コード例 #1
0
def create_random_suppressed(nms_thresh=.4, shape=(64, 65, 67), noise=.1, n_rays=32):
    prob, dist, rays = create_random_data(shape, noise, n_rays)

    points, probi, disti = non_maximum_suppression_3d(dist, prob, rays,
                                                      prob_thresh=0.9,
                                                      nms_thresh=nms_thresh,
                                                      verbose=True)
    return points, probi, disti, rays
コード例 #2
0
ファイル: test_nms3D.py プロジェクト: stardist/stardist
def test_nms_kdtree(nms_thresh=0.1, shape=(33, 44, 55), noise=.1, n_rays=32):
    prob, dist, rays = create_random_data(shape, noise, n_rays)
    points1, probi1, disti1 = non_maximum_suppression_3d(dist,
                                                         prob,
                                                         rays,
                                                         prob_thresh=0.9,
                                                         nms_thresh=nms_thresh,
                                                         use_kdtree=False,
                                                         verbose=True)
    points2, probi2, disti2 = non_maximum_suppression_3d(dist,
                                                         prob,
                                                         rays,
                                                         prob_thresh=0.9,
                                                         nms_thresh=nms_thresh,
                                                         use_kdtree=True,
                                                         verbose=True)
    assert np.allclose(points1, points2)
    assert np.allclose(probi1, probi2)
    assert np.allclose(disti1, disti2)
    return (points1, probi1, disti1), (points2, probi2, disti2)
コード例 #3
0
ファイル: test_nms3D.py プロジェクト: trasse/stardist
def test_nms():
    dist = 10 * np.ones((33, 44, 55, 32))
    prob = np.random.uniform(0, 1, dist.shape[:3])
    rays = Rays_GoldenSpiral(dist.shape[-1])

    points, probi, disti = non_maximum_suppression_3d(dist,
                                                      prob,
                                                      rays,
                                                      prob_thresh=0.8,
                                                      nms_thresh=0,
                                                      verbose=True)
    return points, rays, disti