def test_pvalue_decreases_with_increasing_power(self):
power1 = 2.0
power2 = 20.0
nspec = 1.0
pval1 = classical_pvalue(power1, nspec)
pval2 = classical_pvalue(power2, nspec)
assert pval1 - pval2 > 0.0
def test_pvalue_must_decrease_with_increasing_nspec(self):
power = 3.0
nspec1 = 1.0
nspec2 = 10.0
pval1 = classical_pvalue(power, nspec1)
pval2 = classical_pvalue(power, nspec2)
assert pval1 - pval2 > 0.0
def test_nspec_is_not_nan(self):
power = 2.0
nspec = np.nan
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_power_is_non_nan(self):
power = np.nan
nspec = 1
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_function_runs(self):
power = 2.0
nspec = 1.0
classical_pvalue(power, nspec)
def test_nspec_is_nonzero(self):
power = 2.0
nspec = 0.0
classical_pvalue(power, nspec)
def test_nspec_is_not_nan(self):
power = 2.0
nspec = np.nan
classical_pvalue(power, nspec)
def test_power_is_positive(self):
power = -2.0
nspec = 1.0
classical_pvalue(power, nspec)
def test_nspec_is_not_infinite(self):
power = 2.0
nspec = np.inf
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_nspec_is_an_integer_number(self):
power = 2.0
nspec = 2.5
classical_pvalue(power, nspec)
def test_nspec_is_nonzero(self):
power = 2.0
nspec = 0.0
classical_pvalue(power, nspec)
def test_nspec_is_positive(self):
power = 2.0
nspec = -1.0
classical_pvalue(power, nspec)
def test_nspec_is_not_nan(self):
power = 2.0
nspec = np.nan
classical_pvalue(power, nspec)
def test_nspec_is_not_infinite2(self):
power = 2.0
nspec = -np.inf
classical_pvalue(power, nspec)
def test_power_is_positive(self):
power = -2.0
nspec = 1.0
classical_pvalue(power, nspec)
def test_nspec_is_nonzero(self):
power = 2.0
nspec = 0.0
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_nspec_float_type_okay(self):
power = 2.0
nspec = 2.0
classical_pvalue(power, nspec)
def test_nspec_is_not_nan(self):
power = 2.0
nspec = np.nan
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_power_is_non_nan(self):
power = np.nan
nspec = 1
classical_pvalue(power, nspec)
def test_nspec_is_positive(self):
power = 2.0
nspec = -1.0
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_nspec_is_not_infinite2(self):
power = 2.0
nspec = -np.inf
classical_pvalue(power, nspec)
def test_nspec_is_nonzero(self):
power = 2.0
nspec = 0.0
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_nspec_is_positive(self):
power = 2.0
nspec = -1.0
classical_pvalue(power, nspec)
def test_nspec_is_an_integer_number(self):
power = 2.0
nspec = 2.5
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_nspec_is_an_integer_number(self):
power = 2.0
nspec = 2.5
classical_pvalue(power, nspec)
def test_nspec_float_type_okay(self):
power = 2.0
nspec = 2.0
classical_pvalue(power, nspec)
def test_power_is_not_infinite(self):
power = np.inf
nspec = 1
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_very_large_powers_produce_zero_prob(self):
power = 31000.0
nspec = 1
pval = classical_pvalue(power, nspec)
assert np.isclose(pval, 0.0)
def test_nspec_is_not_infinite2(self):
power = 2.0
nspec = -np.inf
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_function_runs(self):
power = 2.0
nspec = 1.0
classical_pvalue(power, nspec)
def test_nspec_is_positive(self):
power = 2.0
nspec = -1.0
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_power_is_not_infinite2(self):
power = -np.inf
nspec = 1
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_nspec_is_an_integer_number(self):
power = 2.0
nspec = 2.5
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_power_is_non_nan(self):
power = np.nan
nspec = 1
with pytest.raises(ValueError):
classical_pvalue(power, nspec)
def test_power_is_not_infinite2(self):
power = -np.inf
nspec = 1
classical_pvalue(power, nspec)
def test_power_is_non_nan(self):
power = np.nan
nspec = 1
classical_pvalue(power, nspec)
def test_very_large_powers_produce_zero_prob(self):
power = 31000.0
nspec = 1
pval = classical_pvalue(power, nspec)
assert np.isclose(pval, 0.0)
def test_power_is_not_infinite2(self):
power = -np.inf
nspec = 1
classical_pvalue(power, nspec)