def __init__(self, db_name):
"""db_name: and Emsembl database name"""
if isinstance(db_name, EnsemblDbName):
db_name = db_name.Name
self.Name = db_name
self.Type = get_dbtype_from_name(db_name)
self.Prefix = get_db_prefix(db_name)
release, build = get_version_from_name(db_name)
self.Release = release
self.GeneralRelease = self.Release
if len(build) == 1:
if self.Type != 'compara':
self.Build = build[0]
else:
self.Build = None
self.GeneralRelease = build[0]
elif build:
self.Build = build[1]
self.GeneralRelease = build[0]
else:
self.Build = None
self.Species = None
self.Species = Species.getSpeciesName(self.Prefix)
def __init__(self, db_name):
"""db_name: and Emsembl database name"""
if isinstance(db_name, EnsemblDbName):
db_name = db_name.Name
self.Name = db_name
self.Type = get_dbtype_from_name(db_name)
self.Prefix = get_db_prefix(db_name)
release, build = get_version_from_name(db_name)
self.Release = release
self.GeneralRelease = self.Release
if len(build) == 1:
if self.Type != 'compara':
self.Build = build[0]
else:
self.Build = None
self.GeneralRelease = build[0]
elif build:
self.Build = build[1]
self.GeneralRelease = build[0]
else:
self.Build = None
self.Species = None
self.Species = Species.getSpeciesName(self.Prefix)
