def test_sample_scipy():
distribs_scipy = [
FiniteRV('F', {
1: S.Half,
2: Rational(1, 4),
3: Rational(1, 4)
}),
DiscreteUniform("Y", list(range(5))),
Die("D"),
Bernoulli("Be", 0.3),
Binomial("Bi", 5, 0.4),
BetaBinomial("Bb", 2, 1, 1),
Hypergeometric("H", 1, 1, 1),
Rademacher("R")
]
size = 3
scipy = import_module('scipy')
if not scipy:
skip('Scipy not installed. Abort tests for _sample_scipy.')
else:
for X in distribs_scipy:
samps = sample(X, size=size)
samps2 = sample(X, size=(2, 2))
for sam in samps:
assert sam in X.pspace.domain.set
for i in range(2):
for j in range(2):
assert samps2[i][j] in X.pspace.domain.set
def test_sampling_methods():
distribs_random = [DiscreteUniform("D", list(range(5)))]
distribs_scipy = [Hypergeometric("H", 1, 1, 1)]
distribs_pymc3 = [BetaBinomial("B", 1, 1, 1)]
size = 5
for X in distribs_random:
sam = X.pspace.distribution._sample_random(size)
for i in range(size):
assert sam[i] in X.pspace.domain.set
scipy = import_module('scipy')
if not scipy:
skip('Scipy not installed. Abort tests for _sample_scipy.')
else:
for X in distribs_scipy:
sam = X.pspace.distribution._sample_scipy(size)
for i in range(size):
assert sam[i] in X.pspace.domain.set
pymc3 = import_module('pymc3')
if not pymc3:
skip('PyMC3 not installed. Abort tests for _sample_pymc3.')
else:
for X in distribs_pymc3:
sam = X.pspace.distribution._sample_pymc3(size)
for i in range(size):
assert sam[i] in X.pspace.domain.set
def test_sample_scipy():
distribs_scipy = [
FiniteRV('F', {1: S.Half, 2: Rational(1, 4), 3: Rational(1, 4)}),
DiscreteUniform("Y", list(range(5))),
Die("D"),
Bernoulli("Be", 0.3),
Binomial("Bi", 5, 0.4),
BetaBinomial("Bb", 2, 1, 1),
Hypergeometric("H", 1, 1, 1),
Rademacher("R")
]
size = 3
numsamples = 5
scipy = import_module('scipy')
if not scipy:
skip('Scipy not installed. Abort tests for _sample_scipy.')
else:
with ignore_warnings(UserWarning): ### TODO: Restore tests once warnings are removed
h_sample = list(sample(Hypergeometric("H", 1, 1, 1), size=size, numsamples=numsamples))
assert len(h_sample) == numsamples
for X in distribs_scipy:
samps = next(sample(X, size=size))
samps2 = next(sample(X, size=(2, 2)))
for sam in samps:
assert sam in X.pspace.domain.set
for i in range(2):
for j in range(2):
assert samps2[i][j] in X.pspace.domain.set
def test_beta_binomial():
# verify parameters
raises(ValueError, lambda: BetaBinomial('b', .2, 1, 2))
raises(ValueError, lambda: BetaBinomial('b', 2, -1, 2))
raises(ValueError, lambda: BetaBinomial('b', 2, 1, -2))
assert BetaBinomial('b', 2, 1, 1)
# test numeric values
nvals = range(1, 5)
alphavals = [S(1) / 4, S.Half, S(3) / 4, 1, 10]
betavals = [S(1) / 4, S.Half, S(3) / 4, 1, 10]
for n in nvals:
for a in alphavals:
for b in betavals:
X = BetaBinomial('X', n, a, b)
assert E(X) == moment(X, 1)
assert variance(X) == cmoment(X, 2)
# test symbolic
n, a, b = symbols('a b n')
assert BetaBinomial('x', n, a, b)
n = 2 # Because we're using for loops, can't do symbolic n
a, b = symbols('a b', positive=True)
X = BetaBinomial('X', n, a, b)
t = Symbol('t')
assert E(X).expand() == moment(X, 1).expand()
assert variance(X).expand() == cmoment(X, 2).expand()
assert skewness(X) == smoment(X, 3)
assert characteristic_function(X)(t) == exp(2*I*t)*beta(a + 2, b)/beta(a, b) +\
2*exp(I*t)*beta(a + 1, b + 1)/beta(a, b) + beta(a, b + 2)/beta(a, b)
assert moment_generating_function(X)(t) == exp(2*t)*beta(a + 2, b)/beta(a, b) +\
2*exp(t)*beta(a + 1, b + 1)/beta(a, b) + beta(a, b + 2)/beta(a, b)