def test_run_pipline(self):
tempdir = exec.stages(self.stages, self.subdirs, keep_data=True)
intensities = IntensityTable.load(
os.path.join(tempdir, "results", self.spots_file))
self.verify_results(intensities)
if os.getenv("TEST_KEEP_DATA") is None:
shutil.rmtree(tempdir)
def test_run_build(self):
exec.stages(TestWithBuildData.STAGES,
keep_data=("TEST_BUILD_KEEP_DATA" in os.environ))
def test_run_pipeline(self):
exec.stages(TestValidateCommand.STAGES)
def test_run_build(self):
exec.stages(TestHelpReturnCode.STAGES, keep_data=False)