def __init__(self, fragments=None, taps=None, taps_strand='R', **kwargs):
CHICMolecule.__init__(self, fragments, **kwargs)
TAPSMolecule.__init__(self,
fragments=fragments,
taps_strand=taps_strand,
taps=taps,
**kwargs)
def write_tags_to_psuedoreads(self, reads):
CHICMolecule.write_tags_to_psuedoreads(self, reads)
TAPSMolecule.write_tags_to_psuedoreads(self, reads, call_super=False)
def __finalise__(self):
CHICMolecule.__finalise__(self)
TAPSMolecule.__finalise__(self)
def is_valid(self, set_rejection_reasons=False):
return CHICMolecule.is_valid(
self, set_rejection_reasons=set_rejection_reasons
) and TAPSMolecule.is_valid(
self, set_rejection_reasons=set_rejection_reasons)
def write_tags(self):
CHICMolecule.write_tags(self)
TAPSMolecule.write_tags(self)