コード例 #1
0
def test_immune_and_get_events2():
    config_path = os.path.join(os.path.dirname(__file__), "..", "src",
                               "config.json")
    Expected = -1
    with open(config_path) as json_data_file:
        ConfigData = json.load(json_data_file)
        paramsDataPath = ConfigData['ParamsFilePath']
    Params.load_from(os.path.join(os.path.dirname(__file__), "..", "src",
                                  paramsDataPath),
                     override=True)

    p = Person(30)
    ok,events =  p.immune_and_get_events(INITIAL_DATE , timedelta(days =  20), \
        ((DiseaseState.SUSCEPTIBLE,timedelta(10)),(DiseaseState.LATENT,timedelta(5)), \
        (DiseaseState.SUSCEPTIBLE,None)))
    assert len(events) == 3
    assert ok
    persons_arr = [p]
    env_arr = []
    small_world = world.World(all_people=persons_arr,
                              all_environments=env_arr,
                              generating_city_name="test",
                              generating_scale=1)

    my_simulation = Simulation(world=small_world,
                               initial_date=INITIAL_DATE,
                               interventions=[])
    for i in range(10):
        my_simulation.simulate_day()
    events[0].apply(simulation=my_simulation)
    assert p.get_disease_state() == DiseaseState.LATENT
    for i in range(5):
        my_simulation.simulate_day()
    events[1].apply(simulation=my_simulation)
    assert p.get_disease_state() == DiseaseState.IMMUNE
コード例 #2
0
def test_immune_and_get_events5():
    """
    Test that a person that is not Susptible nor latent when he should get immuned continues his 
    usual path to his death
    """
    config_path = os.path.join(os.path.dirname(__file__), "..", "src",
                               "config.json")
    Expected = -1
    with open(config_path) as json_data_file:
        ConfigData = json.load(json_data_file)
        paramsDataPath = ConfigData['ParamsFilePath']
    Params.load_from(os.path.join(os.path.dirname(__file__), "..", "src",
                                  paramsDataPath),
                     override=True)

    p = Person(30)
    ok, events =  p.immune_and_get_events(INITIAL_DATE , timedelta(days =  20), \
        ((DiseaseState.SUSCEPTIBLE,timedelta(10)),(DiseaseState.LATENT,timedelta(5)),\
        (DiseaseState.ASYMPTOMATICINFECTIOUS,timedelta(5)),(DiseaseState.DECEASED,timedelta(5)),(DiseaseState.DECEASED,None)))
    assert len(events) == 4
    assert ok == False
    persons_arr = [p]
    env_arr = []
    small_world = world.World(all_people=persons_arr,
                              all_environments=env_arr,
                              generating_city_name="test",
                              generating_scale=1)

    my_simulation = Simulation(world=small_world,
                               initial_date=INITIAL_DATE,
                               interventions=[])
    for i in range(10):
        my_simulation.simulate_day()
    events[0].apply(simulation=my_simulation)
    assert p.get_disease_state() == DiseaseState.LATENT
    for i in range(5):
        my_simulation.simulate_day()
    events[1].apply(simulation=my_simulation)
    assert p.get_disease_state() == DiseaseState.ASYMPTOMATICINFECTIOUS
    #Because this person was not susptible nor latent he cannot be immuned
    for i in range(5):
        my_simulation.simulate_day()
    events[2].apply(simulation=my_simulation)
    assert p.get_disease_state() == DiseaseState.DECEASED