def cleanup(f):
prefix = self.rule.workflow.default_remote_prefix
# remove constraints and turn this into a plain string
cleaned = strip_wildcard_constraints(f)
if (self.rule.workflow.default_remote_provider is not None
and f.startswith(prefix) and not is_flagged(f, "local")):
cleaned = f[len(prefix) + 1:]
cleaned = IOFile(cleaned, rule=self.rule)
else:
cleaned = IOFile(AnnotatedString(cleaned), rule=self.rule)
cleaned.clone_remote_object(f)
return cleaned
def cleanup(f):
prefix = self.rule.workflow.default_remote_prefix
# remove constraints and turn this into a plain string
cleaned = strip_wildcard_constraints(f)
modified_by = get_flag_value(f, PATH_MODIFIER_FLAG)
if (self.rule.workflow.default_remote_provider is not None
and f.startswith(prefix) and not is_flagged(f, "local")):
cleaned = f[len(prefix) + 1:]
cleaned = IOFile(cleaned, rule=self.rule)
else:
cleaned = IOFile(AnnotatedString(cleaned), rule=self.rule)
cleaned.clone_remote_object(f)
if modified_by is not None:
cleaned.flags[PATH_MODIFIER_FLAG] = modified_by
return cleaned
def wrapper(wildcards, **kwargs):
# no partial here, fail if anything left
return strip_wildcard_constraints(val).format(
**kwargs, **wildcards)
def benchmark(self):
return IOFile(strip_wildcard_constraints(self.rule.benchmark),
rule=self.rule)
