コード例 #1
0
ファイル: test_graph.py プロジェクト: Rainkikiki/taco
def test_is_topological_sort():
    G = Graph()
    G.add_path((G.SOURCE, 10, 20, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, G.SINK))
    G.add_path((G.SOURCE, 20, G.SINK))

    toposort = (G.SOURCE, 10, 30, 20, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert not G.is_topological_sort(order)
    toposort = (G.SOURCE, 20, 10, 30, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert not G.is_topological_sort(order)
    toposort = (G.SOURCE, 10, 20, 30, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert G.is_topological_sort(order)

    G = Graph()
    G.add_path((G.SOURCE, 10, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, 20, 40, G.SINK))

    toposort = (G.SOURCE, 10, 20, 30, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert G.is_topological_sort(order)
    toposort = (G.SOURCE, 10, 30, 20, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert G.is_topological_sort(order)
コード例 #2
0
ファイル: test_graph.py プロジェクト: yniknafs/taco
def test_is_topological_sort():
    G = Graph()
    G.add_path((G.SOURCE, 10, 20, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, G.SINK))
    G.add_path((G.SOURCE, 20, G.SINK))

    toposort = (G.SOURCE, 10, 30, 20, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert not G.is_topological_sort(order)
    toposort = (G.SOURCE, 20, 10, 30, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert not G.is_topological_sort(order)
    toposort = (G.SOURCE, 10, 20, 30, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert G.is_topological_sort(order)

    G = Graph()
    G.add_path((G.SOURCE, 10, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, 20, 40, G.SINK))

    toposort = (G.SOURCE, 10, 20, 30, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert G.is_topological_sort(order)
    toposort = (G.SOURCE, 10, 30, 20, 40, G.SINK)
    order = (G.node_id_map[x] for x in toposort)
    assert G.is_topological_sort(order)
コード例 #3
0
ファイル: test_graph.py プロジェクト: Rainkikiki/taco
def test_topological_sort():
    G = Graph()
    G.add_path((G.SOURCE, 10, 20, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, G.SINK))
    G.add_path((G.SOURCE, 20, G.SINK))
    assert G.is_topological_sort(G.topological_sort())
    t_dict, locus = read_single_locus('noc2l_locus.gtf')
    for sgraph in locus.create_splice_graphs():
        pgf = PathGraphFactory(sgraph)
        G = pgf.create(k=1)
        assert G.is_topological_sort(G.topological_sort())
        assert G.is_topological_sort(G.topological_sort_dfs())
コード例 #4
0
ファイル: test_graph.py プロジェクト: yniknafs/taco
def test_topological_sort():
    G = Graph()
    G.add_path((G.SOURCE, 10, 20, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, 30, 40, G.SINK))
    G.add_path((G.SOURCE, 10, G.SINK))
    G.add_path((G.SOURCE, 20, G.SINK))
    assert G.is_topological_sort(G.topological_sort())
    t_dict, locus = read_single_locus('noc2l_locus.gtf')
    for sgraph in locus.create_splice_graphs():
        pgf = PathGraphFactory(sgraph)
        G = pgf.create(k=1)
        assert G.is_topological_sort(G.topological_sort())
        assert G.is_topological_sort(G.topological_sort_dfs())