def example1(subject): # subject = 'fsaverage5c' args = con.read_cmd_args(['-s', subject]) args.atlas = 'laus125' args.mat_fname = '/cluster/neuromind/npeled/linda/figure_file1.mat' args.mat_field = 'figure_file' args.windows = 1 args.stat = con.STAT_DIFF args.threshold_percentile = 99 args.conditions = ['task', 'rest'] con.save_rois_connectivity(subject, args)
def example2(subject): # subject = 'fsaverage5c' args = con.read_cmd_args(['-s', subject]) args.atlas = 'laus125' args.mat_fname = '/cluster/neuromind/npeled/linda/figure_file3.mat' args.mat_field = 'matrix_cognition_ratio_fpn_dmn' args.windows = 1 args.threshold = 0 args.norm_by_percentile = False args.symetric_colors = False args.color_map = 'YlOrRd' args.data_min = 0.15 args.data_max = 0.6 con.save_rois_connectivity(subject, args)