
centroid_3857)))
distance_3857 += size_3857
return centroids
def get_poly_area_geo(poly):
"""
Calculates the area in meters squared of the individual polygon
"""
minx, miny, maxx, maxy = poly.bounds
#reproject polygon to get area
reprojected_for_area = Proj(
"+proj=aea +lat_1={0} +lat_1={1} +lat_0={2} +lon_0={3}".format(
miny, maxy, (miny + maxy) / 2.0, (minx + maxx) / 2.0))
geographic_proj = Proj(init='epsg:4326')
project_func = partial(transform, geographic_proj, reprojected_for_area)
reprojected_poly = shapely_transform(project_func, poly)
return reprojected_poly.area
def get_poly_area_geo(poly):
"""
Calculates the area in meters squared of the individual polygon
"""
minx, miny, maxx, maxy = poly.bounds
#reproject polygon to get area
reprojected_for_area = Proj("+proj=aea +lat_1={0} +lat_1={1} +lat_0={2} +lon_0={3}".format(miny,
maxy,
(miny+maxy)/2.0,
(minx+maxx)/2.0))
geographic_proj = Proj(init='epsg:4326')
project_func = partial(transform,
geographic_proj,
reprojected_for_area)
reprojected_poly = shapely_transform(project_func, poly)
return reprojected_poly.area
def transform_geopandas(gdf, to_crs=wgs84, inplace=False):
"""Reprojects a geopandas dataframe.
Parameters
----------
gdf : geopandas.DataFrame
the dataframe to transform (must have a crs attribute)
to_crs : crs
the crs into which the dataframe must be transformed
inplace : bool
the original dataframe will be overwritten (default: False)
Returns
-------
A projected dataframe
"""
from_crs = check_crs(gdf.crs)
to_crs = check_crs(to_crs)
if inplace:
out = gdf
else:
out = gdf.copy()
if isinstance(to_crs, pyproj.Proj) and isinstance(from_crs, pyproj.Proj):
project = partial(transform_proj, from_crs, to_crs)
elif isinstance(to_crs, Grid):
project = partial(to_crs.transform, crs=from_crs)
elif isinstance(from_crs, Grid):
project = partial(from_crs.ij_to_crs, crs=to_crs)
else:
raise NotImplementedError()
# Do the job and set the new attributes
result = out.geometry.apply(lambda geom: shapely_transform(project, geom))
result.__class__ = gpd.GeoSeries
result.crs = to_crs
out.geometry = result
out.crs = to_crs
out['min_x'] = [g.bounds[0] for g in out.geometry]
out['max_x'] = [g.bounds[2] for g in out.geometry]
out['min_y'] = [g.bounds[1] for g in out.geometry]
out['max_y'] = [g.bounds[3] for g in out.geometry]
return out
def transform_geopandas(gdf, to_crs=wgs84, inplace=False):
"""Reprojects a geopandas dataframe.
Parameters
----------
gdf : geopandas.DataFrame
the dataframe to transform (must have a crs attribute)
to_crs : crs
the crs into which the dataframe must be transformed
inplace : bool
the original dataframe will be overwritten (default: False)
Returns
-------
A projected dataframe
"""
from_crs = check_crs(gdf.crs)
to_crs = check_crs(to_crs)
if inplace:
out = gdf
else:
out = gdf.copy()
if isinstance(to_crs, pyproj.Proj) and isinstance(from_crs, pyproj.Proj):
project = partial(transform_proj, from_crs, to_crs)
elif isinstance(to_crs, Grid):
project = partial(to_crs.transform, crs=from_crs)
else:
raise NotImplementedError()
# Do the job and set the new attributes
result = out.geometry.apply(lambda geom: shapely_transform(project, geom))
result.__class__ = gpd.GeoSeries
result.crs = to_crs
out.geometry = result
out.crs = to_crs
return out
def convert_to_vector_format(crs, output_dir, resolution,
input_file, output_crs, url, layer_name):
"""Convert raster to vector format (GPKG and GeoJSON)
File names are based on the raster file name.
:const float SMOOTHING_FACTOR: constant used for adjusting smoothing
of the result. Factor affects to the size of the smoothing kernel, which
is calculated from the smaller side of the result. Final kernel size is
rouded value of size * SMOOTHING_FACTOR, so the factor can be interpreted
as a proportion of the image size. If the smoothing kernel is lower than 1
pixel or bigger than the smaller side of image, smoothing is skipped.
Experimentally good value is 0.03. Value must be between 0 and 1.
:const float SIMPLIFICATION_FACTOR: constant used for calculating tolerance
for Douglas-Peucker simplification to simplify the result data.
Final tolerance is resolution * SIMPLIFICATION_FACTOR. The bigger
the factor, the rougher the output. Experimentally good value is 0.3.
Value must be positive.
:param CRS object crs: Contains information related to CRS
:param str output_dir: Path leading to directory where outputs are created
:param int resolution: Default resolution of the raster
:param str input_file: Path to the binary raster created in algorithm.solve
:param str output_crs: Coordinate system to be used for output file
:param str url: URL that is added as an attribute
:param str layer_name: layer_name that is added as an attribute
:return tuple: spatial extent of the data
"""
dst_layername = input_file.split('/')[-1].rsplit('.', 1)[0]
with rasterio.open(input_file, driver='GTiff', mode='r') as src:
image = src.read(1)
# Smooth output with median filter
SMOOTHING_FACTOR = 0.03
smooth_kernel_size = round( min(image.shape) * SMOOTHING_FACTOR )
if smooth_kernel_size > 1 and smooth_kernel_size < min(image.shape):
pixels = scipy.ndimage.median_filter(image,
(smooth_kernel_size, smooth_kernel_size),
mode='constant')
else:
pixels = image
# Mask value is 1, which means data
mask = pixels == 1
# Tolerance for douglas peucker simplification
SIMPLIFICATION_FACTOR = 0.3
if SIMPLIFICATION_FACTOR > 0:
tol = resolution / SIMPLIFICATION_FACTOR
else:
tol = 0
# Transformation initialization
if crs != output_crs:
tr = Transformer.from_crs(crs, output_crs,
always_xy=is_first_axis_east(output_crs)).transform
else:
tr = None
# Transformation and convertion from shapely shape to geojson-like object for fiona.
feats = []
feats_original_crs = []
for (s, v) in shapes(pixels, mask=mask, transform=src.transform):
shp = shape(s).simplify(tol)
feats_original_crs.append(shp)
if tr:
shp = shapely_transform(tr, shp)
feats.append(shp)
# Create multipolygon and add properties to it.
feature = MultiPolygon(feats)
result = {'geometry': mapping(feature), 'properties':
{'resolution': resolution, 'url': url, 'layer_name': layer_name}}
results_gpkg = ({'geometry': mapping(f), 'properties': {}} for f in feats)
# Geojson output
with fiona.open(
output_dir + dst_layername + ".geojson", 'w',
driver="GeoJSON",
crs=fiona.crs.from_string(output_crs.to_proj4()) if output_crs else src.crs,
schema={'geometry': feature.type, 'properties':
{'resolution': 'int', 'url': 'str', 'layer_name': 'str'}},
VALIDATE_OPEN_OPTIONS=False) as dst:
# GPKG output
with fiona.open(
output_dir + dst_layername + ".gpkg", 'w',
driver="GPKG",
crs=fiona.crs.from_string(output_crs.to_proj4()) if output_crs else src.crs,
schema={'geometry': 'Polygon', 'properties': {}}) as gpkg_dst:
# Write datasets
if len(feats) > 0:
dst.write(result)
gpkg_dst.writerecords(results_gpkg)
return MultiPolygon(feats_original_crs).bounds
def to_webmercator(pol):
return shapely_transform(webmercator_project, pol)
projection='merc',
ellps='WGS84',
lat_0=60.789785,
lon_0=-145.996703,
llcrnrlon=-169.49,
llcrnrlat=49.4,
urcrnrlon=-116.4,
urcrnrlat=71.63)
water = 'lightskyblue'
earth = 'cornsilk'
coast = mm.drawcoastlines()
continents = mm.fillcontinents(color=earth, lake_color=water)
bound = mm.drawmapboundary(fill_color=water)
countries = mm.drawcountries()
#merid = mm.drawmeridians(np.arange(-180, 180, 2), labels=[False, False, False, True])
#parall = mm.drawparallels(np.arange(0, 80), labels=[True, True, False, False])
juneau_lon, juneau_lat = -134.4167, 58.3
x, y = mm(juneau_lon, juneau_lat)
juneau = mm.scatter(x, y, 80, label="Juneau", color='red', zorder=10)
# construct a collection of polygon patches from shape points
district_patches = []
for district_shape in district_shapes:
transformed_points = transform_projection(district_shape.points, '3338')
y, x = zip(*transformed_points)
poly = Polygon(list(zip(x, y)))
mpoly = shapely_transform(mm, poly)
district_patches.append(PolygonPatch(mpoly))
ax.add_collection(PatchCollection(district_patches, match_original=True))
plt.show()
def _transform_shapely(self, target, from_proj, to_proj):
project = self.get_transformation_function(from_proj, to_proj)
return shapely_transform(project, target)