def test_starting_out(self):
translator = Translator((100, 100))
self.assertEqual(translator.global_origin_vector, Vector2D([50, 50]))
self.assertEqual(translator.spacing, 10)
translator = Translator((400, 400))
self.assertEqual(translator.spacing, 40)
def test_starting_out(self):
translator = Translator((100, 100))
v1 = Vector2D([1, 1])
translation1 = translator.translate(v1)
self.assertEqual(translation1, Vector2D([60, 40]))
v2 = Vector2D([-20, 0])
translation2 = translator.translate(v2)
self.assertEqual(translation2, Vector2D([-150, 50]))
def train(self, model: Seq2Seq, discriminator: Discriminator,
src_file_names: List[str], tgt_file_names: List[str],
unsupervised_big_epochs: int, print_every: int, save_every: int,
num_words_in_batch: int, max_length: int, teacher_forcing: bool,
save_file: str="model", n_unsupervised_batches: int=None,
enable_unsupervised_backtranslation: bool=False):
if self.main_optimizer is None or self.discriminator_optimizer is None:
logger.info("Initializing optimizers...")
self.main_optimizer = optim.Adam(filter(lambda p: p.requires_grad, model.parameters()),
lr=self.main_lr, betas=self.main_betas)
self.discriminator_optimizer = optim.RMSprop(discriminator.parameters(), lr=self.discriminator_lr)
for big_epoch in range(unsupervised_big_epochs):
src_batch_gen = BatchGenerator(src_file_names, num_words_in_batch, max_len=max_length,
vocabulary=self.vocabulary, language="src",
max_batch_count=n_unsupervised_batches)
tgt_batch_gen = BatchGenerator(tgt_file_names, num_words_in_batch, max_len=max_length,
vocabulary=self.vocabulary, language="tgt",
max_batch_count=n_unsupervised_batches)
logger.debug("Src batch:" + str(next(iter(src_batch_gen))))
logger.debug("Tgt batch:" + str(next(iter(tgt_batch_gen))))
timer = time.time()
main_loss_total = 0
discriminator_loss_total = 0
epoch = 0
for src_batch, tgt_batch in zip(src_batch_gen, tgt_batch_gen):
model.train()
discriminator_loss, losses = self.train_batch(model, discriminator, src_batch,
tgt_batch, teacher_forcing)
main_loss = sum(losses)
main_loss_total += main_loss
discriminator_loss_total += discriminator_loss
if epoch % save_every == 0 and epoch != 0:
save_model(model, discriminator, self.main_optimizer,
self.discriminator_optimizer, save_file + ".pt")
if epoch % print_every == 0 and epoch != 0:
main_loss_avg = main_loss_total / print_every
discriminator_loss_avg = discriminator_loss_total / print_every
main_loss_total = 0
discriminator_loss_total = 0
diff = time.time() - timer
timer = time.time()
translator = Translator(model, self.vocabulary, self.use_cuda)
logger.debug("Auto: " + translator.translate_sentence("you can prepare your meals here .",
"src", "src"))
logger.debug("Translated: " + translator.translate_sentence("you can prepare your meals here .",
"src", "tgt"))
logger.info('%s big epoch, %s epoch, %s sec, %.4f main loss, '
'%.4f discriminator loss, current losses: %s' %
(big_epoch, epoch, diff, main_loss_avg, discriminator_loss_avg, losses))
epoch += 1
save_model(model, discriminator, self.main_optimizer,
self.discriminator_optimizer, save_file + ".pt")
if enable_unsupervised_backtranslation:
self.current_translation_model = Translator(model, self.vocabulary, self.use_cuda)
model = copy.deepcopy(model)
def __init__(self, fileName):
self.prog = None
self.iProgLine = 0
self.symCommand = ""
self.binCommand = ""
self.nCommand = 0
self.isComment = False
self.symCommandType = -1
self.tranlator = Translator()
self.symTable = SymTable()
self.newFile = fileName + ".hack"
return None
def test_starting_out(self):
translator = Translator((100, 100))
v1 = Vector2D([1, 1])
self.assertTrue(translator.is_in_range(v1))
translator.update(Vector2D([10, 0]), 1)
self.assertFalse(translator.is_in_range(v1))
translator.update(Vector2D([0, 0]), 1)
v2 = Vector2D([0, 5])
self.assertTrue(translator.is_in_range(v2))
v2.y += 1
self.assertFalse(translator.is_in_range(v2))
def main():
logging.basicConfig(stream=sys.stdout, level=logging.DEBUG)
use_cuda = torch.cuda.is_available()
logging.info("Use CUDA: " + str(use_cuda))
_, _, vocabulary = collect_vocabularies(
src_vocabulary_path=opt.src_vocabulary,
tgt_vocabulary_path=opt.tgt_vocabulary,
all_vocabulary_path=opt.all_vocabulary,
reset=False)
if opt.src_to_tgt_dict is not None and opt.tgt_to_src_dict is not None:
translator = WordByWordModel(opt.src_to_tgt_dict, opt.tgt_to_src_dict,
vocabulary, opt.max_length)
else:
model, _, _, _ = load_model(opt.model, use_cuda)
translator = Translator(model, vocabulary, use_cuda)
input_filename = opt.input
output_filename = opt.output
lang = opt.lang
tgt_lang = "src" if lang == "tgt" else "tgt"
logging.info("Writing output...")
with open(input_filename, "r",
encoding="utf-8") as r, open(output_filename,
"w",
encoding="utf-8") as w:
for line in r:
translated = translator.translate_sentence(line, lang, tgt_lang)
logging.debug(translated)
w.write(translated + "\n")
def init_zero_supervised(vocabulary, save_file, use_cuda):
model, discriminator = build_model(
max_length=opt.max_length,
output_size=vocabulary.size(),
rnn_size=opt.rnn_size,
encoder_n_layers=opt.layers,
decoder_n_layers=opt.layers,
dropout=opt.dropout,
use_cuda=use_cuda,
enable_embedding_training=bool(opt.sv_embedding_training),
discriminator_hidden_size=opt.discriminator_hidden_size,
bidirectional=bool(opt.bidirectional),
use_attention=bool(opt.attention))
if opt.src_embeddings is not None:
load_embeddings(model,
src_embeddings_filename=opt.src_embeddings,
tgt_embeddings_filename=opt.tgt_embeddings,
vocabulary=vocabulary)
model = model.cuda() if use_cuda else model
discriminator = discriminator.cuda() if use_cuda else discriminator
print_summary(model)
trainer = Trainer(
vocabulary,
max_length=opt.max_length,
use_cuda=use_cuda,
discriminator_lr=opt.discriminator_lr,
main_lr=opt.sv_learning_rate,
main_betas=(opt.adam_beta1, 0.999),
)
if opt.sv_load_from:
model, discriminator, main_optimizer, discriminator_optimizer = load_model(
opt.sv_load_from, use_cuda)
trainer.main_optimizer = main_optimizer
trainer.discriminator_optimizer = discriminator_optimizer
else:
pair_file_names = [
(opt.train_src_bi, opt.train_tgt_bi),
]
trainer.train_supervised(model,
discriminator,
pair_file_names,
vocabulary,
num_words_in_batch=opt.sv_num_words_in_batch,
max_length=opt.max_length,
save_file=save_file,
big_epochs=opt.supervised_epochs,
print_every=opt.print_every,
save_every=opt.save_every,
max_batch_count=opt.n_supervised_batches)
for param in model.parameters():
param.requires_grad = False
return Translator(model, vocabulary, use_cuda)
def run(self, interface, **kwargs):
book = ChoseBook().run(interface, **kwargs)
if not book.are_all_words_processed():
interface.display_info(
"The book is not fully processed. Please firstly mark known words. "
)
return
translator = Translator()
unknown_words_cnt = len(book.unknown_words)
all_flashcards = defaultdict(list)
for idx, word in enumerate(book.unknown_words):
translation_units = translator.get_translation(word.stored_word)
prompt = self.get_translation_choice_prompt(
idx, unknown_words_cnt, translation_units)
multiple_input_processor = MultipleInputProcessor(
IntInRangeInputProcessor(valid_range=(0,
len(translation_units))))
choices = interface.get_input(
prompt, input_processor=multiple_input_processor)
for choice in choices:
chosen_translation_unit = translation_units[choice]
all_flashcards[", ".join(
chosen_translation_unit.words)].append(", ".join(
chosen_translation_unit.meanings))
word.mark_if_known(True)
all_flashcards_in_final_format = [
f"{key}={'/'.join(val)}" for key, val in all_flashcards.items()
]
book.flashcards.extend(all_flashcards_in_final_format)
db = Database()
db.store_book(book)
interface.display_info("FINISHED MAKING FLASHCARDS")
def test_starting_out(self):
translator = Translator((100, 100))
translator.update(Vector2D([0, 0]), 0.5)
self.assertEqual(translator.spacing, 5)
self.assertEqual(translator.local_origin_vector,
translator.global_origin_vector)
translator.update(Vector2D([5, 5]), 0.5)
self.assertEqual(translator.spacing, 5)
self.assertEqual(translator.local_origin_vector, Vector2D([75, 25]))
translator.update(Vector2D([5, 5]), 2)
self.assertEqual(translator.spacing, 20)
self.assertEqual(translator.local_origin_vector, Vector2D([150, -50]))
def train_supervised(self, model, discriminator, pair_file_names, vocabulary: Vocabulary, *, num_words_in_batch,
big_epochs, max_length, max_batch_count=None, save_every=100, print_every=100,
save_file="model"):
if self.main_optimizer is None:
logger.info("Initializing optimizers...")
self.main_optimizer = optim.Adam(filter(lambda p: p.requires_grad, model.parameters()),
lr=self.main_lr, betas=self.main_betas)
self.discriminator_optimizer = optim.RMSprop(discriminator.parameters(), lr=self.discriminator_lr)
for big_epoch in range(big_epochs):
batch_gen = BilingualBatchGenerator(pair_file_names, max_length, num_words_in_batch, vocabulary,
languages=["src", "tgt"], max_batch_count=max_batch_count)
timer = time.time()
loss_total = 0
epoch = 0
model.train()
for src_batch, tgt_batch in batch_gen:
logger.debug("Src batch: " + str(src_batch))
logger.debug("Tgt batch: " + str(tgt_batch))
loss = self.train_supervised_batch(model, src_batch, tgt_batch)
Batch.print_pair(src_batch, tgt_batch, self.vocabulary, "src-tgt")
logger.debug("Loss: " + str(loss))
loss_total += loss
if epoch % save_every == 0 and epoch != 0:
save_model(model, discriminator, self.main_optimizer, self.discriminator_optimizer,
save_file + "_supervised.pt")
if epoch % print_every == 0 and epoch != 0:
print_loss_avg = loss_total / print_every
loss_total = 0
diff = time.time() - timer
timer = time.time()
translator = Translator(model, self.vocabulary, self.use_cuda)
logger.debug("Translated: "+ translator.translate_sentence("you can prepare your meals here .", "src", "tgt"))
logger.info('%s big epoch, %s epoch, %s sec, %.4f main loss' %
(big_epoch, epoch, diff, print_loss_avg))
epoch += 1
save_model(model, discriminator, self.main_optimizer, self.discriminator_optimizer,
save_file + "_supervised.pt")
def test_starting_out(self):
translator = Translator((100, 100))
self.assertEqual(translator.global_origin_vector, Vector2D([50, 50]))
translator.update(Vector2D([10, 0]), 1)
self.assertEqual(translator.spacing, 10)
self.assertEqual(translator.local_origin_vector, Vector2D([150, 50]))
translator.update(Vector2D([5, 5]), 1)
self.assertEqual(translator.spacing, 10)
self.assertEqual(translator.local_origin_vector, Vector2D([100, 0]))
def main():
logging.basicConfig(level=logging.DEBUG)
logger = logging.getLogger("unmt")
logger.propagate = False
fh = logging.FileHandler(opt.log_file)
fh.setLevel(logging.DEBUG)
ch = logging.StreamHandler()
ch.setLevel(logging.INFO)
logger.addHandler(fh)
logger.addHandler(ch)
use_cuda = torch.cuda.is_available()
logger.info("Use CUDA: " + str(use_cuda))
_, _, vocabulary = collect_vocabularies(
src_vocabulary_path=opt.src_vocabulary,
tgt_vocabulary_path=opt.tgt_vocabulary,
all_vocabulary_path=opt.all_vocabulary,
src_file_names=(opt.train_src_mono, ),
tgt_file_names=(opt.train_tgt_mono, ),
src_max_words=opt.src_vocab_size,
tgt_max_words=opt.tgt_vocab_size,
reset=bool(opt.reset_vocabularies))
if opt.src_to_tgt_dict is not None and opt.tgt_to_src_dict is not None:
zero_model = WordByWordModel(opt.src_to_tgt_dict, opt.tgt_to_src_dict, vocabulary, opt.max_length)
elif opt.bootstrapped_model is not None:
model, discriminator, _, _ = load_model(opt.bootstrapped_model, use_cuda)
for param in model.parameters():
param.requires_grad = False
zero_model = Translator(model, vocabulary, use_cuda)
elif opt.train_src_bi is not None and opt.train_tgt_bi is not None:
zero_model = init_zero_supervised(vocabulary, opt.save_model, use_cuda)
else:
assert False, "Zero model was not initialized"
trainer = Trainer(vocabulary,
max_length=opt.max_length,
use_cuda=use_cuda,
discriminator_lr=opt.discriminator_lr,
main_lr=opt.learning_rate,
main_betas=(opt.adam_beta1, 0.999),)
trainer.current_translation_model = zero_model
model, discriminator = build_model(
max_length=opt.max_length,
output_size=vocabulary.size(),
rnn_size=opt.rnn_size,
encoder_n_layers=opt.layers,
decoder_n_layers=opt.layers,
dropout=opt.dropout,
use_cuda=use_cuda,
enable_embedding_training=bool(opt.usv_embedding_training),
discriminator_hidden_size=opt.discriminator_hidden_size,
bidirectional=bool(opt.bidirectional),
use_attention=bool(opt.attention)
)
if opt.src_embeddings is not None:
load_embeddings(model,
src_embeddings_filename=opt.src_embeddings,
tgt_embeddings_filename=opt.tgt_embeddings,
vocabulary=vocabulary)
model = model.cuda() if use_cuda else model
print_summary(model)
print_summary(discriminator)
discriminator = discriminator.cuda() if use_cuda else discriminator
if opt.usv_load_from:
model, discriminator, main_optimizer, discriminator_optimizer = load_model(opt.usv_load_from, use_cuda)
trainer.main_optimizer = main_optimizer
trainer.discriminator_optimizer = discriminator_optimizer
trainer.train(model, discriminator,
src_file_names=[opt.train_src_mono, ],
tgt_file_names=[opt.train_tgt_mono, ],
unsupervised_big_epochs=opt.unsupervised_epochs,
num_words_in_batch=opt.usv_num_words_in_batch,
print_every=opt.print_every,
save_every=opt.save_every,
save_file=opt.save_model,
n_unsupervised_batches=opt.n_unsupervised_batches,
enable_unsupervised_backtranslation=opt.enable_unsupervised_backtranslation,
teacher_forcing=bool(opt.teacher_forcing),
max_length=opt.max_length)
def __init__(self):
self.cal = Calculator()
self.data_maps = DataMaps()
self.translator = Translator()
class Parser:
def __init__(self, fileName):
self.prog = None
self.iProgLine = 0
self.symCommand = ""
self.binCommand = ""
self.nCommand = 0
self.isComment = False
self.symCommandType = -1
self.tranlator = Translator()
self.symTable = SymTable()
self.newFile = fileName + ".hack"
return None
def addData(self, data):
self.prog = data
return None
def advance(self):
# strip leading/trailing whitespaces, remove "/n" characters
currentLine = self.prog[self.iProgLine].strip()
self.iProgLine += 1
# do not parse empty lines and comments
if ('//' in currentLine):
i = currentLine.find('/')
currentLine = currentLine[:i].strip()
if ('/*' in currentLine and '*/' in currentLine):
i = currentLine.find('/')
j = currentLine[i+1:].find('/')
currentLine = (currentLine[:i] + currentLine[j+1:]).strip()
if ('/*' in currentLine):
self.isComment = True
return False
if ('*/' in currentLine):
self.isComment = False
return False
if (self.isComment):
return False
if (not currentLine):
return False
if (currentLine.startswith("(")):
return False
self.symCommand = currentLine
# select correct type of instruction
if (currentLine.startswith("@")):
self.symCommandType = cType.A_COMMAND
else:
self.symCommandType = cType.C_COMMAND
self.nCommand += 1
return True
def symbol(self):
value = ""
if (self.symCommandType == cType.A_COMMAND):
value = self.symCommand.strip("@")
if (not value.isdigit()):
if (self.symTable.contains(value)):
value = self.symTable.getAddress(value)
else:
value = self.symTable.addEntry(value)
return '{0:016b}'.format(int(value))
def instructions(self):
if (self.symCommandType != cType.C_COMMAND):
return ("", "", "")
i = self.symCommand.find('=')
j = self.symCommand.find(';')
if (i == -1 and j == -1):
dest = 'null'
comp = self.symCommand
jump = 'null'
return (dest, comp, jump)
if (i == -1):
dest = 'null'
comp = self.symCommand[:j]
jump = self.symCommand[j+1:]
return (dest, comp, jump)
if (j == -1):
dest = self.symCommand[:i]
comp = self.symCommand[i+1:]
jump = 'null'
return (dest, comp, jump)
dest = self.symCommand[:i]
comp = self.symCommand[i+1:j]
jump = self.symCommand[j+1:]
return (dest, comp, jump)
def commandToBinary(self):
if (self.symCommandType == cType.C_COMMAND):
(dest, comp, jump) = self.instructions()
cCommandBinary = self.tranlator.translate(dest, comp, jump)
return '111' + cCommandBinary
else:
return self.symbol()
def parse(self):
self.symTable.addData(self.prog)
self.symTable.findLabels()
hackFile = open(self.newFile, 'w')
while (self.iProgLine < len(self.prog)):
if (self.advance()):
binCommand = self.commandToBinary()
hackFile.write(binCommand)
hackFile.write("\n")
return
from typing import List
from src.translator import Translator
DEFAULT_BF_SOURCES = 'etc/hello_world.bf'
def read_sources(filename: str) -> List[str]:
"""read char by char a source file
:param filename: path to the source file
:return: its content as a list of char
"""
bf_sources: List[str] = []
with open(filename, 'r') as source:
for line in source:
[bf_sources.append(char) for char in line]
return bf_sources
if __name__ == '__main__':
sources = read_sources(DEFAULT_BF_SOURCES)
sources = Translator.sanitize(sources)
c_sources = Translator.bf_to_c(sources)
print(''.join(c_sources))
def runf1(conn, args):
# evaluation dataset
# english context so that answer is in english
data = MLQADataset(args.dataset, 'en', args.langQuestion)
# initialize searcher
init(conn, 'wiki', args)
# initialise reader
print("Reader")
reader = Reader(model="models/distilbert-base-uncased-distilled-squad/",
tokenizer="models/distilbert-uncased-my-tok")
# initialise translator
print("Translator")
languages = {args.langQuestion, args.langSearch, 'en'}
translator = Translator(languages)
print("Translating between: {}".format(str(languages)))
counters = {'f1': [], 'tally': 0, 'score': []}
for doc in data.get():
questionSearch = translator(doc['question'], args.langQuestion,
args.langSearch)
#print("questionSearch ", questionSearch.encode('utf-8'))
search(conn, questionSearch, args.langSearch)
if args.langSearch == 'en':
questionRead = questionSearch
else:
questionRead = translator(doc['question'], args.langQuestion, 'en')
#print("questionRead ", questionRead.encode('utf-8'))
# recv = {'search':[{'id':qid, 'docs':[{'context':'...', 'title':'...', 'score':score}]}]
bestScore = 0
recv = recvall(conn)
for n, docSearch in enumerate(recv['search'][0]['docs']):
# reader answer question given contexts
#print("n: ", n)
#print("contextSearch ", docSearch['context'].encode('utf-8'))
contextRead = translator(docSearch['context'], args.langSearch,
'en')
#print("contextRead ", contextRead.encode('utf-8'))
_, answerRead, score = reader(questionRead, contextRead)
if score >= bestScore:
bestScore = score
bestAnswer = answerRead
bestContext = contextRead
#print("goldAnswer: ",doc['answer'].encode('utf-8'))
#print("Answer: ",bestAnswer.encode('utf-8'))
counters['f1'].append(f1_drqa(bestAnswer, doc['answer']))
counters['tally'] += 1
counters['score'].append(bestScore)
# test
if args.stop != 0 and counters['tally'] >= args.stop:
print("Stoping at: ", counters['tally'])
break
#if i > 1:
# break
f1 = np.array(counters['f1'])
exact_match = f1[f1 == 1.0].sum() / f1.size
print("Exact match: {}".format(exact_match))
print("F1 mean: {}".format(f1.mean()))
print("Mean score: {}".format(sum(counters['score']) / counters['tally']))
print("Total: {}".format(counters['tally']))
if args.save_as:
print("Writing to: ", args.save_as)
with open(args.save_as, "w") as fp:
json.dump(counters, fp)
close(conn, args.stop_server)
return f1.mean()
def main_train():
# Build argument parser
parser = argparse.ArgumentParser(description='Train a table to text model')
# Training corpus
corpora_group = parser.add_argument_group('training corpora',
'Corpora related arguments; specify either unaligned or'
' aligned training corpora')
# "Languages (type,path)"
corpora_group.add_argument('--src_corpus_params', type=str,
default='table, ./data/processed_data/train/train.box',
help='the source unaligned corpus (type,path). Type = text/table')
corpora_group.add_argument('--trg_corpus_params', type=str,
default='text, ./data/processed_data/train/train.article',
help='the target unaligned corpus (type,path). Type = text/table')
corpora_group.add_argument('--src_para_corpus_params', type=str, default='',
help='the source corpus of parallel data(type,path). Type = text/table')
corpora_group.add_argument('--trg_para_corpus_params', type=str, default='',
help='the target corpus of parallel data(type,path). Type = text/table')
# Maybe add src/target type (i.e. text/table)
corpora_group.add_argument('--corpus_mode', type=str, default='mono',
help='training mode: "mono" (unsupervised) / "para" (supervised)')
corpora_group.add_argument('--max_sentence_length', type=int, default=50,
help='the maximum sentence length for training (defaults to 50)')
corpora_group.add_argument('--cache', type=int, default=100000,
help='the cache size (in sentences) for corpus reading (defaults to 1000000)')
# Embeddings/vocabulary
embedding_group = parser.add_argument_group('embeddings',
'Embedding related arguments; either give pre-trained embeddings,'
' or a vocabulary and embedding dimensionality to'
' randomly initialize them')
embedding_group.add_argument('--metadata_path', type=str, default='', required=True,
help='Path for bin file created in pre-processing phase, '
'containing BPEmb related metadata.')
# Architecture
architecture_group = parser.add_argument_group('architecture', 'Architecture related arguments')
architecture_group.add_argument('--layers', type=int, default=2,
help='the number of encoder/decoder layers (defaults to 2)')
architecture_group.add_argument('--hidden', type=int, default=600,
help='the number of dimensions for the hidden layer (defaults to 600)')
architecture_group.add_argument('--dis_hidden', type=int, default=150,
help='Number of dimensions for the discriminator hidden layers')
architecture_group.add_argument('--n_dis_layers', type=int, default=2,
help='Number of discriminator layers')
architecture_group.add_argument('--disable_bidirectional', action='store_true',
help='use a single direction encoder')
architecture_group.add_argument('--disable_backtranslation', action='store_true', help='disable backtranslation')
architecture_group.add_argument('--disable_field_loss', action='store_true', help='disable backtranslation')
architecture_group.add_argument('--disable_discriminator', action='store_true', help='disable discriminator')
architecture_group.add_argument('--shared_enc', action='store_true', help='share enc for both directions')
architecture_group.add_argument('--shared_dec', action='store_true', help='share dec for both directions')
# Denoising
denoising_group = parser.add_argument_group('denoising', 'Denoising related arguments')
denoising_group.add_argument('--denoising_mode', type=int, default=1, help='0/1/2 = disabled/old/new')
denoising_group.add_argument('--word_shuffle', type=int, default=3,
help='shuffle words (only relevant in new mode)')
denoising_group.add_argument('--word_dropout', type=float, default=0.1,
help='randomly remove words (only relevant in new mode)')
denoising_group.add_argument('--word_blank', type=float, default=0.2,
help='randomly blank out words (only relevant in new mode)')
# Optimization
optimization_group = parser.add_argument_group('optimization', 'Optimization related arguments')
optimization_group.add_argument('--batch', type=int, default=50, help='the batch size (defaults to 50)')
optimization_group.add_argument('--learning_rate', type=float, default=0.0002,
help='the global learning rate (defaults to 0.0002)')
optimization_group.add_argument('--dropout', metavar='PROB', type=float, default=0.3,
help='dropout probability for the encoder/decoder (defaults to 0.3)')
optimization_group.add_argument('--param_init', metavar='RANGE', type=float, default=0.1,
help='uniform initialization in the specified range (defaults to 0.1, 0 for module specific default initialization)')
optimization_group.add_argument('--iterations', type=int, default=300000,
help='the number of training iterations (defaults to 300000)')
# Model saving
saving_group = parser.add_argument_group('model saving', 'Arguments for saving the trained model')
saving_group.add_argument('--save', metavar='PREFIX', help='save models with the given prefix')
saving_group.add_argument('--save_interval', type=int, default=0, help='save intermediate models at this interval')
# Logging/validation
logging_group = parser.add_argument_group('logging', 'Logging and validation arguments')
logging_group.add_argument('--log_interval', type=int, default=100, help='log at this interval (defaults to 1000)')
logging_group.add_argument('--dbg_print_interval', type=int, default=1000,
help='log at this interval (defaults to 1000)')
logging_group.add_argument('--src_valid_corpus', type=str, default='')
logging_group.add_argument('--trg_valid_corpus', type=str, default='')
logging_group.add_argument('--print_level', type=str, default='info', help='logging level [debug | info]')
# Other
misc_group = parser.add_argument_group('misc', 'Misc. arguments')
misc_group.add_argument('--encoding', default='utf-8',
help='the character encoding for input/output (defaults to utf-8)')
misc_group.add_argument('--cuda', type=str, default='cpu', help='device for training. default value: "cpu"')
misc_group.add_argument('--bleu_device', type=str, default='',
help='device for calculating BLEU scores in case a validation dataset is given')
# Parse arguments
args = parser.parse_args()
logger = logging.getLogger()
if args.print_level == 'debug':
logging.basicConfig(stream=sys.stderr, level=logging.DEBUG)
elif args.print_level == 'info':
logging.basicConfig(stream=sys.stderr, level=logging.INFO)
elif args.print_level == 'warning':
logging.basicConfig(stream=sys.stderr, level=logging.WARNING)
else:
logging.basicConfig(stream=sys.stderr, level=logging.CRITICAL)
# Validate arguments
if args.src_corpus_params is None or args.trg_corpus_params is None:
print("Must supply corpus")
sys.exit(-1)
args.src_corpus_params = args.src_corpus_params.split(',')
args.trg_corpus_params = args.trg_corpus_params.split(',')
assert len(args.src_corpus_params) == 2
assert len(args.trg_corpus_params) == 2
src_type, src_corpus_path = args.src_corpus_params
trg_type, trg_corpus_path = args.trg_corpus_params
src_type = src_type.strip()
src_corpus_path = src_corpus_path.strip()
trg_type = trg_type.strip()
trg_corpus_path = trg_corpus_path.strip()
assert src_type != trg_type
assert (src_type in ['table', 'text']) and (trg_type in ['table', 'text'])
corpus_size = get_num_lines(src_corpus_path + '.content')
# Select device
if torch.cuda.is_available():
device = torch.device(args.cuda)
else:
device = torch.device('cpu')
if args.bleu_device == '':
args.bleu_device = device
current_time = str(datetime.datetime.now().timestamp())
run_dir = 'run_' + current_time + '/'
train_log_dir = 'logs/train/' + run_dir + args.save
valid_log_dir = 'logs/valid/' + run_dir + args.save
train_writer = SummaryWriter(train_log_dir)
valid_writer = SummaryWriter(valid_log_dir)
# Create optimizer lists
src2src_optimizers = []
trg2trg_optimizers = []
src2trg_optimizers = []
trg2src_optimizers = []
# Method to create a module optimizer and add it to the given lists
def add_optimizer(module, directions=()):
if args.param_init != 0.0:
for param in module.parameters():
param.data.uniform_(-args.param_init, args.param_init)
optimizer = torch.optim.Adam(module.parameters(), lr=args.learning_rate)
for direction in directions:
direction.append(optimizer)
return optimizer
assert os.path.isfile(args.metadata_path)
metadata = torch.load(args.metadata_path)
bpemb_en = metadata.init_bpe_module()
word_dict: BpeWordDict = torch.load(metadata.word_dict_path)
field_dict: LabelDict = torch.load(metadata.field_dict_path)
args.hidden = bpemb_en.dim + bpemb_en.dim // 2
if not args.disable_bidirectional:
args.hidden *= 2
# Load embedding and/or vocab
# word_dict = BpeWordDict.get(vocab=bpemb_en.words)
w_sos_id = {'text': word_dict.bos_index, 'table': word_dict.sot_index}
word_embeddings = nn.Embedding(len(word_dict), bpemb_en.dim, padding_idx=word_dict.pad_index)
nn.init.normal_(word_embeddings.weight, 0, 0.1)
nn.init.constant_(word_embeddings.weight[word_dict.pad_index], 0)
with torch.no_grad():
word_embeddings.weight[:bpemb_en.vs, :] = torch.from_numpy(bpemb_en.vectors)
word_embedding_size = word_embeddings.weight.data.size()[1]
word_embeddings = word_embeddings.to(device)
word_embeddings.weight.requires_grad = False
logger.debug('w_embeddings is running on cuda: %d', next(word_embeddings.parameters()).is_cuda)
# field_dict: LabelDict = torch.load('./data/processed_data/train/field.dict')
field_embeddings = nn.Embedding(len(field_dict), bpemb_en.dim // 2, padding_idx=field_dict.pad_index)
nn.init.normal_(field_embeddings.weight, 0, 0.1)
nn.init.constant_(field_embeddings.weight[field_dict.pad_index], 0)
field_embedding_size = field_embeddings.weight.data.size()[1]
field_embeddings = field_embeddings.to(device)
field_embeddings.weight.requires_grad = True
logger.debug('f_embeddings is running on cuda: %d', next(word_embeddings.parameters()).is_cuda)
src_encoder_word_embeddings = word_embeddings
trg_encoder_word_embeddings = word_embeddings
src_encoder_field_embeddings = field_embeddings
trg_encoder_field_embeddings = field_embeddings
src_decoder_word_embeddings = word_embeddings
trg_decoder_word_embeddings = word_embeddings
src_decoder_field_embeddings = field_embeddings
trg_decoder_field_embeddings = field_embeddings
src_generator = LinearGenerator(args.hidden, len(word_dict), len(field_dict)).to(device)
if args.shared_dec:
trg_generator = src_generator
add_optimizer(src_generator, (src2src_optimizers, trg2src_optimizers, trg2trg_optimizers, src2trg_optimizers))
else:
trg_generator = LinearGenerator(args.hidden, len(word_dict), len(field_dict)).to(device)
add_optimizer(src_generator, (src2src_optimizers, trg2src_optimizers))
add_optimizer(trg_generator, (trg2trg_optimizers, src2trg_optimizers))
logger.debug('src generator is running on cuda: %d', next(src_generator.parameters()).is_cuda)
logger.debug('trg generator is running on cuda: %d', next(src_generator.parameters()).is_cuda)
# Build encoder
src_enc = RNNEncoder(word_embedding_size=word_embedding_size, field_embedding_size=field_embedding_size,
hidden_size=args.hidden, bidirectional=not args.disable_bidirectional,
layers=args.layers, dropout=args.dropout).to(device)
if args.shared_enc:
trg_enc = src_enc
add_optimizer(src_enc, (src2src_optimizers, src2trg_optimizers, trg2trg_optimizers, trg2src_optimizers))
else:
trg_enc = RNNEncoder(word_embedding_size=word_embedding_size, field_embedding_size=field_embedding_size,
hidden_size=args.hidden, bidirectional=not args.disable_bidirectional,
layers=args.layers, dropout=args.dropout).to(device)
add_optimizer(src_enc, (src2src_optimizers, src2trg_optimizers))
add_optimizer(trg_enc, (trg2trg_optimizers, trg2src_optimizers))
logger.debug('encoder model is running on cuda: %d', next(src_enc.parameters()).is_cuda)
# Build decoders
src_dec = RNNAttentionDecoder(word_embedding_size=word_embedding_size,
field_embedding_size=field_embedding_size, hidden_size=args.hidden,
layers=args.layers, dropout=args.dropout, input_feeding=False).to(device)
if args.shared_dec:
trg_dec = src_dec
add_optimizer(src_dec, (src2src_optimizers, trg2src_optimizers, trg2trg_optimizers, src2trg_optimizers))
else:
trg_dec = RNNAttentionDecoder(word_embedding_size=word_embedding_size,
field_embedding_size=field_embedding_size, hidden_size=args.hidden,
layers=args.layers, dropout=args.dropout, input_feeding=False).to(device)
add_optimizer(src_dec, (src2src_optimizers, trg2src_optimizers))
add_optimizer(trg_dec, (trg2trg_optimizers, src2trg_optimizers))
logger.debug('decoder model is running on cuda: %d', next(src_dec.parameters()).is_cuda)
logger.debug('attention model is running on cuda: %d', next(src_dec.attention.parameters()).is_cuda)
discriminator = None
if (args.corpus_mode == 'mono') and not args.disable_discriminator:
discriminator = Discriminator(args.hidden, args.dis_hidden, args.n_dis_layers, args.dropout)
discriminator = discriminator.to(device)
# Build translators
src2src_translator = Translator("src2src",
encoder_word_embeddings=src_encoder_word_embeddings,
decoder_word_embeddings=src_decoder_word_embeddings,
encoder_field_embeddings=src_encoder_field_embeddings,
decoder_field_embeddings=src_decoder_field_embeddings,
generator=src_generator,
src_word_dict=word_dict, trg_word_dict=word_dict,
src_field_dict=field_dict, trg_field_dict=field_dict,
src_type=src_type, trg_type=src_type, w_sos_id=w_sos_id[src_type],
bpemb_en=bpemb_en, encoder=src_enc, decoder=src_dec, discriminator=discriminator,
denoising=args.denoising_mode, device=device,
max_word_shuffle_distance=args.word_shuffle,
word_dropout_prob=args.word_dropout,
word_blanking_prob=args.word_blank)
src2trg_translator = Translator("src2trg",
encoder_word_embeddings=src_encoder_word_embeddings,
decoder_word_embeddings=trg_decoder_word_embeddings,
encoder_field_embeddings=src_encoder_field_embeddings,
decoder_field_embeddings=trg_decoder_field_embeddings,
generator=trg_generator,
src_word_dict=word_dict, trg_word_dict=word_dict,
src_field_dict=field_dict, trg_field_dict=field_dict,
src_type=src_type, trg_type=trg_type, w_sos_id=w_sos_id[trg_type],
bpemb_en=bpemb_en, encoder=src_enc, decoder=trg_dec, discriminator=discriminator,
denoising=0, device=device,
max_word_shuffle_distance=args.word_shuffle,
word_dropout_prob=args.word_dropout,
word_blanking_prob=args.word_blank)
trg2trg_translator = Translator("trg2trg",
encoder_word_embeddings=trg_encoder_word_embeddings,
decoder_word_embeddings=trg_decoder_word_embeddings,
encoder_field_embeddings=trg_encoder_field_embeddings,
decoder_field_embeddings=trg_decoder_field_embeddings,
generator=trg_generator,
src_word_dict=word_dict, trg_word_dict=word_dict,
src_field_dict=field_dict, trg_field_dict=field_dict,
src_type=trg_type, trg_type=trg_type, w_sos_id=w_sos_id[trg_type],
bpemb_en=bpemb_en, encoder=trg_enc, decoder=trg_dec, discriminator=discriminator,
denoising=args.denoising_mode, device=device,
max_word_shuffle_distance=args.word_shuffle,
word_dropout_prob=args.word_dropout,
word_blanking_prob=args.word_blank)
trg2src_translator = Translator("trg2src",
encoder_word_embeddings=trg_encoder_word_embeddings,
decoder_word_embeddings=src_decoder_word_embeddings,
encoder_field_embeddings=trg_encoder_field_embeddings,
decoder_field_embeddings=src_decoder_field_embeddings,
generator=src_generator,
src_word_dict=word_dict, trg_word_dict=word_dict,
src_field_dict=field_dict, trg_field_dict=field_dict,
src_type=trg_type, trg_type=src_type, w_sos_id=w_sos_id[src_type],
bpemb_en=bpemb_en, encoder=trg_enc, decoder=src_dec, discriminator=discriminator,
denoising=0, device=device,
max_word_shuffle_distance=args.word_shuffle,
word_dropout_prob=args.word_dropout,
word_blanking_prob=args.word_blank)
# Build trainers
trainers = []
iters_per_epoch = int(np.ceil(corpus_size / args.batch))
print("CORPUS_SIZE = %d | BATCH_SIZE = %d | ITERS_PER_EPOCH = %d" % (corpus_size, args.batch, iters_per_epoch))
if args.corpus_mode == 'mono':
f_content = open(src_corpus_path + '.content', encoding=args.encoding, errors='surrogateescape')
f_labels = open(src_corpus_path + '.labels', encoding=args.encoding, errors='surrogateescape')
src_corpus_path = data.CorpusReader(f_content, f_labels, max_sentence_length=args.max_sentence_length,
cache_size=args.cache)
f_content = open(trg_corpus_path + '.content', encoding=args.encoding, errors='surrogateescape')
f_labels = open(trg_corpus_path + '.labels', encoding=args.encoding, errors='surrogateescape')
trg_corpus_path = data.CorpusReader(f_content, f_labels, max_sentence_length=args.max_sentence_length,
cache_size=args.cache)
if not args.disable_discriminator:
disc_trainer = DiscTrainer(device, src_corpus_path, trg_corpus_path, src_enc, trg_enc, src_encoder_word_embeddings,
src_encoder_field_embeddings, word_dict, field_dict, discriminator,
args.learning_rate, batch_size=args.batch)
trainers.append(disc_trainer)
src2src_trainer = Trainer(translator=src2src_translator, optimizers=src2src_optimizers, corpus=src_corpus_path,
batch_size=args.batch, iters_per_epoch=iters_per_epoch)
trainers.append(src2src_trainer)
if not args.disable_backtranslation:
trgback2src_trainer = Trainer(translator=trg2src_translator, optimizers=trg2src_optimizers,
corpus=data.BacktranslatorCorpusReader(corpus=src_corpus_path,
translator=src2trg_translator),
batch_size=args.batch, iters_per_epoch=iters_per_epoch)
trainers.append(trgback2src_trainer)
trg2trg_trainer = Trainer(translator=trg2trg_translator, optimizers=trg2trg_optimizers, corpus=trg_corpus_path,
batch_size=args.batch, iters_per_epoch=iters_per_epoch)
trainers.append(trg2trg_trainer)
if not args.disable_backtranslation:
srcback2trg_trainer = Trainer(translator=src2trg_translator, optimizers=src2trg_optimizers,
corpus=data.BacktranslatorCorpusReader(corpus=trg_corpus_path,
translator=trg2src_translator),
batch_size=args.batch, iters_per_epoch=iters_per_epoch)
trainers.append(srcback2trg_trainer)
elif args.corpus_mode == 'para':
fsrc_content = open(src_corpus_path + '.content', encoding=args.encoding, errors='surrogateescape')
fsrc_labels = open(src_corpus_path + '.labels', encoding=args.encoding, errors='surrogateescape')
ftrg_content = open(trg_corpus_path + '.content', encoding=args.encoding, errors='surrogateescape')
ftrg_labels = open(trg_corpus_path + '.labels', encoding=args.encoding, errors='surrogateescape')
corpus = data.CorpusReader(fsrc_content, fsrc_labels, trg_word_file=ftrg_content, trg_field_file=ftrg_labels,
max_sentence_length=args.max_sentence_length,
cache_size=args.cache)
src2trg_trainer = Trainer(translator=src2trg_translator, optimizers=src2trg_optimizers, corpus=corpus,
batch_size=args.batch, iters_per_epoch=iters_per_epoch)
trainers.append(src2trg_trainer)
# Build validators
if args.src_valid_corpus != '' and args.trg_valid_corpus != '':
with ExitStack() as stack:
src_content_vfile = stack.enter_context(open(args.src_valid_corpus + '.content', encoding=args.encoding,
errors='surrogateescape'))
src_labels_vfile = stack.enter_context(open(args.src_valid_corpus + '.labels', encoding=args.encoding,
errors='surrogateescape'))
trg_content_vfile = stack.enter_context(open(args.trg_valid_corpus + '.content', encoding=args.encoding,
errors='surrogateescape'))
trg_labels_vfile = stack.enter_context(open(args.trg_valid_corpus + '.labels', encoding=args.encoding,
errors='surrogateescape'))
src_content = src_content_vfile.readlines()
src_labels = src_labels_vfile.readlines()
trg_content = trg_content_vfile.readlines()
trg_labels = trg_labels_vfile.readlines()
assert len(src_content) == len(trg_content) == len(src_labels) == len(trg_labels), \
"Validation sizes do not match {} {} {} {}".format(len(src_content), len(trg_content), len(src_labels),
len(trg_labels))
src_content = [list(map(int, line.strip().split())) for line in src_content]
src_labels = [list(map(int, line.strip().split())) for line in src_labels]
trg_content = [list(map(int, line.strip().split())) for line in trg_content]
trg_labels = [list(map(int, line.strip().split())) for line in trg_labels]
cache = []
for src_sent, src_label, trg_sent, trg_label in zip(src_content, src_labels, trg_content, trg_labels):
if 0 < len(src_sent) <= args.max_sentence_length and 0 < len(trg_sent) <= args.max_sentence_length:
cache.append((src_sent, src_label, trg_sent, trg_label))
src_content, src_labels, trg_content, trg_labels = zip(*cache)
src2trg_validator = Validator(src2trg_translator, src_content, trg_content, src_labels, trg_labels)
if args.corpus_mode == 'mono':
src2src_validator = Validator(src2src_translator, src_content, src_content, src_labels, src_labels)
trg2src_validator = Validator(trg2src_translator, trg_content, src_content, trg_labels, src_labels)
trg2trg_validator = Validator(trg2trg_translator, trg_content, trg_content, trg_labels, trg_labels)
del src_content
del src_labels
del trg_content
del trg_labels
else:
src2src_validator = None
src2trg_validator = None
trg2src_validator = None
trg2trg_validator = None
# Build loggers
loggers = []
semi_loggers = []
if args.corpus_mode == 'mono':
if not args.disable_backtranslation:
loggers.append(Logger('Source to target (backtranslation)', srcback2trg_trainer, src2trg_validator,
None, args.encoding, short_name='src2trg_bt', train_writer=train_writer,
valid_writer=valid_writer))
loggers.append(Logger('Target to source (backtranslation)', trgback2src_trainer, trg2src_validator,
None, args.encoding, short_name='trg2src_bt', train_writer=train_writer,
valid_writer=valid_writer))
loggers.append(Logger('Source to source', src2src_trainer, src2src_validator, None, args.encoding,
short_name='src2src', train_writer=train_writer, valid_writer=valid_writer))
loggers.append(Logger('Target to target', trg2trg_trainer, trg2trg_validator, None, args.encoding,
short_name='trg2trg', train_writer=train_writer, valid_writer=valid_writer))
elif args.corpus_mode == 'para':
loggers.append(Logger('Source to target', src2trg_trainer, src2trg_validator, None, args.encoding,
short_name='src2trg_para', train_writer=train_writer, valid_writer=valid_writer))
# Method to save models
def save_models(name):
# torch.save(src2src_translator, '{0}.{1}.src2src.pth'.format(args.save, name))
# torch.save(trg2trg_translator, '{0}.{1}.trg2trg.pth'.format(args.save, name))
torch.save(src2trg_translator, '{0}.{1}.src2trg.pth'.format(args.save, name))
if args.corpus_mode == 'mono':
torch.save(trg2src_translator, '{0}.{1}.trg2src.pth'.format(args.save, name))
ref_string_path = args.trg_valid_corpus + '.str.content'
if not os.path.isfile(ref_string_path):
print("Creating ref file... [%s]" % (ref_string_path))
with ExitStack() as stack:
fref_content = stack.enter_context(
open(args.trg_valid_corpus + '.content', encoding=args.encoding, errors='surrogateescape'))
fref_str_content = stack.enter_context(
open(ref_string_path, mode='w', encoding=args.encoding, errors='surrogateescape'))
for line in fref_content:
ref_ids = [int(idstr) for idstr in line.strip().split()]
ref_str = bpemb_en.decode_ids(ref_ids)
fref_str_content.write(ref_str + '\n')
print("Ref file created!")
# Training
for curr_iter in range(1, args.iterations + 1):
print_dbg = (0 != args.dbg_print_interval) and (curr_iter % args.dbg_print_interval == 0)
for trainer in trainers:
trainer.step(print_dbg=print_dbg, include_field_loss=not args.disable_field_loss)
if args.save is not None and args.save_interval > 0 and curr_iter % args.save_interval == 0:
save_models('it{0}'.format(curr_iter))
if curr_iter % args.log_interval == 0:
print()
print('[{0}] TRAIN-STEP {1} x {2}'.format(args.save, curr_iter, args.batch))
for logger in loggers:
logger.log(curr_iter)
if curr_iter % iters_per_epoch == 0:
save_models('it{0}'.format(curr_iter))
print()
print('[{0}] VALID-STEP {1}'.format(args.save, curr_iter))
for logger in loggers:
if logger.validator is not None:
logger.validate(curr_iter)
model = '{0}.{1}.src2trg.pth'.format(args.save, 'it{0}'.format(curr_iter))
bleu_thread = threading.Thread(target=calc_bleu,
args=(model, args.save, args.src_valid_corpus, args.trg_valid_corpus + '.str.result',
ref_string_path, bpemb_en, curr_iter, args.bleu_device, valid_writer))
bleu_thread.start()
if args.cuda == args.bleu_device or args.bleu_device == 'cpu':
bleu_thread.join()
save_models('final')
train_writer.close()
valid_writer.close()
def main():
parser = argparse.ArgumentParser(description="translate.py")
parser.add_argument("--eval_splits", type=str, nargs="+", default=["val", ],
choices=["val", "test"], help="evaluate on val/test set, yc2 only has val")
parser.add_argument("--res_dir", required=True, help="path to dir containing model .pt file")
parser.add_argument("--batch_size", type=int, default=100, help="batch size")
# beam search configs
parser.add_argument("--use_beam", action="store_true", help="use beam search, otherwise greedy search")
parser.add_argument("--beam_size", type=int, default=2, help="beam size")
parser.add_argument("--n_best", type=int, default=1, help="stop searching when get n_best from beam search")
parser.add_argument("--min_sen_len", type=int, default=5, help="minimum length of the decoded sentences")
parser.add_argument("--max_sen_len", type=int, default=30, help="maximum length of the decoded sentences")
parser.add_argument("--block_ngram_repeat", type=int, default=0, help="block repetition of ngrams during decoding.")
parser.add_argument("--length_penalty_name", default="none",
choices=["none", "wu", "avg"], help="length penalty to use.")
parser.add_argument("--length_penalty_alpha", type=float, default=0.,
help="Google NMT length penalty parameter (higher = longer generation)")
parser.add_argument("--eval_tool_dir", type=str, default="./densevid_eval")
parser.add_argument("--no_cuda", action="store_true")
parser.add_argument("--seed", default=2019, type=int)
parser.add_argument("--debug", action="store_true")
opt = parser.parse_args()
opt.cuda = not opt.no_cuda
# random seed
random.seed(opt.seed)
np.random.seed(opt.seed)
torch.manual_seed(opt.seed)
checkpoint = torch.load(os.path.join(opt.res_dir, "model.chkpt"))
# add some of the train configs
train_opt = checkpoint["opt"] # EDict(load_json(os.path.join(opt.res_dir, "model.cfg.json")))
for k in train_opt.__dict__:
if k not in opt.__dict__:
setattr(opt, k, getattr(train_opt, k))
print("train_opt", train_opt)
decoding_strategy = "beam{}_lp_{}_la_{}".format(
opt.beam_size, opt.length_penalty_name, opt.length_penalty_alpha) if opt.use_beam else "greedy"
save_json(vars(opt),
os.path.join(opt.res_dir, "{}_eval_cfg.json".format(decoding_strategy)),
save_pretty=True)
if opt.dset_name == "anet":
reference_files_map = {
"val": [os.path.join(opt.data_dir, e) for e in
["anet_entities_val_1_para.json", "anet_entities_val_2_para.json"]],
"test": [os.path.join(opt.data_dir, e) for e in
["anet_entities_test_1_para.json", "anet_entities_test_2_para.json"]]}
else: # yc2
reference_files_map = {"val": [os.path.join(opt.data_dir, "yc2_val_anet_format_para.json")]}
for eval_mode in opt.eval_splits:
print("Start evaluating {}".format(eval_mode))
# add 10 at max_n_sen to make the inference stage use all the segments
eval_data_loader = get_data_loader(opt, eval_mode=eval_mode)
eval_references = reference_files_map[eval_mode]
# setup model
translator = Translator(opt, checkpoint)
pred_file = os.path.join(opt.res_dir, "{}_pred_{}.json".format(decoding_strategy, eval_mode))
pred_file = os.path.abspath(pred_file)
if not os.path.exists(pred_file):
json_res = run_translate(eval_data_loader, translator, opt=opt)
save_json(json_res, pred_file, save_pretty=True)
else:
print("Using existing prediction file at {}".format(pred_file))
# COCO language evaluation
lang_file = pred_file.replace(".json", "_lang.json")
eval_command = ["python", "para-evaluate.py", "-s", pred_file, "-o", lang_file,
"-v", "-r"] + eval_references
subprocess.call(eval_command, cwd=opt.eval_tool_dir)
# basic stats
stat_filepath = pred_file.replace(".json", "_stat.json")
eval_stat_cmd = ["python", "get_caption_stat.py", "-s", pred_file, "-r", eval_references[0],
"-o", stat_filepath, "-v"]
subprocess.call(eval_stat_cmd, cwd=opt.eval_tool_dir)
# repetition evaluation
rep_filepath = pred_file.replace(".json", "_rep.json")
eval_rep_cmd = ["python", "evaluateRepetition.py", "-s", pred_file,
"-r", eval_references[0], "-o", rep_filepath]
subprocess.call(eval_rep_cmd, cwd=opt.eval_tool_dir)
metric_filepaths = [lang_file, stat_filepath, rep_filepath]
all_metrics = merge_dicts([load_json(e) for e in metric_filepaths])
all_metrics_filepath = pred_file.replace(".json", "_all_metrics.json")
save_json(all_metrics, all_metrics_filepath, save_pretty=True)
print("pred_file {} lang_file {}".format(pred_file, lang_file))
print("[Info] Finished {}.".format(eval_mode))
from fastapi import FastAPI, HTTPException
from src.models import Answer
from src.qa_model import QAModel
from src.translator import Translator
app = FastAPI()
biobert_path = 'BioBertFolder/biobert_v1.0_pubmed_pmc/'
bert_fnn_weights = 'assets/models/bertffn_crossentropy/bertffn'
embedding_file = 'assets/Float16EmbeddingsExpanded5-27-19.pkl'
qa_model = QAModel(biobert_path, bert_fnn_weights, embedding_file)
translator = Translator(creds_path='gct_creds.json')
@app.get('/api/v1/ask', response_model=Answer)
async def ask(question: str, lang: str):
if lang == 'uk':
question = translator.translate(question, target="en")
# return only 1 answer
orig_result = qa_model.predict(question)[0]
trans_result = translator.translate(orig_result)
return {"original_answer": orig_result, "translated_answer": trans_result}
elif lang == "en":
result = qa_model.predict(question)[0]
return {"original_answer": result, "translated_answer": result}
else:
raise HTTPException(400, "Only uk(Ukrainian) and en(English) languages are supported!")
def eval_language_metrics(checkpoint,
eval_data_loader,
opt,
model=None,
eval_mode="val"):
"""eval_mode can only be set to `val` here, as setting to `test` is cheating
0, run inference
1, Get METEOR, BLEU1-4, CIDEr scores
2, Get vocab size, sentence length
"""
translator = Translator(opt, checkpoint, model=model)
json_res = run_translate(eval_data_loader, translator, opt=opt)
res_filepath = os.path.abspath(
opt.save_model + "_tmp_greedy_pred_{}.json".format(eval_mode))
save_json(json_res, res_filepath, save_pretty=True)
if opt.dset_name == "anet":
reference_files_map = {
"val": [
os.path.join(opt.data_dir, e) for e in [
"anet_entities_val_1_para.json",
"anet_entities_val_2_para.json"
]
],
"test": [
os.path.join(opt.data_dir, e) for e in [
"anet_entities_test_1_para.json",
"anet_entities_test_2_para.json"
]
]
}
else: # yc2
reference_files_map = {
"val":
[os.path.join(opt.data_dir, "yc2_val_anet_format_para.json")]
}
# COCO language evaluation
eval_references = reference_files_map[eval_mode]
lang_filepath = res_filepath.replace(".json", "_lang.json")
eval_cmd = [
"python", "para-evaluate.py", "-s", res_filepath, "-o", lang_filepath,
"-v", "-r"
] + eval_references
subprocess.call(eval_cmd, cwd=opt.eval_tool_dir)
# basic stats
stat_filepath = res_filepath.replace(".json", "_stat.json")
eval_stat_cmd = [
"python", "get_caption_stat.py", "-s", res_filepath, "-r",
eval_references[0], "-o", stat_filepath, "-v"
]
subprocess.call(eval_stat_cmd, cwd=opt.eval_tool_dir)
# repetition evaluation
rep_filepath = res_filepath.replace(".json", "_rep.json")
eval_rep_cmd = [
"python", "evaluateRepetition.py", "-s", res_filepath, "-r",
eval_references[0], "-o", rep_filepath
]
subprocess.call(eval_rep_cmd, cwd=opt.eval_tool_dir)
# save results
logger.info("Finished eval {}.".format(eval_mode))
metric_filepaths = [lang_filepath, stat_filepath, rep_filepath]
all_metrics = merge_dicts([load_json(e) for e in metric_filepaths])
all_metrics_filepath = res_filepath.replace(".json", "_all_metrics.json")
save_json(all_metrics, all_metrics_filepath, save_pretty=True)
return all_metrics, [res_filepath, all_metrics_filepath]
def get_json_from_translator(self, xml, prolog=None):
document_tree = DocumentTree(xml, prolog)
translator = Translator(document_tree, loads('{}'))
json = translator.get_json()
return json
from src.lexer import Lexer
from src.parser import Parser
import sys
import json
from src.translator import Translator
if len(sys.argv) == 3:
f = open(sys.argv[1], 'r')
content = f.read()
f = open(sys.argv[2], 'r')
config = json.loads(f.read())
lexer = Lexer(content)
parser = Parser(lexer)
document_tree = parser.get_document_tree()
translator = Translator(document_tree, config)
json = translator.get_json()
output_file = open("output.json", "w")
output_file.write(json)
output_file.close()
else:
print("Usage: python main.py <file_to_translate> <config_file>")
