def resize_and_crop_boxes(self):
"""Resize boxes and crop it to the self._output dimension."""
boxlist = preprocessor.box_list.BoxList(self._boxes)
# boxlist is in range of [0, 1], so here we pass the scale_height/width
# instead of just scale.
boxes = preprocessor.box_list_scale(boxlist, self._scaled_height,
self._scaled_width).get()
# Adjust box coordinates based on the offset.
box_offset = tf.stack([
self._crop_offset_y,
self._crop_offset_x,
self._crop_offset_y,
self._crop_offset_x,
])
boxes -= tf.cast(tf.reshape(box_offset, [1, 4]), tf.float32)
# Clip the boxes.
boxes = self.clip_boxes(boxes)
# Filter out ground truth boxes that are illegal.
indices = tf.where(
tf.not_equal(
(boxes[:, 2] - boxes[:, 0]) * (boxes[:, 3] - boxes[:, 1]), 0))
boxes = tf.gather_nd(boxes, indices)
classes = tf.gather_nd(self._classes, indices)
return boxes, classes
def _stitch(features):
"""Stitch features on the first dimension."""
full_mask = tf.greater(features['task'], 1)
step_mask = tf.reduce_any(full_mask, axis=-1)
step_mask_exclude_last = tf.pad(step_mask, [[0, 0], [0, 1]],
constant_values=False)[:, 1:]
num_sequences = common_layers.shape_list(features['task'])[0]
num_steps = common_layers.shape_list(features['task'])[1]
connectors = tf.constant(PADDED_CONCATENATORS)
# Select connectors
connector_indices = tf.random.uniform([num_sequences * num_steps],
minval=0,
maxval=len(PADDED_CONCATENATORS),
dtype=tf.int32)
selected_connectors = tf.reshape(
tf.gather(connectors, connector_indices),
[num_sequences, num_steps,
len(PADDED_CONCATENATORS[0])])
selected_connectors = tf.multiply(selected_connectors,
tf.expand_dims(
tf.to_int32(step_mask_exclude_last),
2),
name='connector_mask')
features['task'] = tf.concat([features['task'], selected_connectors],
axis=-1)
ref_offsets = tf.expand_dims(
tf.cumsum(tf.reduce_sum(tf.to_int32(tf.greater(features['task'], 1)),
-1),
exclusive=True,
axis=-1), 2)
features['task'] = tf.reshape(features['task'], [num_sequences, -1])
full_mask = tf.greater(features['task'], 1)
full_mask_int = tf.to_int32(full_mask)
indices = tf.where(
tf.sequence_mask(lengths=tf.reduce_sum(full_mask_int, -1)))
values = tf.boolean_mask(tf.reshape(features['task'], [-1]),
tf.reshape(full_mask, [-1]))
sparse_task = tf.sparse.SparseTensor(indices=indices,
values=values,
dense_shape=tf.to_int64(
tf.shape(features['task'])))
# Stitch task and raw_task
stitched_features = {}
stitched_features['task'] = tf.sparse_tensor_to_dense(sparse_task)
max_len = tf.reduce_max(
tf.reduce_sum(tf.to_int32(tf.greater(stitched_features['task'], 1)),
-1))
stitched_features['task'] = stitched_features['task'][:, :max_len]
if 'raw_task' in features:
connector_strs = tf.reshape(
tf.gather(tf.constant(CONCATENATORS_STR), connector_indices),
[num_sequences, num_steps])
masked_connector_strs = tf.where(step_mask_exclude_last,
connector_strs,
tf.fill(tf.shape(connector_strs), ''))
stitched_features['raw_task'] = tf.strings.reduce_join(
tf.strings.reduce_join(tf.concat([
tf.expand_dims(features['raw_task'], 2),
tf.expand_dims(masked_connector_strs, 2)
],
axis=2),
axis=-1), -1)
# Stitch screen sequences
action_lengths = tf.reduce_sum(
tf.to_int32(
tf.greater(features['verb_refs'][:, :, 0, 1],
features['verb_refs'][:, :, 0, 0])), -1)
max_action_length = tf.reduce_max(action_lengths)
def _pad(tensor, padding_value=0):
shape_list = common_layers.shape_list(tensor)
assert len(shape_list) >= 2
padding_list = [[0, 0], [0, 1]] + [[0, 0]] * (len(shape_list) - 2)
return tf.pad(tensor[:, :max_action_length],
padding_list,
constant_values=padding_value)
for key in features.keys():
if key.endswith('_refs'):
features[key] = tf.squeeze(features[key], 2)
ref_mask = tf.expand_dims(
tf.to_int32(
tf.not_equal(features[key][:, :, 0], features[key][:, :,
1])), 2)
stitched_features[key] = tf.multiply((features[key] + ref_offsets),
ref_mask,
name='ref_mask')
stitched_features[key] = _pad(stitched_features[key])
elif key in [
'verbs', 'objects', 'consumed', 'obj_dom_pos', 'obj_text',
'obj_type', 'obj_clickable', 'obj_screen_pos', 'verb_refs',
'obj_refs', 'input_refs', 'obj_dom_dist'
]:
features[key] = tf.squeeze(features[key], 2)
stitched_features[key] = features[key]
stitched_features[key] = _pad(
stitched_features[key],
padding_value=-1 if key == 'obj_type' else 0)
elif key not in ['task', 'raw_task']:
stitched_features[key] = features[key][:, 0]
# Append eos to 'task'
stitched_features['task'] = tf.pad(stitched_features['task'],
[[0, 0], [0, 1]])
task_mask = tf.to_int32(tf.greater(stitched_features['task'], 1))
task_eos_mask = tf.pad(task_mask, [[0, 0], [1, 0]],
constant_values=1)[:, :-1]
stitched_features['task'] = stitched_features['task'] + (task_eos_mask -
task_mask)
# Append eos
verb_mask = tf.to_int32(tf.greater(stitched_features['verbs'], 1))
verb_eos_mask = tf.pad(verb_mask, [[0, 0], [1, 0]],
constant_values=1)[:, :-1]
verb_eos = verb_eos_mask - verb_mask
stitched_features['verbs'] = stitched_features['verbs'] + verb_eos
# Append last step refs to 'verb_refs'
task_lengths = tf.where(tf.equal(stitched_features['task'], 1))[:, 1]
eos_pos = tf.to_int32(tf.stack([task_lengths, task_lengths + 1], axis=1))
action_mask = tf.to_int32(
tf.sequence_mask(action_lengths, max_action_length + 1))
action_and_eos_mask = tf.pad(action_mask, [[0, 0], [1, 0]],
constant_values=1)[:, :-1]
verb_ref_eos = action_and_eos_mask - action_mask
eos_refs = tf.multiply(tf.tile(tf.expand_dims(eos_pos, 1),
[1, max_action_length + 1, 1]),
tf.expand_dims(verb_ref_eos, 2),
name='verb_ref_eos')
stitched_features['verb_refs'] += eos_refs
return stitched_features
def create_training_ops(
self,
phi_all,
values,
target_values,
advantages,
deltas_training,
delta_sums_training,
pieces_training,
old_probs,
params,
):
clip_param, c1, c2, c3, c4, e = params["clipping_parameter"], params[
"value_loss"], params["policy_loss"], params[
"entropy_loss"], params["impossibility_loss"], 10**-6
#current phi(a|s)
p_mask = tf.reshape(tf.one_hot(pieces_training[:, :], self.n_pieces),
(-1, 1, 1, self.n_pieces),
name='p_mask')
values = tf.reduce_sum(values * p_mask, axis=[2, 3])
phi = tf.reduce_sum(phi_all * p_mask, axis=3, keepdims=True)
delta_phi = phi * tf.cast(deltas_training, tf.float32)
delta_sum_phi = phi * tf.cast(delta_sums_training, tf.float32)
probability = (tf.reduce_sum(delta_phi, axis=[1, 2]) +
e) / (tf.reduce_sum(delta_sum_phi, axis=[1, 2]) + e)
#probability ratio
r = tf.maximum(probability, e) / tf.maximum(old_probs, e)
clipped_r = tf.clip_by_value(r, 1 - clip_param, 1 + clip_param)
r_saturation = tf.reduce_mean(
tf.cast(tf.not_equal(r, clipped_r), tf.float32))
advnorm = adv_normalizer(0.01, safety=2.0, clip_val=4.0)
if self.settings["compress_advantages"]:
advantages = advnorm(advantages)
policy_loss = tf.minimum(r * advantages, clipped_r * advantages)
#impossibility loss
impossibility_loss_tf = phi * (
1 - tf.minimum(1.0, tf.cast(delta_sums_training, tf.float32)))
#entropy
entropy_bonus = action_entropy = N.action_entropy(
delta_sum_phi /
tf.reduce_sum(tf.cast(delta_sums_training, tf.float32) + e,
axis=[
1,
2,
3,
],
keepdims=True) + e)
#tally up
self.value_loss_tf = c1 * tf.losses.mean_squared_error(
values, target_values) #reduce loss
self.policy_loss_tf = -c2 * tf.reduce_mean(
policy_loss) #increase expected advantages
self.entropy_loss_tf = -c3 * tf.reduce_mean(
entropy_bonus) #increase entropy
self.impossibility_loss_tf = c4 * tf.reduce_mean(impossibility_loss_tf)
self.regularizer_tf = self.settings["nn_regularizer"] * tf.add_n(
[tf.nn.l2_loss(v) for v in self.main_net.variables])
self.loss_tf = self.value_loss_tf + self.policy_loss_tf + self.impossibility_loss_tf + self.entropy_loss_tf + self.regularizer_tf
training_ops = self.settings["optimizer"](
learning_rate=params['lr']).minimize(self.loss_tf)
#Stats: we like stats.
self.output_as_stats(action_entropy, name='entropy')
self.output_as_stats(entropy_bonus,
name='entropy_bonus',
only_mean=True)
self.output_as_stats(values, name='values')
self.output_as_stats(target_values, name='target_values')
self.output_as_stats(r_saturation,
name='clip_saturation',
only_mean=True)
self.output_as_stats(advnorm.a_mean,
name='advantage_compressor',
only_mean=True)
self.output_as_stats(advnorm.a_max,
name='advantage_compressor_max',
only_mean=True)
self.output_as_stats(advnorm.a_saturation,
name='advantage_compressor_saturation',
only_mean=True)
self.output_as_stats(self.loss_tf, name='tot_loss', only_mean=True)
self.output_as_stats(self.value_loss_tf,
name='value_loss',
only_mean=True)
self.output_as_stats(-self.policy_loss_tf,
name='policy_loss',
only_mean=True)
self.output_as_stats(-self.entropy_loss_tf,
name='entropy_loss',
only_mean=True)
self.output_as_stats(self.impossibility_loss_tf,
name='impossibility_loss',
only_mean=True)
self.output_as_stats(self.regularizer_tf,
name='reg_loss',
only_mean=True)
self.output_as_stats(params["entropy_loss"],
name='params/entropy_loss_weight',
only_mean=True)
for param_name in params:
self.output_as_stats(params[param_name],
name='params/' + param_name,
only_mean=True)
return [training_ops, advnorm.update_op]
def build_bert_inputs(example):
"""Convert example <Tensor [30, 70]> into bert inputs."""
k_size = FLAGS.k_size
CLS_ID = tf.constant([101], dtype=tf.int64) # pylint: disable=invalid-name
SEP_ID = tf.constant([102], dtype=tf.int64) # pylint: disable=invalid-name
max_len = tf.constant([FLAGS.max_para_length])
context_size = tf.constant([FLAGS.context_size])
intermediate_examples_tensor = tf.reduce_sum(tf.abs(example), 1)
examples_zero_vector = tf.zeros(shape=(1, 1), dtype=tf.int64)
examples_bool_mask = tf.squeeze(
tf.not_equal(intermediate_examples_tensor, examples_zero_vector))
paragraph_len = tf.reduce_sum(tf.cast(examples_bool_mask, tf.int32))
start = tf.random.uniform([1],
0,
tf.reshape(paragraph_len, []) -
tf.reshape(context_size, []) + 1,
dtype=tf.int32)
# Slice the document into the before, after and context.
# Discard the zero padding.
sizes = tf.squeeze(
tf.concat([[
start, context_size, paragraph_len - context_size - start,
max_len - paragraph_len
]], 0))
before, context, after, _ = tf.split(example, sizes, axis=0)
# Gather the context removing zero padding at end of sentences.
non_zeros = tf.where(tf.not_equal(context, tf.zeros_like(context)))
context_gathered = tf.gather_nd(context, non_zeros)
# Flip before so we select the 4 sentences closest to target
before = tf.reverse(before, axis=[0])
# pad both to longer than needed
paddings = tf.constant([[0, 8], [0, 0]])
before = tf.pad(before, paddings)
after = tf.pad(after, paddings)
# Extend targets to 3 sentences
# pad both
before_minus_one = before[1:][:k_size]
before_minus_two = before[2:][:k_size]
after_plus_one = after[1:][:k_size]
after_plus_two = after[2:][:k_size]
before = before[:k_size]
after = after[:k_size]
before = tf.concat([before_minus_two, before_minus_one, before], axis=1)
after = tf.concat([after, after_plus_one, after_plus_two], axis=1)
############################################################################
# These 8 sentences are the 8 surrounding targets. Some are padding.
targets = tf.concat([before, after], axis=0)
# Remove the padding from the sourrounding sentences
# Eg. if context starts at beginning of paragraph, before is all padding
intermediate_tensor = tf.reduce_sum(tf.abs(targets), 1)
zero_vector = tf.zeros(shape=(1, 1), dtype=tf.int64)
bool_mask = tf.squeeze(tf.not_equal(intermediate_tensor, zero_vector))
bool_mask.set_shape([None])
targets = tf.boolean_mask(targets, bool_mask)
# Randomly select 4 targets
# We will also select the label_types for each selected target
indices = tf.range(0, limit=tf.shape(targets)[0], dtype=tf.int32)
shuffled_indices = tf.random.shuffle(indices)[:k_size]
targets = tf.gather(targets, shuffled_indices)
if k_size == 4:
full_labels = tf.concat([tf.range(3, -1, -1), tf.range(4, 8)], axis=0)
elif k_size == 3:
full_labels = tf.concat([tf.range(2, -1, -1), tf.range(3, 6)], axis=0)
elif k_size == 2:
full_labels = tf.concat([tf.range(1, -1, -1), tf.range(2, 4)], axis=0)
elif k_size == 1:
full_labels = tf.concat([tf.range(0, -1, -1), tf.range(1, 2)], axis=0)
label_types = tf.boolean_mask(full_labels, bool_mask)
label_types = tf.gather(label_types, shuffled_indices)
# create inputs
bert_inputs = []
input_masks = []
segment_ids = []
# make context
ctx_segment_id = tf.concat([
tf.zeros_like(CLS_ID, dtype=tf.int64),
tf.zeros_like(context_gathered),
tf.zeros_like(SEP_ID, dtype=tf.int64)
],
axis=0)
ctx_segment_id = pad_and_cut(ctx_segment_id, FLAGS.max_seq_length)
segment_ids.append(ctx_segment_id)
new_ctx_input = tf.concat([CLS_ID, context_gathered, SEP_ID], axis=0)
ctx_input_mask = tf.ones_like(new_ctx_input)
ctx_input_mask = pad_and_cut(ctx_input_mask, FLAGS.max_seq_length)
input_masks.append(ctx_input_mask)
padded_new_ctx_input = pad_and_cut(new_ctx_input, FLAGS.max_seq_length)
bert_inputs.append(padded_new_ctx_input)
for i in range(k_size):
target_non_zero = tf.where(
tf.not_equal(targets[i], tf.zeros_like(targets[i])))
targets_stripped = tf.gather_nd(targets[i], target_non_zero)
if FLAGS.include_context:
segment_id = tf.concat([
tf.zeros_like(CLS_ID, dtype=tf.int64),
tf.zeros_like(context_gathered),
tf.zeros_like(SEP_ID, dtype=tf.int64),
tf.ones_like(targets_stripped),
tf.ones_like(SEP_ID, dtype=tf.int64)
],
axis=0)
else:
segment_id = tf.concat([
tf.zeros_like(CLS_ID, dtype=tf.int64),
tf.zeros_like(targets_stripped),
tf.zeros_like(SEP_ID, dtype=tf.int64)
],
axis=0)
segment_id = pad_and_cut(segment_id, FLAGS.max_seq_length)
segment_ids.append(segment_id)
if FLAGS.include_context:
new_input = tf.concat(
[CLS_ID, context_gathered, SEP_ID, targets_stripped, SEP_ID], axis=0)
else:
new_input = tf.concat([CLS_ID, targets_stripped, SEP_ID], axis=0)
input_mask = tf.ones_like(new_input)
input_mask = pad_and_cut(input_mask, FLAGS.max_seq_length)
input_masks.append(input_mask)
padded_new_input = pad_and_cut(new_input, FLAGS.max_seq_length)
bert_inputs.append(padded_new_input)
bert_inputs = tf.stack(bert_inputs, axis=0)
input_masks = tf.stack(input_masks, axis=0)
segment_ids = tf.stack(segment_ids, axis=0)
out = Outputs_And_Context(bert_inputs, input_masks, segment_ids, label_types,
context_gathered)
return out
def detection_loss(cls_outputs, box_outputs, labels, params):
"""Computes total detection loss.
Computes total detection loss including box and class loss from all levels.
Args:
cls_outputs: an OrderDict with keys representing levels and values
representing logits in [batch_size, height, width, num_anchors].
box_outputs: an OrderDict with keys representing levels and values
representing box regression targets in [batch_size, height, width,
num_anchors * 4].
labels: the dictionary that returned from dataloader that includes
groundtruth targets.
params: the dictionary including training parameters specified in
default_haprams function in this file.
Returns:
total_loss: an integer tensor representing total loss reducing from
class and box losses from all levels.
cls_loss: an integer tensor representing total class loss.
box_loss: an integer tensor representing total box regression loss.
box_iou_loss: an integer tensor representing total box iou loss.
"""
# Sum all positives in a batch for normalization and avoid zero
# num_positives_sum, which would lead to inf loss during training
num_positives_sum = tf.reduce_sum(labels['mean_num_positives']) + 1.0
levels = cls_outputs.keys()
cls_losses = []
box_losses = []
box_iou_losses = []
for level in levels:
if params['data_format'] == 'channels_first':
labels['cls_targets_%d' % level] = tf.transpose(
labels['cls_targets_%d' % level], [0, 3, 1, 2])
labels['box_targets_%d' % level] = tf.transpose(
labels['box_targets_%d' % level], [0, 3, 1, 2])
# Onehot encoding for classification labels.
cls_targets_at_level = tf.one_hot(labels['cls_targets_%d' % level],
params['num_classes'])
if params['data_format'] == 'channels_first':
bs, _, width, height, _ = cls_targets_at_level.get_shape().as_list(
)
cls_targets_at_level = tf.reshape(cls_targets_at_level,
[bs, -1, width, height])
else:
bs, width, height, _, _ = cls_targets_at_level.get_shape().as_list(
)
cls_targets_at_level = tf.reshape(cls_targets_at_level,
[bs, width, height, -1])
box_targets_at_level = labels['box_targets_%d' % level]
cls_loss = _classification_loss(cls_outputs[level],
cls_targets_at_level,
num_positives_sum,
alpha=params['alpha'],
gamma=params['gamma'])
if params['data_format'] == 'channels_first':
cls_loss = tf.reshape(
cls_loss, [bs, -1, width, height, params['num_classes']])
else:
cls_loss = tf.reshape(
cls_loss, [bs, width, height, -1, params['num_classes']])
cls_loss *= tf.cast(
tf.expand_dims(tf.not_equal(labels['cls_targets_%d' % level], -2),
-1), tf.float32)
cls_losses.append(tf.reduce_sum(cls_loss))
box_losses.append(
_box_loss(box_outputs[level],
box_targets_at_level,
num_positives_sum,
delta=params['delta']))
if params['iou_loss_type']:
box_iou_losses.append(
_box_iou_loss(box_outputs[level], box_targets_at_level,
num_positives_sum, params['iou_loss_type']))
# Sum per level losses to total loss.
cls_loss = tf.add_n(cls_losses)
box_loss = tf.add_n(box_losses)
box_iou_loss = tf.add_n(box_iou_losses) if box_iou_losses else 0
total_loss = (cls_loss + params['box_loss_weight'] * box_loss +
params['iou_loss_weight'] * box_iou_loss)
return total_loss, cls_loss, box_loss, box_iou_loss
def add_distance_loss_to_center(labels, logits, groundtruth_coords):
"""Add distance loss function for ClickRegression."""
weights = tf.to_int32(
tf.not_equal(
labels,
model_input.dataset_descriptors[FLAGS.dataset].ignore_label))
labels *= weights
# Use GT box to get center if it exists. Less computation required.
# Otherwise, calculate from label mask.
if FLAGS.use_groundtruth_box:
center_x = (groundtruth_coords['xmin'] +
groundtruth_coords['xmax']) / 2.0
center_y = (groundtruth_coords['ymin'] +
groundtruth_coords['ymax']) / 2.0
center = tf.stack([center_y, center_x], axis=1)
else:
# Make array of coordinates (each row contains three coordinates)
ii, jj = tf.meshgrid(tf.range(FLAGS.image_size),
tf.range(FLAGS.image_size),
indexing='ij')
coords = tf.stack([tf.reshape(ii, (-1, )),
tf.reshape(jj, (-1, ))],
axis=-1)
coords = tf.cast(coords, tf.int32)
# Rearrange input into one vector per volume
volumes_flat = tf.reshape(
labels, [-1, FLAGS.image_size * FLAGS.image_size * 1, 1])
# Compute total mass for each volume. Add 0.00001 to prevent division by 0
total_mass = tf.cast(tf.reduce_sum(volumes_flat, axis=1),
tf.float32) + ZERO_DIV_OFFSET
# Compute centre of mass
center = tf.cast(tf.reduce_sum(volumes_flat * coords, axis=1),
tf.float32) / total_mass
center = center / FLAGS.image_size
# Normalize coordinates by size of image
logits = logits / FLAGS.image_size
# Calculate loss based on the distance metric specified
# Loss added later in model_fn by tf.losses.get_total_loss()
if FLAGS.distance_metric == 'mse':
tf.losses.mean_squared_error(center, logits)
elif FLAGS.distance_metric in [
'euclidean', 'euclidean_sqrt', 'euclidean_iter'
]:
distance_to_center = tf.sqrt(
tf.reduce_sum(tf.square(logits - center), axis=-1) +
ZERO_DIV_OFFSET)
if FLAGS.ratio_box_distance:
distance_to_box = calc_distance_to_edge(groundtruth_coords, logits)
box_distance_to_center = (tf.to_float(distance_to_center) -
distance_to_box)
loss = distance_to_center / (box_distance_to_center +
ZERO_DIV_OFFSET)
else:
loss = distance_to_center
if FLAGS.distance_metric == 'euclidean_sqrt':
loss = tf.sqrt(loss)
if FLAGS.distance_metric == 'euclidean_iter':
iter_num = tf.to_float(tf.train.get_or_create_global_step())
step = (iter_num // FLAGS.euclidean_step) + 1.0
loss = tf.pow(loss, tf.to_float(1.0 / step))
tf.losses.compute_weighted_loss(loss)
def map_fn(x):
"""Internal function to flat_map over.
Consumes a batch of input examples and produces a variable number of output
examples.
Args:
x: a single example
Returns:
a tf.data.Dataset
"""
partial = empty_example.copy()
i = tf.zeros([], dtype=tf.int32)
first_key, *_ = keys
dynamic_batch_size = tf.shape(x[first_key])[0]
outputs = {}
for k in keys:
outputs[k] = tf.TensorArray(tf.int32,
size=0,
dynamic_size=True,
element_shape=[length[k]])
outputs[k + "_position"] = tf.TensorArray(
tf.int32, size=0, dynamic_size=True, element_shape=[length[k]])
def cond_fn(i, partial, outputs):
del partial, outputs
return i < dynamic_batch_size
def body_fn(i, partial, outputs):
"""Body function for while_loop.
Args:
i: integer scalar
partial: dictionary of Tensor (partially-constructed example)
outputs: dictionary of TensorArray
Returns:
A triple containing the new values of the inputs.
"""
can_append = True
one_example = {}
for k in keys:
val = tf.cast(x[k][i], tf.int32)
val = val[:tf.
reduce_sum(tf.cast(tf.not_equal(val, 0), tf.int32))]
one_example[k] = val
for k in keys:
can_append = tf.logical_and(
can_append,
tf.less_equal(
tf.size(partial[k]) + tf.size(one_example[k]),
length[k]))
def false_fn():
return write_packed_example(partial, outputs)
def true_fn():
return partial, outputs
partial, outputs = tf.cond(can_append, true_fn, false_fn)
new_partial = {}
for k in keys:
new_seq = one_example[k][:length[k]]
new_seq_len = tf.size(new_seq)
new_partial[k] = tf.concat([partial[k], new_seq], 0)
new_partial[k + "_position"] = tf.concat([
partial[k + "_position"],
tf.range(new_seq_len, dtype=tf.int32)
], 0)
partial = new_partial
return i + 1, partial, outputs
i, partial, outputs = tf.while_loop(
cond_fn,
body_fn, (i, partial, outputs),
back_prop=False,
shape_invariants=(
tf.TensorShape([]),
{k: tf.TensorShape([None])
for k in keys_etc},
{k: tf.TensorShape(None)
for k in keys_etc},
))
partial, outputs = write_packed_example(partial, outputs)
packed = {k: outputs[k].stack() for k in keys_etc}
for k in keys:
packed[k + "_segmentation"] = (tf.cumsum(
tf.cast(tf.equal(packed[k + "_position"], 0), tf.int32),
axis=1) * tf.cast(tf.not_equal(packed[k], 0), tf.int32))
return packed
def call(self,
input_tensor,
label_ids,
positions=None,
label_weights=None,
padding_token_id=None,
mlm_is_entity_mask=None,
mlm_is_not_entity_mask=None):
"""Get loss and log probs for the masked LM."""
if padding_token_id is not None:
pad_mask = tf.cast(tf.not_equal(label_ids, padding_token_id),
tf.float32)
if label_weights is not None:
if padding_token_id is not None:
label_weights *= pad_mask
else:
if padding_token_id is not None:
label_weights = pad_mask
else:
label_weights = tf.ones_like(label_ids, tf.float32)
if positions is not None:
input_tensor = gather_indexes(input_tensor, positions)
else:
input_tensor = tf.reshape(input_tensor, [-1, self.hidden_size])
input_tensor.set_shape([None, self.hidden_size])
with tf.variable_scope('cls/predictions'):
with tf.variable_scope('transform'):
input_tensor = self.linear_fn(input_tensor)
input_tensor = self.layer_norm(input_tensor)
logits = tf.matmul(input_tensor,
self.output_weights,
transpose_b=True)
logits = tf.nn.bias_add(logits, self.output_bias)
log_probs = tf.nn.log_softmax(logits, axis=-1)
batch_size = tf.shape(label_ids)[0]
mlm_labels_per_sample = tf.shape(label_ids)[1]
label_ids_flattened = tf.reshape(label_ids, [-1])
label_weights_flattened = tf.reshape(label_weights, [-1])
one_hot_labels = tf.one_hot(label_ids_flattened,
depth=self.vocab_size,
dtype=tf.float32)
# The `positions` tensor might be zero-padded (if the sequence is too
# short to have the maximum number of predictions). The `label_weights`
# tensor has a value of 1.0 for every real prediction and 0.0 for the
# padding predictions.
per_example_loss = -tf.reduce_sum(log_probs * one_hot_labels,
axis=[-1])
mlm_predictions = tf.argmax(log_probs,
axis=-1,
output_type=tf.int32)
loss = tf.reduce_sum(
label_weights_flattened *
per_example_loss) / (tf.reduce_sum(label_weights) + 1e-5)
def weighted_sum_per_sample(values1, values2, weights):
weights_per_sample = tf.reduce_sum(weights, 1)
weights_denominator = weights_per_sample + 1e-5
return (tf.reduce_sum(values1 * weights, 1) /
weights_denominator,
tf.reduce_sum(values2 * weights, 1) /
weights_denominator, weights_per_sample)
mlm_loss = tf.reshape(per_example_loss,
[batch_size, mlm_labels_per_sample])
mlm_accuracy = tf.reshape(
tf.cast(tf.equal(mlm_predictions, label_ids_flattened),
tf.float32), [batch_size, mlm_labels_per_sample])
(mlm_loss_per_sample, mlm_accuracy_per_sample,
mlm_weight_per_sample) = weighted_sum_per_sample(
mlm_loss, mlm_accuracy, label_weights)
if mlm_is_entity_mask is not None:
(mlm_loss_per_entity_sample, mlm_accuracy_per_entity_sample,
mlm_weight_per_entity_sample) = weighted_sum_per_sample(
mlm_loss, mlm_accuracy,
label_weights * mlm_is_entity_mask)
else:
mlm_loss_per_entity_sample = None
mlm_accuracy_per_entity_sample = None
mlm_weight_per_entity_sample = None
if mlm_is_not_entity_mask is not None:
(mlm_loss_per_non_entity_sample,
mlm_accuracy_per_non_entity_sample,
mlm_weight_per_non_entity_sample) = weighted_sum_per_sample(
mlm_loss, mlm_accuracy,
label_weights * mlm_is_not_entity_mask)
else:
mlm_loss_per_non_entity_sample = None
mlm_accuracy_per_non_entity_sample = None
mlm_weight_per_non_entity_sample = None
return LanguageModelOutput(
loss=loss,
mlm_predictions=mlm_predictions,
mlm_loss_per_sample=mlm_loss_per_sample,
mlm_accuracy_per_sample=mlm_accuracy_per_sample,
mlm_weight_per_sample=mlm_weight_per_sample,
mlm_loss_per_entity_sample=mlm_loss_per_entity_sample,
mlm_accuracy_per_entity_sample=mlm_accuracy_per_entity_sample,
mlm_weight_per_entity_sample=mlm_weight_per_entity_sample,
mlm_loss_per_non_entity_sample=mlm_loss_per_non_entity_sample,
mlm_accuracy_per_non_entity_sample=
mlm_accuracy_per_non_entity_sample,
mlm_weight_per_non_entity_sample=mlm_weight_per_non_entity_sample)
def __init__(self, item_num, args, reuse=None):
self.args = args
self.is_training = tf.placeholder(tf.bool, shape=())
self.input_seq = tf.placeholder(tf.int32, shape=(None, args.maxlen))
self.pos = tf.placeholder(tf.int32, shape=None)
self.exemplar_logits = tf.placeholder(tf.float32, shape=(None, None))
self.exemplar_pos = tf.placeholder(tf.int32, shape=None)
self.max_item = tf.placeholder(tf.int32, shape=())
self.lr = tf.placeholder(tf.float32, shape=())
self.dropout_rate = tf.placeholder(tf.float32, shape=())
pos = self.pos
mask = tf.expand_dims(tf.to_float(tf.not_equal(self.input_seq, 0)), -1)
with tf.variable_scope("SASRec", reuse=reuse):
# sequence embedding, item embedding table
self.seq, item_emb_table = embedding(self.input_seq,
vocab_size=item_num + 1,
num_units=args.hidden_units,
zero_pad=True,
scale=True,
l2_reg=args.l2_emb,
scope="input_embeddings",
with_t=True,
reuse=reuse
)
# # Positional Encoding
t, pos_emb_table = embedding(
tf.tile(tf.expand_dims(tf.range(tf.shape(self.input_seq)[1]), 0), [tf.shape(self.input_seq)[0], 1]),
vocab_size=args.maxlen,
num_units=args.hidden_units,
zero_pad=False,
scale=False,
l2_reg=args.l2_emb,
scope="dec_pos",
reuse=reuse,
with_t=True
)
self.seq += t
# Dropout
self.seq = tf.layers.dropout(self.seq,
rate=self.dropout_rate,
training=tf.convert_to_tensor(self.is_training),
seed=args.random_seed)
self.seq *= mask
# Build blocks
for i in range(args.num_blocks):
with tf.variable_scope("num_blocks_%d" % i):
# Self-attention
self.seq = multihead_attention(queries=normalize(self.seq),
keys=self.seq,
num_units=args.hidden_units,
num_heads=args.num_heads,
dropout_rate=self.dropout_rate,
seed=args.random_seed,
is_training=self.is_training,
causality=True,
scope="self_attention")
# Feed forward
self.seq = feedforward(normalize(self.seq), num_units=[args.hidden_units, args.hidden_units],
dropout_rate=self.dropout_rate, is_training=self.is_training,
seed=args.random_seed)
self.seq *= mask
self.seq = normalize(self.seq)
# find representation
self.rep = self.seq[:, -1, :]
# define loss
seq_emb = tf.reshape(self.rep, [tf.shape(self.input_seq)[0], args.hidden_units])
indices = pos - 1
self.labels = tf.one_hot(indices, self.max_item)
item_emb = tf.nn.embedding_lookup(item_emb_table, tf.range(1, self.max_item + 1))
self.logits = tf.matmul(seq_emb, tf.transpose(item_emb))
self.loss = tf.reduce_mean(tf.nn.softmax_cross_entropy_with_logits(labels=self.labels, logits=self.logits))
self.global_step = tf.Variable(0, name='global_step', trainable=False)
self.optimizer = tf.train.AdamOptimizer(learning_rate=self.lr)
# prediction
self.test_item = tf.placeholder(tf.int32, shape=None)
self.test_item_emb = tf.nn.embedding_lookup(item_emb_table, self.test_item)
self.test_logits = tf.matmul(seq_emb, tf.transpose(self.test_item_emb))
self.test_logits = tf.reshape(self.test_logits, [tf.shape(self.input_seq)[0], tf.shape(self.test_item)[0]])
self.pred_last = tf.argsort(tf.argsort(-self.test_logits))
def c(i, j, k):
return tf.equal(
tf.not_equal(tf.less(i + j, 10), tf.less(j * k, 100)),
tf.greater_equal(k, i + j))
def body(self,
features,
decode_step=None,
cache=None,
decoding_stats=None,
add_summary=True):
encoder_output = None
extra_losses = []
padding_bias = None
if not self.hparams.fast_decode:
decode_step = None
if "inputs" in features:
inputs = features["inputs"]
# remove the last two dimensions that are always 1.
inputs = tf.reshape(
inputs,
utils.shape_list(inputs)[:2] + [self.hidden_size])
# Padding bias only used for seq2seq models.
padding_bias = utils.embedding_to_padding(inputs)
# Mask random positions
shape = utils.shape_list(inputs)
if self.hparams.input_dropout:
inputs = tf.where(
tf.random.uniform(shape) < self.hparams.input_dropout,
tf.zeros_like(inputs), inputs)
if self.hparams.add_timing_signal:
inputs += utils.get_timing_signal_1d(self.hparams.max_length,
self.hidden_size)
if cache is not None and -1 in cache:
encoder_output = cache[-1]
else:
encoder_output = utils.transformer_encoder_layers(
inputs=inputs,
num_layers=self.num_encoder_layers,
hparams=self.hparams,
losses=extra_losses,
name="encoder",
token_bias=features.get("token_bias_inputs"),
padding_bias=padding_bias)
if cache is not None and -1 not in cache:
cache[-1] = encoder_output
targets = tf.to_int32(features["targets"])
# remove the last two dimensions that are always 1.
targets = tf.reshape(targets, utils.shape_list(targets)[:2])
# Clamp targets to max_target_length
targets = targets[:, :self.hparams.max_target_length]
if self.is_decode:
targets = self.process_partial_targets_decoding(targets)
decoder_input = self.prepare_decoder(targets)
decoder_output = utils.transformer_decoder_layers(
inputs=decoder_input,
num_layers=self.num_decoder_layers,
hparams=self.hparams,
encoder_output=encoder_output,
decode_step=decode_step,
losses=extra_losses,
cache=cache,
name="decoder",
decoding_stats=decoding_stats,
token_bias_inputs=features.get("token_bias_inputs"),
token_bias_targets=features.get("token_bias_targets"),
padding_bias=padding_bias)
logits = self.produce_output(decoder_output)
# Return logits as-is in decoding mode
if self.is_decode:
return logits
# Add cross entropy loss
one_hot_targets = tf.one_hot(tf.cast(targets, dtype=tf.int32),
self.vocab_size)
x_entropy = tf.nn.softmax_cross_entropy_with_logits_v2(
labels=one_hot_targets, logits=logits)
weights = tf.to_float(tf.not_equal(targets, 0))
loss = tf.reduce_sum(x_entropy * weights) / tf.reduce_sum(weights)
if add_summary:
tf.summary.scalar("losses/weight", tf.reduce_sum(weights))
tf.summary.scalar("losses/x_entropy",
tf.reduce_sum(x_entropy * weights))
loss_dict = {"training": loss}
if extra_losses:
loss_dict["extra_loss"] = tf.add_n(extra_losses)
# hack for T2T metrics
logits = tf.reshape(
logits,
utils.shape_list(logits)[:2] + [1, 1] +
utils.shape_list(logits)[-1:])
return logits, loss_dict
def compute_loss(self, y_true, y_pred):
"""Compute mutlibox loss.
# Arguments
y_true: Ground truth targets,
tensor of shape (?, num_boxes, 4 + num_classes + 8),
priors in ground truth are fictitious,
y_true[:, :, -8] has 1 if prior should be penalized
or in other words is assigned to some ground truth box,
y_true[:, :, -7:] are all 0.
y_pred: Predicted logits,
tensor of shape (?, num_boxes, 4 + num_classes + 8).
# Returns
loss: Loss for prediction, tensor of shape (?,).
"""
batch_size = tf.shape(y_true)[0]
num_boxes = tf.to_float(tf.shape(y_true)[1])
# loss for all priors
conf_loss = self._softmax_loss(y_true[:, :, 4:-8], y_pred[:, :, 4:-8])
loc_loss = self._l1_smooth_loss(y_true[:, :, :4], y_pred[:, :, :4])
# get positives loss
num_pos = tf.reduce_sum(y_true[:, :, -8], axis=-1)
pos_loc_loss = tf.reduce_sum(loc_loss * y_true[:, :, -8], axis=1)
pos_conf_loss = tf.reduce_sum(conf_loss * y_true[:, :, -8], axis=1)
# get negatives loss, we penalize only confidence here
num_neg = tf.minimum(self.neg_pos_ratio * num_pos, num_boxes - num_pos)
pos_num_neg_mask = tf.greater(num_neg, 0)
has_min = tf.to_float(tf.reduce_any(pos_num_neg_mask))
num_neg = tf.concat(
axis=0,
values=[num_neg, [(1 - has_min) * self.negatives_for_hard]])
num_neg_batch = tf.reduce_min(
tf.boolean_mask(num_neg, tf.greater(num_neg, 0)))
num_neg_batch = tf.to_int32(num_neg_batch)
confs_start = 4 + self.background_label_id + 1
confs_end = confs_start + self.num_classes - 1
max_confs = tf.reduce_max(y_pred[:, :, confs_start:confs_end], axis=2)
_, indices = tf.nn.top_k(max_confs * (1 - y_true[:, :, -8]),
k=num_neg_batch)
batch_idx = tf.expand_dims(tf.range(0, batch_size), 1)
batch_idx = tf.tile(batch_idx, (1, num_neg_batch))
full_indices = (tf.reshape(batch_idx, [-1]) * tf.to_int32(num_boxes) +
tf.reshape(indices, [-1]))
# full_indices = tf.concat(2, [tf.expand_dims(batch_idx, 2),
# tf.expand_dims(indices, 2)])
# neg_conf_loss = tf.gather_nd(conf_loss, full_indices)
neg_conf_loss = tf.gather(tf.reshape(conf_loss, [-1]), full_indices)
neg_conf_loss = tf.reshape(neg_conf_loss, [batch_size, num_neg_batch])
neg_conf_loss = tf.reduce_sum(neg_conf_loss, axis=1)
# loss is sum of positives and negatives
total_loss = pos_conf_loss + neg_conf_loss
total_loss /= (num_pos + tf.to_float(num_neg_batch))
num_pos = tf.where(tf.not_equal(num_pos, 0), num_pos,
tf.ones_like(num_pos))
total_loss += (self.alpha * pos_loc_loss) / num_pos
return total_loss
def filter_random_lighting(sequence_dir):
sequence_name = tf.string_split([sequence_dir], '/').values[-1]
lighting = tf.substr(sequence_name, 0, 6)
return tf.not_equal(lighting, 'random')
def model_fn(features, labels, mode, params): # pylint: disable=unused-argument
"""The `model_fn` for TPUEstimator."""
logging.info("*** Model: Params ***")
for name in sorted(params.keys()):
logging.info(" %s = %s", name, params[name])
logging.info("*** Model: Features ***")
for name in sorted(features.keys()):
logging.info(" name = %s, shape = %s", name, features[name].shape)
model = modeling.ReadItTwiceBertModel(
config=model_config, use_one_hot_embeddings=use_one_hot_embeddings)
span_prediction_layer = modeling.SpanPredictionHead(
intermediate_size=model_config.intermediate_size,
dropout_rate=model_config.hidden_dropout_prob)
# [batch_size, main_seq_length]
token_ids = features["token_ids"]
main_seq_length = tf.shape(token_ids)[1]
block_ids = features["block_ids"]
block_pos = features["block_pos"]
answer_type = features["answer_type"]
supporting_fact = features["is_supporting_fact"]
annotation_begins = features.get("entity_annotation_begins")
annotation_ends = features.get("entity_annotation_ends")
annotation_labels = features.get("entity_annotation_labels")
# Do not attend padding tokens
# [batch_size, main_seq_length, main_seq_length]
att_mask = tf.tile(
tf.expand_dims(tf.not_equal(token_ids, padding_token_id), 1),
[1, main_seq_length, 1])
att_mask = tf.cast(att_mask, dtype=tf.int32)
main_output = model(
token_ids=token_ids,
training=(mode == tf.estimator.ModeKeys.TRAIN),
block_ids=block_ids,
block_pos=block_pos,
att_mask=att_mask,
annotation_begins=annotation_begins,
annotation_ends=annotation_ends,
annotation_labels=annotation_labels,
enable_side_inputs=enable_side_inputs,
num_replicas_concat=num_replicas_concat,
cross_block_attention_mode=cross_block_attention_mode)
span_logits = span_prediction_layer(
hidden_states=main_output.final_hidden_states,
token_ids=token_ids,
padding_token_id=padding_token_id,
ignore_prefix_length=features["prefix_length"],
training=(mode == tf.estimator.ModeKeys.TRAIN))
# The "pooler" converts the encoded sequence tensor of shape
# [batch_size, seq_length, hidden_size] to a tensor of shape
# [batch_size, hidden_size]. This is necessary for segment-level
# (or segment-pair-level) classification tasks where we need a fixed
# dimensional representation of the segment.
with tf.variable_scope("pooler"):
# We "pool" the model by simply taking the hidden state corresponding
# to the first token. We assume that this has been pre-trained
first_token_tensor = tf.squeeze(
main_output.final_hidden_states[:, 0:1, :], axis=1)
pooled_output = tf.layers.dense(
first_token_tensor,
model_config.hidden_size,
activation=tf.tanh,
kernel_initializer=tf.truncated_normal_initializer(
stddev=model_config.initializer_range))
yesno_logits = yesno_model(pooled_output)
supporting_fact_logits = supporting_fact_model(pooled_output)
tvars = tf.trainable_variables()
initialized_variable_names = {}
scaffold_fn = None
if init_checkpoint:
(assignment_map, initialized_variable_names
) = checkpoint_utils.get_assignment_map_from_checkpoint(
tvars, init_checkpoint)
if use_tpu:
def tpu_scaffold():
tf.train.init_from_checkpoint(init_checkpoint, assignment_map)
return tf.train.Scaffold()
scaffold_fn = tpu_scaffold
else:
tf.train.init_from_checkpoint(init_checkpoint, assignment_map)
logging.info("**** Trainable Variables ****")
for var in tvars:
init_string = ""
if var.name in initialized_variable_names:
init_string = ", *INIT_FROM_CKPT*"
logging.info(" name = %s, shape = %s%s", var.name, var.shape,
init_string)
output_spec = None
if mode == tf.estimator.ModeKeys.TRAIN:
host_inputs = dict()
span_prediction_loss = losses.BatchSpanCrossEntropyLoss()
total_loss = 0
qa_loss = span_prediction_loss(
logits=span_logits,
annotation_begins=features["answer_annotation_begins"],
annotation_ends=features["answer_annotation_ends"],
annotation_labels=features["answer_annotation_labels"],
block_ids=block_ids,
num_replicas=num_replicas_concat,
eps=1e-5)
host_inputs["train_metrics/qa_loss"] = tf.expand_dims(qa_loss, 0)
total_loss += qa_loss
# example_mask = tf.cast(tf.not_equal(block_ids, 0), tf.float32)
# yesno_loss = compute_pooled_loss(yesno_logits, answer_type, 3,
# example_mask)
# supporting_fact_loss = compute_supporting_facts_loss(
# supporting_fact_logits, supporting_fact, example_mask)
hotpot_qa_loss = hotpot_qa_losses.BatchSpanCrossEntropyLoss()
yesno_loss, supporting_fact_loss = hotpot_qa_loss(
yesno_logits,
answer_type,
supporting_fact_logits,
supporting_fact,
block_ids,
eps=1e-5)
host_inputs["train_metrics/yesno_loss"] = tf.expand_dims(yesno_loss, 0)
total_loss += yesno_loss
host_inputs["train_metrics/supporting_fact_loss"] = tf.expand_dims(
supporting_fact_loss, 0)
total_loss += supporting_fact_loss
# Add regularization losses.
if model.losses:
total_loss += tf.math.add_n(model.losses)
train_op = optimization.create_optimizer(
total_loss,
learning_rate,
num_train_steps,
num_warmup_steps,
use_tpu,
optimizer,
poly_power,
start_warmup_step,
learning_rate_schedule,
reduce_loss_sum=True)
host_inputs.update({
"global_step":
tf.expand_dims(tf.train.get_or_create_global_step(), 0),
"train_metrics/loss":
tf.expand_dims(total_loss, 0),
})
host_call = (functools.partial(
record_summary_host_fn,
metrics_dir=os.path.join(FLAGS.output_dir,
"train_metrics")), host_inputs)
output_spec = tf.estimator.tpu.TPUEstimatorSpec(
mode=mode,
loss=total_loss,
train_op=train_op,
scaffold_fn=scaffold_fn,
host_call=host_call)
elif mode == tf.estimator.ModeKeys.PREDICT:
begin_logits_values, begin_logits_indices = tf.math.top_k(
span_logits[:, :, 0],
k=nbest_logits_for_eval,
)
end_logits_values, end_logits_indices = tf.math.top_k(
span_logits[:, :, 1],
k=nbest_logits_for_eval,
)
predictions = {
"block_ids": tf.identity(block_ids),
"begin_logits_values": begin_logits_values,
"begin_logits_indices": begin_logits_indices,
"end_logits_values": end_logits_values,
"end_logits_indices": end_logits_indices,
"token_ids": tf.identity(token_ids),
"answer_type": answer_type,
"yesno_logits": yesno_logits,
"supporting_fact_logits": supporting_fact_logits,
"is_supporting_fact": supporting_fact,
}
output_spec = tf.estimator.tpu.TPUEstimatorSpec(
mode=mode, predictions=predictions, scaffold_fn=scaffold_fn)
else:
raise ValueError("Only TRAIN and PREDICT modes is supported: %s" % mode)
return output_spec
def build_graph(self, image, edgemap):
image = image - tf.constant([104, 116, 122], dtype='float32')
image = tf.transpose(image, [0, 3, 1, 2])
edgemap = tf.expand_dims(edgemap, 3, name='edgemap4d')
def branch(name, l, up):
with tf.variable_scope(name):
l = Conv2D('convfc',
l,
1,
kernel_size=1,
activation=tf.identity,
use_bias=True,
kernel_initializer=tf.constant_initializer())
while up != 1:
l = CaffeBilinearUpSample('upsample{}'.format(up), l, 2)
up = up // 2
return l
with argscope(Conv2D, kernel_size=3, activation=tf.nn.relu), \
argscope([Conv2D, MaxPooling], data_format='NCHW'):
l = Conv2D('conv1_1', image, 64)
l = Conv2D('conv1_2', l, 64)
b1 = branch('branch1', l, 1)
l = MaxPooling('pool1', l, 2)
l = Conv2D('conv2_1', l, 128)
l = Conv2D('conv2_2', l, 128)
b2 = branch('branch2', l, 2)
l = MaxPooling('pool2', l, 2)
l = Conv2D('conv3_1', l, 256)
l = Conv2D('conv3_2', l, 256)
l = Conv2D('conv3_3', l, 256)
b3 = branch('branch3', l, 4)
l = MaxPooling('pool3', l, 2)
l = Conv2D('conv4_1', l, 512)
l = Conv2D('conv4_2', l, 512)
l = Conv2D('conv4_3', l, 512)
b4 = branch('branch4', l, 8)
l = MaxPooling('pool4', l, 2)
l = Conv2D('conv5_1', l, 512)
l = Conv2D('conv5_2', l, 512)
l = Conv2D('conv5_3', l, 512)
b5 = branch('branch5', l, 16)
final_map = Conv2D('convfcweight',
tf.concat([b1, b2, b3, b4, b5], 1),
1,
kernel_size=1,
kernel_initializer=tf.constant_initializer(0.2),
use_bias=False,
activation=tf.identity)
costs = []
for idx, b in enumerate([b1, b2, b3, b4, b5, final_map]):
b = tf.transpose(b, [0, 2, 3, 1])
output = tf.nn.sigmoid(b, name='output{}'.format(idx + 1))
xentropy = class_balanced_sigmoid_cross_entropy(
b, edgemap, name='xentropy{}'.format(idx + 1))
costs.append(xentropy)
# some magic threshold
pred = tf.cast(tf.greater(output, 0.5), tf.int32, name='prediction')
wrong = tf.cast(tf.not_equal(pred, edgemap), tf.float32)
wrong = tf.reduce_mean(wrong, name='train_error')
wd_w = tf.train.exponential_decay(2e-4, get_global_step_var(), 80000,
0.7, True)
wd_cost = tf.multiply(wd_w,
regularize_cost('.*/W', tf.nn.l2_loss),
name='wd_cost')
costs.append(wd_cost)
add_param_summary(('.*/W', ['histogram'])) # monitor W
total_cost = tf.add_n(costs, name='cost')
add_moving_summary(wrong, total_cost, *costs)
return total_cost
def parse_train_data(self, data):
"""Parse data for ShapeMask training."""
classes = data['groundtruth_classes']
boxes = data['groundtruth_boxes']
masks = data['groundtruth_instance_masks']
is_crowds = data['groundtruth_is_crowd']
# Skips annotations with `is_crowd` = True.
if self._skip_crowd_during_training and self._is_training:
num_groundtrtuhs = tf.shape(classes)[0]
with tf.control_dependencies([num_groundtrtuhs, is_crowds]):
indices = tf.cond(
tf.greater(tf.size(is_crowds), 0),
lambda: tf.where(tf.logical_not(is_crowds))[:, 0],
lambda: tf.cast(tf.range(num_groundtrtuhs), tf.int64))
classes = tf.gather(classes, indices)
boxes = tf.gather(boxes, indices)
masks = tf.gather(masks, indices)
# If not using category, makes all categories with id = 0.
if not self._use_category:
classes = tf.cast(tf.greater(classes, 0), dtype=tf.float32)
image = self.get_normalized_image(data)
# Flips image randomly during training.
if self._aug_rand_hflip:
image, boxes, masks = input_utils.random_horizontal_flip(
image, boxes, masks)
# Converts boxes from normalized coordinates to pixel coordinates.
image_shape = tf.shape(image)[0:2]
boxes = box_utils.denormalize_boxes(boxes, image_shape)
# Resizes and crops image.
image, image_info = input_utils.resize_and_crop_image(
image,
self._output_size,
self._output_size,
aug_scale_min=self._aug_scale_min,
aug_scale_max=self._aug_scale_max)
self._train_image_scale = image_info[2, :]
self._train_offset = image_info[3, :]
# Resizes and crops boxes and masks.
boxes = input_utils.resize_and_crop_boxes(boxes,
self._train_image_scale,
image_info[1, :],
self._train_offset)
# Filters out ground truth boxes that are all zeros.
indices = box_utils.get_non_empty_box_indices(boxes)
boxes = tf.gather(boxes, indices)
classes = tf.gather(classes, indices)
masks = tf.gather(masks, indices)
# Assigns anchors.
input_anchor = anchor.Anchor(self._min_level, self._max_level,
self._num_scales, self._aspect_ratios,
self._anchor_size, self._output_size)
anchor_labeler = anchor.AnchorLabeler(input_anchor,
self._match_threshold,
self._unmatched_threshold)
(cls_targets, box_targets,
num_positives) = anchor_labeler.label_anchors(
boxes, tf.cast(tf.expand_dims(classes, axis=1), tf.float32))
# Sample groundtruth masks/boxes/classes for mask branch.
num_masks = tf.shape(masks)[0]
mask_shape = tf.shape(masks)[1:3]
# Pad sampled boxes/masks/classes to a constant batch size.
padded_boxes = input_utils.pad_to_fixed_size(boxes,
self._num_sampled_masks)
padded_classes = input_utils.pad_to_fixed_size(classes,
self._num_sampled_masks)
padded_masks = input_utils.pad_to_fixed_size(masks,
self._num_sampled_masks)
# Randomly sample groundtruth masks for mask branch training. For the image
# without groundtruth masks, it will sample the dummy padded tensors.
rand_indices = tf.random.shuffle(
tf.range(tf.maximum(num_masks, self._num_sampled_masks)))
rand_indices = tf.mod(rand_indices, tf.maximum(num_masks, 1))
rand_indices = rand_indices[0:self._num_sampled_masks]
rand_indices = tf.reshape(rand_indices, [self._num_sampled_masks])
sampled_boxes = tf.gather(padded_boxes, rand_indices)
sampled_classes = tf.gather(padded_classes, rand_indices)
sampled_masks = tf.gather(padded_masks, rand_indices)
# Jitter the sampled boxes to mimic the noisy detections.
sampled_boxes = box_utils.jitter_boxes(
sampled_boxes, noise_scale=self._box_jitter_scale)
sampled_boxes = box_utils.clip_boxes(sampled_boxes, self._output_size)
# Compute mask targets in feature crop. A feature crop fully contains a
# sampled box.
mask_outer_boxes = box_utils.compute_outer_boxes(
sampled_boxes, tf.shape(image)[0:2], scale=self._outer_box_scale)
mask_outer_boxes = box_utils.clip_boxes(mask_outer_boxes,
self._output_size)
# Compensate the offset of mask_outer_boxes to map it back to original image
# scale.
mask_outer_boxes_ori = mask_outer_boxes
mask_outer_boxes_ori += tf.tile(
tf.expand_dims(self._train_offset, axis=0), [1, 2])
mask_outer_boxes_ori /= tf.tile(
tf.expand_dims(self._train_image_scale, axis=0), [1, 2])
norm_mask_outer_boxes_ori = box_utils.normalize_boxes(
mask_outer_boxes_ori, mask_shape)
# Set sampled_masks shape to [batch_size, height, width, 1].
sampled_masks = tf.cast(tf.expand_dims(sampled_masks, axis=-1),
tf.float32)
mask_targets = tf.image.crop_and_resize(
sampled_masks,
norm_mask_outer_boxes_ori,
box_ind=tf.range(self._num_sampled_masks),
crop_size=[self._mask_crop_size, self._mask_crop_size],
method='bilinear',
extrapolation_value=0,
name='train_mask_targets')
mask_targets = tf.where(tf.greater_equal(mask_targets, 0.5),
tf.ones_like(mask_targets),
tf.zeros_like(mask_targets))
mask_targets = tf.squeeze(mask_targets, axis=-1)
if self._up_sample_factor > 1:
fine_mask_targets = tf.image.crop_and_resize(
sampled_masks,
norm_mask_outer_boxes_ori,
box_ind=tf.range(self._num_sampled_masks),
crop_size=[
self._mask_crop_size * self._up_sample_factor,
self._mask_crop_size * self._up_sample_factor
],
method='bilinear',
extrapolation_value=0,
name='train_mask_targets')
fine_mask_targets = tf.where(
tf.greater_equal(fine_mask_targets, 0.5),
tf.ones_like(fine_mask_targets),
tf.zeros_like(fine_mask_targets))
fine_mask_targets = tf.squeeze(fine_mask_targets, axis=-1)
else:
fine_mask_targets = mask_targets
# If bfloat16 is used, casts input image to tf.bfloat16.
if self._use_bfloat16:
image = tf.cast(image, dtype=tf.bfloat16)
valid_image = tf.cast(tf.not_equal(num_masks, 0), tf.int32)
if self._mask_train_class == 'all':
mask_is_valid = valid_image * tf.ones_like(sampled_classes,
tf.int32)
else:
# Get the intersection of sampled classes with training splits.
mask_valid_classes = tf.cast(
tf.expand_dims(
class_utils.coco_split_class_ids(self._mask_train_class),
1), sampled_classes.dtype)
match = tf.reduce_any(
tf.equal(tf.expand_dims(sampled_classes, 0),
mask_valid_classes), 0)
mask_is_valid = valid_image * tf.cast(match, tf.int32)
# Packs labels for model_fn outputs.
labels = {
'cls_targets': cls_targets,
'box_targets': box_targets,
'anchor_boxes': input_anchor.multilevel_boxes,
'num_positives': num_positives,
'image_info': image_info,
# For ShapeMask.
'mask_boxes': sampled_boxes,
'mask_outer_boxes': mask_outer_boxes,
'mask_targets': mask_targets,
'fine_mask_targets': fine_mask_targets,
'mask_classes': sampled_classes,
'mask_is_valid': mask_is_valid,
}
return image, labels
def call(self,
item_states,
item_ids,
global_item_states,
global_item_ids,
labels_mask=None,
labels_weight=None):
"""Calls the layer.
Args:
item_states: <float32>[batch_size, hidden_size]
item_ids: <int32>[batch_size, hidden_size]
global_item_states: <float32>[global_batch_size, hidden_size]
global_item_ids: <int32>[global_batch_size, hidden_size]
labels_mask: <int32>[batch_size, global_batch_size]
labels_weight: <float32>[batch_size, global_batch_size]
Returns:
total_loss: <float>
"""
# [batch_size, 1]
item_ids_expanded = tf.expand_dims(item_ids, 1)
# [1, global_batch_size]
global_item_ids_expanded = tf.expand_dims(global_item_ids, 0)
# Positive labels when IDs are the same
# [batch_size, global_batch_size]
labels = tf.equal(item_ids_expanded, global_item_ids_expanded)
if labels_mask is not None:
labels = tf.logical_and(labels, labels_mask)
# In two cases the loss is ignored (label_weight is 0):
# (1) Either of IDs is the padding ID
# (2) Loss is computed when comparisng a sample to itself
both_ids_are_not_padding = tf.logical_and(
tf.not_equal(item_ids_expanded, self.padding_id),
tf.not_equal(global_item_ids_expanded, self.padding_id))
if labels_weight is None:
labels_weight = tf.cast(both_ids_are_not_padding, tf.float32)
else:
labels_weight = labels_weight * tf.cast(both_ids_are_not_padding,
tf.float32)
# Hacky way to tell if samples are exactly the same --
# their IDs are the same and their states are approximately the same.
samples_are_the_same = tf.logical_and(
tf.less(
tf.norm(tf.expand_dims(item_states, 1) -
tf.expand_dims(global_item_states, 0),
axis=2), 1e-5), labels)
# [batch_size, global_batch_size]
labels_weight = (labels_weight *
(1 - tf.cast(samples_are_the_same, tf.float32)))
# [batch_size, global_batch_size]
labels = tf.stop_gradient(tf.cast(labels, tf.float32))
labels_weight = tf.stop_gradient(tf.cast(labels_weight, tf.float32))
if self.apply_linear_layer:
item_states = self.linear_fn(item_states)
# [batch_size, global_batch_size]
logits = tf.matmul(item_states, global_item_states, transpose_b=True)
logits += self.bias_term
# [batch_size, global_batch_size]
loss_per_sample = tf.nn.sigmoid_cross_entropy_with_logits(
labels=labels, logits=logits)
loss_per_sample *= labels_weight
# Here we compute mean because otherwise the loss becomes too large
loss_per_sample = tf.reduce_sum(loss_per_sample, 1)
loss_per_sample /= (tf.reduce_sum(labels_weight, 1) + 1e-5)
return tf.reduce_sum(loss_per_sample)
def compute_mel_filterbank_features(waveforms,
sample_rate=16000,
dither=1.0 / np.iinfo(np.int16).max,
preemphasis=0.97,
frame_length=25,
frame_step=10,
fft_length=None,
window_fn=functools.partial(
tf.signal.hann_window, periodic=True),
lower_edge_hertz=80.0,
upper_edge_hertz=7600.0,
num_mel_bins=80,
log_noise_floor=1e-3,
apply_mask=True):
"""Implement mel-filterbank extraction using tf ops.
Args:
waveforms: float32 tensor with shape [batch_size, max_len]
sample_rate: sampling rate of the waveform
dither: stddev of Gaussian noise added to waveform to prevent quantization
artefacts
preemphasis: waveform high-pass filtering constant
frame_length: frame length in ms
frame_step: frame_Step in ms
fft_length: number of fft bins
window_fn: windowing function
lower_edge_hertz: lowest frequency of the filterbank
upper_edge_hertz: highest frequency of the filterbank
num_mel_bins: filterbank size
log_noise_floor: clip small values to prevent numeric overflow in log
apply_mask: When working on a batch of samples, set padding frames to zero
Returns:
filterbanks: a float32 tensor with shape [batch_size, len, num_bins, 1]
"""
# `stfts` is a complex64 Tensor representing the short-time Fourier
# Transform of each signal in `signals`. Its shape is
# [batch_size, ?, fft_unique_bins]
# where fft_unique_bins = fft_length // 2 + 1
# Find the wave length: the largest index for which the value is !=0
# note that waveforms samples that are exactly 0.0 are quite common, so
# simply doing sum(waveforms != 0, axis=-1) will not work correctly.
wav_lens = tf.reduce_max(
tf.expand_dims(tf.range(tf.shape(waveforms)[1]), 0) *
tf.to_int32(tf.not_equal(waveforms, 0.0)),
axis=-1) + 1
if dither > 0:
waveforms += tf.random_normal(tf.shape(waveforms), stddev=dither)
if preemphasis > 0:
waveforms = waveforms[:, 1:] - preemphasis * waveforms[:, :-1]
wav_lens -= 1
frame_length = int(frame_length * sample_rate / 1e3)
frame_step = int(frame_step * sample_rate / 1e3)
if fft_length is None:
fft_length = int(2**(np.ceil(np.log2(frame_length))))
stfts = tf.contrib.signal.stft(waveforms,
frame_length=frame_length,
frame_step=frame_step,
fft_length=fft_length,
window_fn=window_fn,
pad_end=True)
stft_lens = (wav_lens + (frame_step - 1)) // frame_step
masks = tf.to_float(
tf.less_equal(tf.expand_dims(tf.range(tf.shape(stfts)[1]), 0),
tf.expand_dims(stft_lens, 1)))
# An energy spectrogram is the magnitude of the complex-valued STFT.
# A float32 Tensor of shape [batch_size, ?, 257].
magnitude_spectrograms = tf.abs(stfts)
# Warp the linear-scale, magnitude spectrograms into the mel-scale.
num_spectrogram_bins = magnitude_spectrograms.shape[-1].value
linear_to_mel_weight_matrix = (
tf.contrib.signal.linear_to_mel_weight_matrix(num_mel_bins,
num_spectrogram_bins,
sample_rate,
lower_edge_hertz,
upper_edge_hertz))
mel_spectrograms = tf.tensordot(magnitude_spectrograms,
linear_to_mel_weight_matrix, 1)
# Note: Shape inference for tensordot does not currently handle this case.
mel_spectrograms.set_shape(magnitude_spectrograms.shape[:-1].concatenate(
linear_to_mel_weight_matrix.shape[-1:]))
log_mel_sgram = tf.log(tf.maximum(log_noise_floor, mel_spectrograms))
if apply_mask:
log_mel_sgram *= tf.expand_dims(tf.to_float(masks), -1)
return tf.expand_dims(log_mel_sgram, -1, name="mel_sgrams")
def prepare_encoder_input(features,
hparams,
embed_scope=None,
embed_token_fn=common_embed.embed_tokens):
"""Prepares the input for the screen encoder.
Args:
features: the feature dict.
hparams: the hyperparameter.
embed_scope: the embedding variable scope.
embed_token_fn: the function for embedding tokens.
Returns:
object_embedding: a Tensor of shape
[batch_size, num_steps, max_object_count, embed_depth]
object_mask: a binary tensor of shape
[batch_size, num_steps, max_object_count]
nonpadding_bias: a Tensor of shape
[batch_size, num_steps, max_object_count]
"""
with tf.control_dependencies(
[tf.assert_equal(tf.rank(features["obj_text"]), 4)]):
if hparams.get("synthetic_screen_noise", 0.) > 0.:
num_objects = tf.shape(features["obj_text"])[2]
# [batch, length, num_objects]
target_obj_mask = tf.cast(
tf.one_hot(features["objects"], depth=num_objects), tf.bool)
num_tokens = tf.shape(features["obj_text"])[-1]
target_obj_mask = tf.tile(tf.expand_dims(target_obj_mask, 3),
[1, 1, 1, num_tokens])
# Randomly keep tokens
keep_mask = tf.greater_equal(
tf.random_uniform(shape=tf.shape(features["obj_text"])),
hparams.synthetic_screen_noise)
# Keep paddings
keep_mask = tf.logical_or(tf.equal(features["obj_text"], 0),
keep_mask)
# Keep targets
target_obj_mask = tf.logical_or(target_obj_mask, keep_mask)
features["obj_text"] = tf.where(
target_obj_mask, features["obj_text"],
tf.random_uniform(shape=tf.shape(features["obj_text"]),
maxval=50000,
dtype=tf.int32))
text_embeddings, _ = embed_token_fn(features["obj_text"],
hparams.task_vocab_size,
hparams.hidden_size,
hparams,
embed_scope=embed_scope)
with tf.variable_scope("obj_text_embed", reuse=tf.AUTO_REUSE):
if hparams.obj_text_aggregation == "max":
embed_bias = tf.cast(tf.less(features["obj_text"], 2),
tf.float32) * -1e7
with tf.control_dependencies(
[tf.assert_equal(tf.rank(embed_bias), 4)]):
text_embeddings = tf.reduce_max(
text_embeddings + tf.expand_dims(embed_bias, 4), -2)
no_txt_embed = tf.get_variable(name="no_txt_embed",
shape=[hparams.hidden_size])
shape = common_layers.shape_list(text_embeddings)
no_txt_embed = tf.tile(
tf.reshape(no_txt_embed,
[1, 1, 1, hparams.hidden_size]),
[shape[0], shape[1], shape[2], 1])
text_embeddings = tf.maximum(text_embeddings, no_txt_embed)
elif hparams.obj_text_aggregation == "sum":
# [batch, step, #max_obj, #max_token] 0 for padded tokens
real_objects = tf.cast(
tf.greater_equal(features["obj_text"], 2), tf.float32)
# [batch, step, #max_obj, hidden] 0s for padded objects
text_embeddings = tf.reduce_sum(
text_embeddings * tf.expand_dims(real_objects, 4), -2)
elif hparams.obj_text_aggregation == "mean":
shape_list = common_layers.shape_list(text_embeddings)
embeddings = tf.reshape(text_embeddings, [-1] + shape_list[3:])
emb_sum = tf.reduce_sum(tf.abs(embeddings), axis=-1)
non_paddings = tf.not_equal(emb_sum, 0.0)
embeddings = common_embed.average_bag_of_embeds(
embeddings,
non_paddings,
use_bigrams=True,
bigram_embed_scope=embed_scope,
append_start_end=True)
text_embeddings = tf.reshape(
embeddings, shape_list[:3] + [hparams.hidden_size])
else:
raise ValueError("Unrecognized token aggregation %s" %
(hparams.obj_text_aggregation))
with tf.control_dependencies([
tf.assert_equal(tf.rank(features["obj_type"]), 3),
tf.assert_equal(tf.rank(features["obj_clickable"]), 3)
]):
with tf.variable_scope("encode_object_attr", reuse=tf.AUTO_REUSE):
type_embedding = tf.nn.embedding_lookup(params=tf.get_variable(
name="embed_type_w",
shape=[hparams.get("num_types", 100), hparams.hidden_size]),
ids=tf.maximum(
features["obj_type"],
0))
clickable_embedding = tf.nn.embedding_lookup(
params=tf.get_variable(name="embed_clickable_w",
shape=[2, hparams.hidden_size]),
ids=features["obj_clickable"])
with tf.control_dependencies(
[tf.assert_equal(tf.rank(features["obj_screen_pos"]), 4)]):
def _create_embed(feature_name, vocab_size, depth):
"""Embed a position feature."""
pos_embedding_list = []
with tf.variable_scope("encode_object_" + feature_name,
reuse=tf.AUTO_REUSE):
num_featues = common_layers.shape_list(
features[feature_name])[-1]
for i in range(num_featues):
pos_embedding_list.append(
tf.nn.embedding_lookup(
params=tf.get_variable(name=feature_name +
"_embed_w_%d" % i,
shape=[vocab_size, depth]),
ids=features[feature_name][:, :, :, i]))
pos_embedding = tf.add_n(pos_embedding_list)
return pos_embedding
pos_embedding = _create_embed("obj_screen_pos", hparams.max_pixel_pos,
hparams.hidden_size)
if "all" == hparams.screen_embedding_feature or (
"dom" in hparams.screen_embedding_feature):
dom_embedding = _create_embed("obj_dom_pos", hparams.max_dom_pos,
hparams.hidden_size)
object_embed = tf.zeros_like(text_embeddings, dtype=tf.float32)
if hparams.screen_embedding_feature == "all":
object_embed = (text_embeddings + type_embedding + pos_embedding +
dom_embedding)
elif "text" in hparams.screen_embedding_feature:
object_embed += text_embeddings
elif "type" in hparams.screen_embedding_feature:
object_embed += type_embedding
elif "pos" in hparams.screen_embedding_feature:
object_embed += pos_embedding
elif "dom" in hparams.screen_embedding_feature:
object_embed += dom_embedding
elif "click" in hparams.screen_embedding_feature:
object_embed += clickable_embedding
object_mask = tf.cast(tf.not_equal(features["obj_type"], -1), tf.float32)
object_embed = object_embed * tf.expand_dims(object_mask, 3)
att_bias = (1. - object_mask) * common_attention.large_compatible_negative(
object_embed.dtype)
return object_embed, object_mask, att_bias
def main(unused_argv):
FLAGS.comb_dropout_keep_prob = 1.0
FLAGS.image_keep_prob = 1.0
FLAGS.elements_keep_prob = 1.0
# Get dataset-dependent information.
tf.gfile.MakeDirs(FLAGS.eval_logdir)
tf.logging.info('Evaluating on %s set', FLAGS.split)
with tf.Graph().as_default():
samples = model_input.get_input_fn(FLAGS)()
# Get model segmentation predictions.
num_classes = model_input.dataset_descriptors[
FLAGS.dataset].num_classes
output_to_num_classes = model.get_output_to_num_classes(FLAGS)
if tuple(FLAGS.eval_scales) == (1.0, ):
tf.logging.info('Performing single-scale test.')
predictions, probs = model.predict_labels(
samples['image'],
samples,
FLAGS,
outputs_to_num_classes=output_to_num_classes,
image_pyramid=FLAGS.image_pyramid,
merge_method=FLAGS.merge_method,
atrous_rates=FLAGS.atrous_rates,
add_image_level_feature=FLAGS.add_image_level_feature,
aspp_with_batch_norm=FLAGS.aspp_with_batch_norm,
aspp_with_separable_conv=FLAGS.aspp_with_separable_conv,
multi_grid=FLAGS.multi_grid,
depth_multiplier=FLAGS.depth_multiplier,
output_stride=FLAGS.output_stride,
decoder_output_stride=FLAGS.decoder_output_stride,
decoder_use_separable_conv=FLAGS.decoder_use_separable_conv,
crop_size=[FLAGS.image_size, FLAGS.image_size],
logits_kernel_size=FLAGS.logits_kernel_size,
model_variant=FLAGS.model_variant)
else:
tf.logging.info('Performing multi-scale test.')
predictions, probs = model.predict_labels_multi_scale(
samples['image'],
samples,
FLAGS,
outputs_to_num_classes=output_to_num_classes,
eval_scales=FLAGS.eval_scales,
add_flipped_images=FLAGS.add_flipped_images,
merge_method=FLAGS.merge_method,
atrous_rates=FLAGS.atrous_rates,
add_image_level_feature=FLAGS.add_image_level_feature,
aspp_with_batch_norm=FLAGS.aspp_with_batch_norm,
aspp_with_separable_conv=FLAGS.aspp_with_separable_conv,
multi_grid=FLAGS.multi_grid,
depth_multiplier=FLAGS.depth_multiplier,
output_stride=FLAGS.output_stride,
decoder_output_stride=FLAGS.decoder_output_stride,
decoder_use_separable_conv=FLAGS.decoder_use_separable_conv,
crop_size=[FLAGS.image_size, FLAGS.image_size],
logits_kernel_size=FLAGS.logits_kernel_size,
model_variant=FLAGS.model_variant)
metric_map = {}
for output in output_to_num_classes:
output_predictions = predictions[output]
output_probs = probs[output]
if output == 'segment':
output_predictions = tf.expand_dims(output_predictions, 3)
if num_classes == 2:
labels = samples['label']
iou, weights = model.foreground_iou(
labels, output_predictions, FLAGS)
soft_iou, _ = model.foreground_iou(
labels, output_probs[:, :, :, 1:2], FLAGS)
metric_map['mIOU'] = tf.metrics.mean(iou)
metric_map['soft_mIOU'] = tf.metrics.mean(soft_iou)
high_prob_overlaps = calc_high_prob_overlaps(
labels, output_probs, weights)
metric_map['highestOverlaps'] = tf.metrics.mean(
high_prob_overlaps)
output_probs *= weights
else:
output_predictions = tf.reshape(output_predictions,
shape=[-1])
labels = tf.reshape(samples['label'], shape=[-1])
weights = tf.to_float(
tf.not_equal(
labels, model_input.dataset_descriptors[
FLAGS.dataset].ignore_label))
# Set ignore_label regions to label 0, because metrics.mean_iou
# requires range of labels=[0, dataset.num_classes).
# Note the ignore_label regions are not evaluated since
# the corresponding regions contain weights=0.
labels = tf.where(
tf.equal(
labels, model_input.dataset_descriptors[
FLAGS.dataset].ignore_label),
tf.zeros_like(labels), labels)
predictions_tag = 'mIOU'
for eval_scale in FLAGS.eval_scales:
predictions_tag += '_' + str(eval_scale)
if FLAGS.add_flipped_images:
predictions_tag += '_flipped'
# Define the evaluation metric.
metric_map[
predictions_tag] = contrib_slim.metrics.mean_iou(
output_predictions,
labels,
num_classes,
weights=weights)
def label_summary(labels, weights, name):
tf.summary.image(
name,
tf.reshape(
tf.cast(
tf.to_float(labels * 255) /
tf.to_float(num_classes), tf.uint8) *
tf.cast(weights, tf.uint8),
[-1, FLAGS.image_size, FLAGS.image_size, 1]), 8)
label_summary(labels, weights, 'label')
label_summary(output_predictions, weights,
'output_predictions')
tf.summary.image('logits',
tf.expand_dims(output_probs[:, :, :, 1], 3))
elif output == 'regression':
labels = samples['label']
ignore_mask = model.get_ignore_mask(labels, FLAGS)
accurate = calc_accuracy_in_box(labels, output_probs,
ignore_mask)
metric_map['inBoxAccuracy'] = tf.metrics.mean(accurate)
tf.summary.image('image', samples['image'], 8)
metrics_to_values, metrics_to_updates = contrib_slim.metrics.aggregate_metric_map(
metric_map)
for metric_name, metric_value in metrics_to_values.iteritems():
metric_value = tf.Print(metric_value, [metric_value], metric_name)
tf.summary.scalar(metric_name, metric_value)
num_batches = int(
math.ceil(FLAGS.num_samples / float(FLAGS.batch_size)))
tf.logging.info('Eval num images %d', FLAGS.num_samples)
tf.logging.info('Eval batch size %d and num batch %d',
FLAGS.batch_size, num_batches)
contrib_slim.evaluation.evaluation_loop(
master='',
checkpoint_dir=FLAGS.checkpoint_dir,
logdir=FLAGS.eval_logdir,
num_evals=num_batches,
eval_op=metrics_to_updates.values(),
summary_op=tf.summary.merge_all(),
max_number_of_evaluations=None,
eval_interval_secs=FLAGS.eval_interval_secs)
def detection_loss(cls_outputs, box_outputs, labels, params):
"""Computes total detection loss.
Computes total detection loss including box and class loss from all levels.
Args:
cls_outputs: an OrderDict with keys representing levels and values
representing logits in [batch_size, height, width, num_anchors].
box_outputs: an OrderDict with keys representing levels and values
representing box regression targets in [batch_size, height, width,
num_anchors * 4].
labels: the dictionary that returned from dataloader that includes
groundtruth targets.
params: the dictionary including training parameters specified in
default_haprams function in this file.
Returns:
total_loss: an integer tensor representing total loss reducing from
class and box losses from all levels.
cls_loss: an integer tensor representing total class loss.
box_loss: an integer tensor representing total box regression loss.
"""
# Sum all positives in a batch for normalization and avoid zero
# num_positives_sum, which would lead to inf loss during training
num_positives_sum = tf.reduce_sum(labels['mean_num_positives']) + 1.0
positives_momentum = params.get('positives_momentum', None) or 0
if positives_momentum > 0:
# normalize the num_positive_examples for training stability.
moving_normalizer_var = tf.Variable(
0.0,
name='moving_normalizer',
dtype=tf.float32,
synchronization=tf.VariableSynchronization.ON_READ,
trainable=False,
aggregation=tf.VariableAggregation.MEAN)
num_positives_sum = tf.keras.backend.moving_average_update(
moving_normalizer_var,
num_positives_sum,
momentum=params['positives_momentum'])
elif positives_momentum < 0:
num_positives_sum = utils.cross_replica_mean(num_positives_sum)
levels = cls_outputs.keys()
cls_losses = []
box_losses = []
for level in levels:
# Onehot encoding for classification labels.
cls_targets_at_level = tf.one_hot(labels['cls_targets_%d' % level],
params['num_classes'],
dtype=cls_outputs[level].dtype)
if params['data_format'] == 'channels_first':
bs, _, width, height, _ = cls_targets_at_level.get_shape().as_list(
)
cls_targets_at_level = tf.reshape(cls_targets_at_level,
[bs, -1, width, height])
else:
bs, width, height, _, _ = cls_targets_at_level.get_shape().as_list(
)
cls_targets_at_level = tf.reshape(cls_targets_at_level,
[bs, width, height, -1])
box_targets_at_level = labels['box_targets_%d' % level]
cls_loss = focal_loss(cls_outputs[level],
cls_targets_at_level,
params['alpha'],
params['gamma'],
normalizer=num_positives_sum,
label_smoothing=params['label_smoothing'])
if params['data_format'] == 'channels_first':
cls_loss = tf.reshape(
cls_loss, [bs, -1, width, height, params['num_classes']])
else:
cls_loss = tf.reshape(
cls_loss, [bs, width, height, -1, params['num_classes']])
cls_loss *= tf.cast(
tf.expand_dims(tf.not_equal(labels['cls_targets_%d' % level], -2),
-1), cls_loss.dtype)
cls_loss_sum = tf.reduce_sum(cls_loss)
cls_losses.append(tf.cast(cls_loss_sum, tf.float32))
if params['box_loss_weight']:
box_losses.append(
_box_loss(box_outputs[level],
box_targets_at_level,
num_positives_sum,
delta=params['delta']))
# Sum per level losses to total loss.
cls_loss = tf.add_n(cls_losses)
box_loss = tf.add_n(box_losses) if box_losses else tf.constant(0.)
total_loss = (cls_loss + params['box_loss_weight'] * box_loss)
return total_loss, cls_loss, box_loss
def build_genie_model(feat_dict,
cfg,
batch_size,
seq_len,
is_training=True,
seq_varlens=None,
dtype=tf.float32):
"""Builds a Piano Genie model.
Args:
feat_dict: Dictionary containing input tensors.
cfg: Configuration object.
batch_size: Number of items in batch.
seq_len: Length of each batch item.
is_training: Set to False for evaluation.
seq_varlens: If not None, a tensor with the batch sequence lengths.
dtype: Model weight type.
Returns:
A dict containing tensors for relevant model config.
"""
out_dict = {}
# Parse features
pitches = util.demidify(feat_dict["midi_pitches"])
velocities = feat_dict["velocities"]
pitches_scalar = ((tf.cast(pitches, tf.float32) / 87.) * 2.) - 1.
# Create sequence lens
if is_training and cfg.train_randomize_seq_len:
seq_lens = tf.random_uniform(
[batch_size],
minval=cfg.train_seq_len_min,
maxval=seq_len + 1,
dtype=tf.int32)
stp_varlen_mask = tf.sequence_mask(
seq_lens, maxlen=seq_len, dtype=tf.float32)
elif seq_varlens is not None:
seq_lens = seq_varlens
stp_varlen_mask = tf.sequence_mask(
seq_varlens, maxlen=seq_len, dtype=tf.float32)
else:
seq_lens = tf.ones([batch_size], dtype=tf.int32) * seq_len
stp_varlen_mask = None
# Encode
if (cfg.stp_emb_unconstrained or cfg.stp_emb_vq or cfg.stp_emb_iq or
cfg.seq_emb_unconstrained or cfg.seq_emb_vae or
cfg.lor_emb_unconstrained):
# Build encoder features
enc_feats = []
if cfg.enc_pitch_scalar:
enc_feats.append(tf.expand_dims(pitches_scalar, axis=-1))
else:
enc_feats.append(tf.one_hot(pitches, 88))
if "delta_times_int" in cfg.enc_aux_feats:
enc_feats.append(
tf.one_hot(feat_dict["delta_times_int"],
cfg.data_max_discrete_times + 1))
if "velocities" in cfg.enc_aux_feats:
enc_feats.append(
tf.one_hot(velocities, cfg.data_max_discrete_velocities + 1))
enc_feats = tf.concat(enc_feats, axis=2)
with tf.variable_scope("encoder"):
enc_stp, enc_seq = simple_lstm_encoder(
enc_feats,
seq_lens,
rnn_celltype=cfg.rnn_celltype,
rnn_nlayers=cfg.rnn_nlayers,
rnn_nunits=cfg.rnn_nunits,
rnn_bidirectional=cfg.enc_rnn_bidirectional,
dtype=dtype)
latents = []
# Step embeddings (single vector per timestep)
if cfg.stp_emb_unconstrained:
with tf.variable_scope("stp_emb_unconstrained"):
stp_emb_unconstrained = tf.layers.dense(
enc_stp, cfg.stp_emb_unconstrained_embedding_dim)
out_dict["stp_emb_unconstrained"] = stp_emb_unconstrained
latents.append(stp_emb_unconstrained)
# Quantized step embeddings with VQ-VAE
if cfg.stp_emb_vq:
import sonnet as snt # pylint:disable=g-import-not-at-top,import-outside-toplevel
with tf.variable_scope("stp_emb_vq"):
with tf.variable_scope("pre_vq"):
# pre_vq_encoding is tf.float32 of [batch_size, seq_len, embedding_dim]
pre_vq_encoding = tf.layers.dense(enc_stp, cfg.stp_emb_vq_embedding_dim)
with tf.variable_scope("quantizer"):
assert stp_varlen_mask is None
vq_vae = snt.nets.VectorQuantizer(
embedding_dim=cfg.stp_emb_vq_embedding_dim,
num_embeddings=cfg.stp_emb_vq_codebook_size,
commitment_cost=cfg.stp_emb_vq_commitment_cost)
vq_vae_output = vq_vae(pre_vq_encoding, is_training=is_training)
stp_emb_vq_quantized = vq_vae_output["quantize"]
stp_emb_vq_discrete = tf.reshape(
tf.argmax(vq_vae_output["encodings"], axis=1, output_type=tf.int32),
[batch_size, seq_len])
stp_emb_vq_codebook = tf.transpose(vq_vae.embeddings)
out_dict["stp_emb_vq_quantized"] = stp_emb_vq_quantized
out_dict["stp_emb_vq_discrete"] = stp_emb_vq_discrete
out_dict["stp_emb_vq_loss"] = vq_vae_output["loss"]
out_dict["stp_emb_vq_codebook"] = stp_emb_vq_codebook
out_dict["stp_emb_vq_codebook_ppl"] = vq_vae_output["perplexity"]
latents.append(stp_emb_vq_quantized)
# This tensor retrieves continuous embeddings from codebook. It should
# *never* be used during training.
out_dict["stp_emb_vq_quantized_lookup"] = tf.nn.embedding_lookup(
stp_emb_vq_codebook, stp_emb_vq_discrete)
# Integer-quantized step embeddings with straight-through
if cfg.stp_emb_iq:
with tf.variable_scope("stp_emb_iq"):
with tf.variable_scope("pre_iq"):
# pre_iq_encoding is tf.float32 of [batch_size, seq_len]
pre_iq_encoding = tf.layers.dense(enc_stp, 1)[:, :, 0]
def iqst(x, n):
"""Integer quantization with straight-through estimator."""
eps = 1e-7
s = float(n - 1)
xp = tf.clip_by_value((x + 1) / 2.0, -eps, 1 + eps)
xpp = tf.round(s * xp)
xppp = 2 * (xpp / s) - 1
return xpp, x + tf.stop_gradient(xppp - x)
with tf.variable_scope("quantizer"):
# Pass rounded vals to decoder w/ straight-through estimator
stp_emb_iq_discrete_f, stp_emb_iq_discrete_rescaled = iqst(
pre_iq_encoding, cfg.stp_emb_iq_nbins)
stp_emb_iq_discrete = tf.cast(stp_emb_iq_discrete_f + 1e-4, tf.int32)
stp_emb_iq_discrete_f = tf.cast(stp_emb_iq_discrete, tf.float32)
stp_emb_iq_quantized = tf.expand_dims(
stp_emb_iq_discrete_rescaled, axis=2)
# Determine which elements round to valid indices
stp_emb_iq_inrange = tf.logical_and(
tf.greater_equal(pre_iq_encoding, -1),
tf.less_equal(pre_iq_encoding, 1))
stp_emb_iq_inrange_mask = tf.cast(stp_emb_iq_inrange, tf.float32)
stp_emb_iq_valid_p = weighted_avg(stp_emb_iq_inrange_mask,
stp_varlen_mask)
# Regularize to encourage encoder to output in range
stp_emb_iq_range_penalty = weighted_avg(
tf.square(tf.maximum(tf.abs(pre_iq_encoding) - 1, 0)),
stp_varlen_mask)
# Regularize to correlate latent finite differences to input
stp_emb_iq_dlatents = pre_iq_encoding[:, 1:] - pre_iq_encoding[:, :-1]
if cfg.stp_emb_iq_contour_dy_scalar:
stp_emb_iq_dnotes = pitches_scalar[:, 1:] - pitches_scalar[:, :-1]
else:
stp_emb_iq_dnotes = tf.cast(pitches[:, 1:] - pitches[:, :-1],
tf.float32)
if cfg.stp_emb_iq_contour_exp == 1:
power_func = tf.identity
elif cfg.stp_emb_iq_contour_exp == 2:
power_func = tf.square
else:
raise NotImplementedError()
if cfg.stp_emb_iq_contour_comp == "product":
comp_func = tf.multiply
elif cfg.stp_emb_iq_contour_comp == "quotient":
comp_func = lambda x, y: tf.divide(x, y + 1e-6)
else:
raise NotImplementedError()
stp_emb_iq_contour_penalty = weighted_avg(
power_func(
tf.maximum(
cfg.stp_emb_iq_contour_margin - comp_func(
stp_emb_iq_dnotes, stp_emb_iq_dlatents), 0)),
None if stp_varlen_mask is None else stp_varlen_mask[:, 1:])
# Regularize to maintain note consistency
stp_emb_iq_note_held = tf.cast(
tf.equal(pitches[:, 1:] - pitches[:, :-1], 0), tf.float32)
if cfg.stp_emb_iq_deviate_exp == 1:
power_func = tf.abs
elif cfg.stp_emb_iq_deviate_exp == 2:
power_func = tf.square
if stp_varlen_mask is None:
mask = stp_emb_iq_note_held
else:
mask = stp_varlen_mask[:, 1:] * stp_emb_iq_note_held
stp_emb_iq_deviate_penalty = weighted_avg(
power_func(stp_emb_iq_dlatents), mask)
# Calculate perplexity of discrete encoder posterior
if stp_varlen_mask is None:
mask = stp_emb_iq_inrange_mask
else:
mask = stp_varlen_mask * stp_emb_iq_inrange_mask
stp_emb_iq_discrete_oh = tf.one_hot(stp_emb_iq_discrete,
cfg.stp_emb_iq_nbins)
stp_emb_iq_avg_probs = weighted_avg(
stp_emb_iq_discrete_oh,
mask,
axis=[0, 1],
expand_mask=True)
stp_emb_iq_discrete_ppl = tf.exp(-tf.reduce_sum(
stp_emb_iq_avg_probs * tf.log(stp_emb_iq_avg_probs + 1e-10)))
out_dict["stp_emb_iq_quantized"] = stp_emb_iq_quantized
out_dict["stp_emb_iq_discrete"] = stp_emb_iq_discrete
out_dict["stp_emb_iq_valid_p"] = stp_emb_iq_valid_p
out_dict["stp_emb_iq_range_penalty"] = stp_emb_iq_range_penalty
out_dict["stp_emb_iq_contour_penalty"] = stp_emb_iq_contour_penalty
out_dict["stp_emb_iq_deviate_penalty"] = stp_emb_iq_deviate_penalty
out_dict["stp_emb_iq_discrete_ppl"] = stp_emb_iq_discrete_ppl
latents.append(stp_emb_iq_quantized)
# This tensor converts discrete values to continuous.
# It should *never* be used during training.
out_dict["stp_emb_iq_quantized_lookup"] = tf.expand_dims(
2. * (stp_emb_iq_discrete_f / (cfg.stp_emb_iq_nbins - 1.)) - 1., axis=2)
# Sequence embedding (single vector per sequence)
if cfg.seq_emb_unconstrained:
with tf.variable_scope("seq_emb_unconstrained"):
seq_emb_unconstrained = tf.layers.dense(
enc_seq, cfg.seq_emb_unconstrained_embedding_dim)
out_dict["seq_emb_unconstrained"] = seq_emb_unconstrained
seq_emb_unconstrained = tf.stack([seq_emb_unconstrained] * seq_len, axis=1)
latents.append(seq_emb_unconstrained)
# Sequence embeddings (variational w/ reparameterization trick)
if cfg.seq_emb_vae:
with tf.variable_scope("seq_emb_vae"):
seq_emb_vae = tf.layers.dense(enc_seq, cfg.seq_emb_vae_embedding_dim * 2)
mean = seq_emb_vae[:, :cfg.seq_emb_vae_embedding_dim]
stddev = 1e-6 + tf.nn.softplus(
seq_emb_vae[:, cfg.seq_emb_vae_embedding_dim:])
seq_emb_vae = mean + stddev * tf.random_normal(
tf.shape(mean), 0, 1, dtype=dtype)
kl = tf.reduce_mean(0.5 * tf.reduce_sum(
tf.square(mean) + tf.square(stddev) - tf.log(1e-8 + tf.square(stddev))
- 1,
axis=1))
out_dict["seq_emb_vae"] = seq_emb_vae
out_dict["seq_emb_vae_kl"] = kl
seq_emb_vae = tf.stack([seq_emb_vae] * seq_len, axis=1)
latents.append(seq_emb_vae)
# Low-rate embeddings
if cfg.lor_emb_unconstrained:
assert seq_len % cfg.lor_emb_n == 0
with tf.variable_scope("lor_emb_unconstrained"):
# Downsample step embeddings
rnn_embedding_dim = int(enc_stp.get_shape()[-1])
enc_lor = tf.reshape(enc_stp, [
batch_size, seq_len // cfg.lor_emb_n,
cfg.lor_emb_n * rnn_embedding_dim
])
lor_emb_unconstrained = tf.layers.dense(
enc_lor, cfg.lor_emb_unconstrained_embedding_dim)
out_dict["lor_emb_unconstrained"] = lor_emb_unconstrained
# Upsample lo-rate embeddings for decoding
lor_emb_unconstrained = tf.expand_dims(lor_emb_unconstrained, axis=2)
lor_emb_unconstrained = tf.tile(lor_emb_unconstrained,
[1, 1, cfg.lor_emb_n, 1])
lor_emb_unconstrained = tf.reshape(
lor_emb_unconstrained,
[batch_size, seq_len, cfg.lor_emb_unconstrained_embedding_dim])
latents.append(lor_emb_unconstrained)
# Build decoder features
dec_feats = latents
if cfg.dec_autoregressive:
# Retrieve pitch numbers
curr_pitches = pitches
last_pitches = curr_pitches[:, :-1]
last_pitches = tf.pad(
last_pitches, [[0, 0], [1, 0]],
constant_values=-1) # Prepend <SOS> token
out_dict["dec_last_pitches"] = last_pitches
dec_feats.append(tf.one_hot(last_pitches + 1, 89))
if cfg.dec_pred_velocity:
curr_velocities = velocities
last_velocities = curr_velocities[:, :-1]
last_velocities = tf.pad(last_velocities, [[0, 0], [1, 0]])
dec_feats.append(
tf.one_hot(last_velocities, cfg.data_max_discrete_velocities + 1))
if "delta_times_int" in cfg.dec_aux_feats:
dec_feats.append(
tf.one_hot(feat_dict["delta_times_int"],
cfg.data_max_discrete_times + 1))
if "velocities" in cfg.dec_aux_feats:
assert not cfg.dec_pred_velocity
dec_feats.append(
tf.one_hot(feat_dict["velocities"],
cfg.data_max_discrete_velocities + 1))
assert dec_feats
dec_feats = tf.concat(dec_feats, axis=2)
# Decode
with tf.variable_scope("decoder"):
dec_stp, dec_initial_state, dec_final_state = simple_lstm_decoder(
dec_feats,
seq_lens,
batch_size,
rnn_celltype=cfg.rnn_celltype,
rnn_nlayers=cfg.rnn_nlayers,
rnn_nunits=cfg.rnn_nunits)
with tf.variable_scope("pitches"):
dec_recons_logits = tf.layers.dense(dec_stp, 88)
dec_recons_loss = weighted_avg(
tf.nn.sparse_softmax_cross_entropy_with_logits(
logits=dec_recons_logits, labels=pitches), stp_varlen_mask)
out_dict["dec_initial_state"] = dec_initial_state
out_dict["dec_final_state"] = dec_final_state
out_dict["dec_recons_logits"] = dec_recons_logits
out_dict["dec_recons_scores"] = tf.nn.softmax(dec_recons_logits, axis=-1)
out_dict["dec_recons_preds"] = tf.argmax(
dec_recons_logits, output_type=tf.int32, axis=-1)
out_dict["dec_recons_midi_preds"] = util.remidify(
out_dict["dec_recons_preds"])
out_dict["dec_recons_loss"] = dec_recons_loss
if cfg.dec_pred_velocity:
with tf.variable_scope("velocities"):
dec_recons_velocity_logits = tf.layers.dense(
dec_stp, cfg.data_max_discrete_velocities + 1)
dec_recons_velocity_loss = weighted_avg(
tf.nn.sparse_softmax_cross_entropy_with_logits(
logits=dec_recons_velocity_logits, labels=velocities),
stp_varlen_mask)
out_dict["dec_recons_velocity_logits"] = dec_recons_velocity_logits
out_dict["dec_recons_velocity_loss"] = dec_recons_velocity_loss
# Stats
if cfg.stp_emb_vq or cfg.stp_emb_iq:
discrete = out_dict[
"stp_emb_vq_discrete" if cfg.stp_emb_vq else "stp_emb_iq_discrete"]
dx = pitches[:, 1:] - pitches[:, :-1]
dy = discrete[:, 1:] - discrete[:, :-1]
contour_violation = tf.reduce_mean(tf.cast(tf.less(dx * dy, 0), tf.float32))
dx_hold = tf.equal(dx, 0)
deviate_violation = weighted_avg(
tf.cast(tf.not_equal(dy, 0), tf.float32), tf.cast(dx_hold, tf.float32))
out_dict["contour_violation"] = contour_violation
out_dict["deviate_violation"] = deviate_violation
return out_dict
def build():
"""Builds the Tensorflow graph."""
inputs, labels, lengths = None, None, None
if mode in ('train', 'eval'):
if isinstance(no_event_label, numbers.Number):
label_shape = []
else:
label_shape = [len(no_event_label)]
inputs, labels, lengths = magenta.common.get_padded_batch(
sequence_example_file_paths, hparams.batch_size, input_size,
label_shape=label_shape, shuffle=mode == 'train')
elif mode == 'generate':
inputs = tf.placeholder(tf.float32, [hparams.batch_size, None,
input_size])
if isinstance(encoder_decoder,
magenta.music.OneHotIndexEventSequenceEncoderDecoder):
expanded_inputs = tf.one_hot(
tf.cast(tf.squeeze(inputs, axis=-1), tf.int64),
encoder_decoder.input_depth)
else:
expanded_inputs = inputs
dropout_keep_prob = 1.0 if mode == 'generate' else hparams.dropout_keep_prob
if hparams.use_cudnn:
outputs, initial_state, final_state = make_cudnn(
expanded_inputs, hparams.rnn_layer_sizes, hparams.batch_size, mode,
dropout_keep_prob=dropout_keep_prob,
residual_connections=hparams.residual_connections)
else:
cell = make_rnn_cell(
hparams.rnn_layer_sizes,
dropout_keep_prob=dropout_keep_prob,
attn_length=hparams.attn_length,
residual_connections=hparams.residual_connections)
initial_state = cell.zero_state(hparams.batch_size, tf.float32)
outputs, final_state = tf.nn.dynamic_rnn(
cell, inputs, sequence_length=lengths, initial_state=initial_state,
swap_memory=True)
outputs_flat = magenta.common.flatten_maybe_padded_sequences(
outputs, lengths)
if isinstance(num_classes, numbers.Number):
num_logits = num_classes
else:
num_logits = sum(num_classes)
logits_flat = contrib_layers.linear(outputs_flat, num_logits)
if mode in ('train', 'eval'):
labels_flat = magenta.common.flatten_maybe_padded_sequences(
labels, lengths)
if isinstance(num_classes, numbers.Number):
softmax_cross_entropy = tf.nn.sparse_softmax_cross_entropy_with_logits(
labels=labels_flat, logits=logits_flat)
predictions_flat = tf.argmax(logits_flat, axis=1)
else:
logits_offsets = np.cumsum([0] + num_classes)
softmax_cross_entropy = []
predictions = []
for i in range(len(num_classes)):
softmax_cross_entropy.append(
tf.nn.sparse_softmax_cross_entropy_with_logits(
labels=labels_flat[:, i],
logits=logits_flat[
:, logits_offsets[i]:logits_offsets[i + 1]]))
predictions.append(
tf.argmax(logits_flat[
:, logits_offsets[i]:logits_offsets[i + 1]], axis=1))
predictions_flat = tf.stack(predictions, 1)
correct_predictions = tf.to_float(
tf.equal(labels_flat, predictions_flat))
event_positions = tf.to_float(tf.not_equal(labels_flat, no_event_label))
no_event_positions = tf.to_float(tf.equal(labels_flat, no_event_label))
# Compute the total number of time steps across all sequences in the
# batch. For some models this will be different from the number of RNN
# steps.
def batch_labels_to_num_steps(batch_labels, lengths):
num_steps = 0
for labels, length in zip(batch_labels, lengths):
num_steps += encoder_decoder.labels_to_num_steps(labels[:length])
return np.float32(num_steps)
num_steps = tf.py_func(
batch_labels_to_num_steps, [labels, lengths], tf.float32)
if mode == 'train':
loss = tf.reduce_mean(softmax_cross_entropy)
perplexity = tf.exp(loss)
accuracy = tf.reduce_mean(correct_predictions)
event_accuracy = (
tf.reduce_sum(correct_predictions * event_positions) /
tf.reduce_sum(event_positions))
no_event_accuracy = (
tf.reduce_sum(correct_predictions * no_event_positions) /
tf.reduce_sum(no_event_positions))
loss_per_step = tf.reduce_sum(softmax_cross_entropy) / num_steps
perplexity_per_step = tf.exp(loss_per_step)
optimizer = tf.train.AdamOptimizer(learning_rate=hparams.learning_rate)
train_op = contrib_slim.learning.create_train_op(
loss, optimizer, clip_gradient_norm=hparams.clip_norm)
tf.add_to_collection('train_op', train_op)
vars_to_summarize = {
'loss': loss,
'metrics/perplexity': perplexity,
'metrics/accuracy': accuracy,
'metrics/event_accuracy': event_accuracy,
'metrics/no_event_accuracy': no_event_accuracy,
'metrics/loss_per_step': loss_per_step,
'metrics/perplexity_per_step': perplexity_per_step,
}
elif mode == 'eval':
vars_to_summarize, update_ops = contrib_metrics.aggregate_metric_map({
'loss':
tf.metrics.mean(softmax_cross_entropy),
'metrics/accuracy':
tf.metrics.accuracy(labels_flat, predictions_flat),
'metrics/per_class_accuracy':
tf.metrics.mean_per_class_accuracy(labels_flat,
predictions_flat,
num_classes),
'metrics/event_accuracy':
tf.metrics.recall(event_positions, correct_predictions),
'metrics/no_event_accuracy':
tf.metrics.recall(no_event_positions, correct_predictions),
'metrics/loss_per_step':
tf.metrics.mean(
tf.reduce_sum(softmax_cross_entropy) / num_steps,
weights=num_steps),
})
for updates_op in update_ops.values():
tf.add_to_collection('eval_ops', updates_op)
# Perplexity is just exp(loss) and doesn't need its own update op.
vars_to_summarize['metrics/perplexity'] = tf.exp(
vars_to_summarize['loss'])
vars_to_summarize['metrics/perplexity_per_step'] = tf.exp(
vars_to_summarize['metrics/loss_per_step'])
for var_name, var_value in six.iteritems(vars_to_summarize):
tf.summary.scalar(var_name, var_value)
tf.add_to_collection(var_name, var_value)
elif mode == 'generate':
temperature = tf.placeholder(tf.float32, [])
if isinstance(num_classes, numbers.Number):
softmax_flat = tf.nn.softmax(
tf.div(logits_flat, tf.fill([num_classes], temperature)))
softmax = tf.reshape(
softmax_flat, [hparams.batch_size, -1, num_classes])
else:
logits_offsets = np.cumsum([0] + num_classes)
softmax = []
for i in range(len(num_classes)):
sm = tf.nn.softmax(
tf.div(
logits_flat[:, logits_offsets[i]:logits_offsets[i + 1]],
tf.fill([num_classes[i]], temperature)))
sm = tf.reshape(sm, [hparams.batch_size, -1, num_classes[i]])
softmax.append(sm)
tf.add_to_collection('inputs', inputs)
tf.add_to_collection('temperature', temperature)
tf.add_to_collection('softmax', softmax)
# Flatten state tuples for metagraph compatibility.
for state in tf_nest.flatten(initial_state):
tf.add_to_collection('initial_state', state)
for state in tf_nest.flatten(final_state):
tf.add_to_collection('final_state', state)
def test_ne(self):
input1 = tf.placeholder(shape=(4, 32, 32, 3), dtype=tf.float32)
input2 = tf.placeholder(shape=(4, 32, 32, 3), dtype=tf.float32)
output = tf.not_equal(input1, input2)
self._test_conversion('ne', [input1, input2], [output])
def build_distractors(distractor_examples, context):
"""Create inputs with distractors."""
CLS_ID = tf.constant([101], dtype=tf.int64) # pylint: disable=invalid-name
SEP_ID = tf.constant([102], dtype=tf.int64) # pylint: disable=invalid-name
bert_inputs = []
input_masks = []
segment_ids = []
# for each distractor
sample_size = int(
(FLAGS.num_choices - FLAGS.k_size) / (FLAGS.data_window_size - 1))
for example in distractor_examples:
# randomly sample 7
intermediate_examples_tensor = tf.reduce_sum(tf.abs(example), 1)
examples_zero_vector = tf.zeros(shape=(1, 1), dtype=tf.int64)
examples_bool_mask = tf.squeeze(
tf.not_equal(intermediate_examples_tensor, examples_zero_vector))
paragraph_len = tf.reduce_sum(tf.cast(examples_bool_mask, tf.int32))
indices = tf.range(0, limit=paragraph_len, dtype=tf.int32)
shuffled_indices = tf.random.shuffle(indices)[:sample_size]
# extend examples / targets
distractor_cand = example
distractor_cand_plus_one = distractor_cand[1:]
distractor_cand_plus_two = distractor_cand[2:]
# pad extensions
paddings_one = tf.constant([[0, 1], [0, 0]])
distractor_cand_plus_one = tf.pad(distractor_cand_plus_one, paddings_one)
paddings_two = tf.constant([[0, 2], [0, 0]])
distractor_cand_plus_two = tf.pad(distractor_cand_plus_two, paddings_two)
distractor_cand_ext = tf.concat(
[distractor_cand, distractor_cand_plus_one, distractor_cand_plus_two],
axis=1)
distractors = tf.gather(distractor_cand_ext, shuffled_indices)
for i in range(sample_size):
distractors_non_zero = tf.where(
tf.not_equal(distractors[i], tf.zeros_like(distractors[i])))
distractors_stripped = tf.gather_nd(distractors[i], distractors_non_zero)
if FLAGS.include_context:
segment_id = tf.concat([
tf.zeros_like(CLS_ID, dtype=tf.int64),
tf.zeros_like(context),
tf.zeros_like(SEP_ID, dtype=tf.int64),
tf.ones_like(distractors_stripped),
tf.ones_like(SEP_ID, dtype=tf.int64)
],
axis=0)
else:
segment_id = tf.concat([
tf.zeros_like(CLS_ID, dtype=tf.int64),
tf.zeros_like(distractors_stripped),
tf.zeros_like(SEP_ID, dtype=tf.int64)
],
axis=0)
segment_id = pad_and_cut(segment_id, FLAGS.max_seq_length)
segment_ids.append(segment_id)
if FLAGS.include_context:
new_input = tf.concat(
[CLS_ID, context, SEP_ID, distractors_stripped, SEP_ID], axis=0)
else:
new_input = tf.concat([CLS_ID, distractors_stripped, SEP_ID], axis=0)
input_mask = tf.ones_like(new_input)
input_mask = pad_and_cut(input_mask, FLAGS.max_seq_length)
input_masks.append(input_mask)
padded_new_input = pad_and_cut(new_input, FLAGS.max_seq_length)
bert_inputs.append(padded_new_input)
bert_inputs = tf.stack(bert_inputs, axis=0)
input_masks = tf.stack(input_masks, axis=0)
segment_ids = tf.stack(segment_ids, axis=0)
out = Outputs_And_Context(bert_inputs, input_masks, segment_ids, None, None)
return out
def create_mobile_mask(input_mask):
return tf.reduce_all(tf.not_equal(0, input_mask),
axis=2,
keepdims=True)
def fn_not_eos():
return tf.not_equal( # Check if the last predicted element is a EOS
tf.squeeze(result[:, -1, :, :]), text_encoder.EOS_ID)
def call(self,
yesno_logits,
yesno_labels,
supporting_fact_logits,
supporting_fact_labels,
block_ids,
num_replicas=None,
eps=0):
"""Calls the layer.
Args:
yesno_logits: <float32>[batch_size, 3] Logits per position.
supporting_fact_logits: <float32>[batch_size] Logits per position fro
supporting facts classification.
block_ids: <int32>[batch_size] Block IDs of every sample in the batch.
num_replicas: Number of replicas to gather summaries from. If None
(default) then cross-replicas summaries are not used.
eps: <float> Small constant for numerical stability.
Returns:
total_loss: <float>
"""
batch_size = tf.shape(supporting_fact_logits)[0]
supporting_fact_logits = tf.expand_dims(supporting_fact_logits, 1)
supporting_fact_labels = tf.expand_dims(supporting_fact_labels, 1)
example_mask = tf.cast(tf.expand_dims(tf.not_equal(block_ids, 0), 1),
tf.float32)
# (1) Aggregate block_ids across global batch. Compute cross block mask.
all_block_ids = block_ids
if num_replicas:
all_block_ids = tpu_utils.cross_replica_concat(
tensor=all_block_ids,
num_replicas=num_replicas,
name='block_ids_concat')
# [batch_size, global_batch_size]
cross_blocks_eq_mask = tf.cast(
tf.equal(tf.expand_dims(block_ids, 1),
tf.expand_dims(all_block_ids, 0)), tf.float32)
# (2) Apply softmax over all positions in the (global) batch
# across the blocks with the same `block_id`.
# [batch_size, 3, 1]
yes_no_span_probs = losses.cross_batch_softmax(
tf.expand_dims(yesno_logits, 2), cross_blocks_eq_mask,
num_replicas)
yes_no_span_probs = tf.squeeze(yes_no_span_probs, 2)
# [batch_size, 1]
supporting_facts_probs = losses.cross_batch_softmax(
tf.expand_dims(supporting_fact_logits, 2), cross_blocks_eq_mask,
num_replicas)
supporting_facts_probs = tf.squeeze(supporting_facts_probs, 2)
# (3) Prepare one-hot labels based on annotation begins and ends
supporting_fact_labels = tf.cast(supporting_fact_labels, tf.float32)
# [batch_size, 3]
yes_no_span_one_hot = tf.one_hot(yesno_labels,
depth=3,
dtype=tf.float32)
yes_no_span_one_hot = yes_no_span_one_hot * supporting_fact_labels
# (4) Compute the probability of the current begin / end positions across
# the blocks with the same `block_id`.
def mean_loss(all_losses):
return tf.reduce_sum(all_losses * example_mask) / (
tf.reduce_sum(example_mask) + eps)
supporting_facts_loss = -mean_loss(
tf.log(supporting_facts_probs * supporting_fact_labels + eps))
yes_no_span_loss = -mean_loss(
tf.log(yes_no_span_probs * yes_no_span_one_hot + eps))
return yes_no_span_loss, supporting_facts_loss
def _create_inference(self):
"""
Inference used for learning model parameters
"""
# Mapped embeddings for users (u^c, u^i and u^s)
self.u_c = tf.nn.embedding_lookup(self.uw_c, self.input_u)
self.u_c = tf.reshape(self.u_c, [-1, self.embedding_size])
self.u_i = tf.nn.embedding_lookup(self.uw_i, self.input_u)
self.u_i = tf.reshape(self.u_i, [-1, self.embedding_size])
self.u_s = tf.nn.embedding_lookup(self.uw_s, self.input_u)
self.u_s = tf.reshape(self.u_s, [-1, self.embedding_size])
# Our contribution (haven't added u^c2 because I figured, if we use the same u^c, we essentially use
# shared knowledge between all domains. Maybe that is favorable?
# TODO: We could test with only sharing between item domain and questionnaire domain.
self.u_q = tf.nn.embedding_lookup(self.uw_q, self.input_u)
self.u_q = tf.reshape(self.u_q, [-1, self.embedding_size])
# Attentive transferred embeddings for users (p^I_u and p^S_u)
self.P_iu, self.item_w = self._item_attentive_transfer()
self.P_su, self.social_w = self._social_attentive_transfer()
# Our contribution
self.P_qu, self.question_w = self._questionnaire_attentive_transfer()
# adding dropout on transferred embeddings to avoid overfitting
self.P_iu = tf.nn.dropout(self.P_iu, self.dropout_keep_prob)
self.P_su = tf.nn.dropout(self.P_su, self.dropout_keep_prob)
self.P_qu = tf.nn.dropout(self.P_qu, self.dropout_keep_prob)
# Looking up item embeddings from data
self.pos_item = tf.nn.embedding_lookup(self.Q, self.input_ur)
# Items used for this inference
self.pos_n_ratings = tf.cast(tf.not_equal(self.input_ur, self.n_items),
'float32')
# Performing matrix multiplication to obtain item embeddings for this inference
self.pos_item = tf.einsum('ab,abc->abc', self.pos_n_ratings,
self.pos_item)
# Transferred embeddings for items multiplied with item embeddings
self.pos_r = tf.einsum('ac,abc->abc', self.P_iu, self.pos_item)
# Need to multiply with H_i as well
self.pos_r = tf.einsum('ajk,kl->ajl', self.pos_r, self.H_i)
self.pos_r = tf.reshape(self.pos_r, [-1, max_items])
# Social embeddings lookup
self.pos_friend = tf.nn.embedding_lookup(self.G, self.input_uf)
# Social interactions used for this inference
self.pos_n_friends = tf.cast(tf.not_equal(self.input_uf, self.n_users),
'float32')
# Obtaining embeddings for socials used in this inference
self.pos_friend = tf.einsum('ab,abc->abc', self.pos_n_friends,
self.pos_friend)
# Multiplying with social attentive transferred user embeddings
self.pos_f = tf.einsum('ac,abc->abc', self.P_su, self.pos_friend)
# Need to multiply with H_s as well
self.pos_f = tf.einsum('abc,cd->abd', self.pos_friend, self.H_s)
self.pos_f = tf.reshape(self.pos_f, [-1, max_friends])
# Questionnaire embeddings lookup
self.pos_questions = tf.nn.embedding_lookup(self.V, self.input_uq)
# Answered questions for this inference
self.pos_n_questions = tf.cast(
tf.not_equal(self.input_uq, self.n_items),
'float32') # consider if this should numbers of questions instead?
# Obtaining embeddings for questions used in this inference
self.pos_questions = tf.einsum('ab,abc->abc', self.pos_n_questions,
self.pos_questions)
# Multiplying with question attentive transferred user embeddings
self.pos_q = tf.einsum('ac,abc->abc', self.P_qu, self.pos_questions)
# Need to multiply with H_q as well
self.pos_q = tf.einsum('abc,cd->abd', self.pos_questions, self.H_q)
self.pos_q = tf.reshape(self.pos_q, [-1, self.max_questions])
def _loss_function(conf_gt, conf_logits, reg_gt, reg_logits, config):
"""
Creates the PPN loss function.
Returns (conf_loss, point_loss)
conf_gt:
Ground truth confidence, i.e. 1 for close anchors, 0 for anchors
that are too far off and -1 for anchors to be ignored. Must have
shape (?, fh, fw, k).
conf_logits:
PPN confidence output, must have shape (?, fh, fw, k).
reg_gt:
Ground truth point offsets, need only have valid values for the
anchors with conf_gt of 1. Must have shape (?, fh, fw, 2k).
reg_logits:
PPN anchor offset output, must have shape (?, fh, fw, 2k).
config
The configuration dictionary. See ppn.config.ppn_config.
"""
import tensorflow.compat.v1 as tf
# mask out the invalid anchors:
# only penalize confidence of valid (i.e. not ignored) anchors
# only penalize points of positive anchors
valid_mask = tf.stop_gradient(tf.not_equal(conf_gt, -1))
pos_mask = tf.stop_gradient(tf.equal(conf_gt, 1))
num_valid = tf.stop_gradient(tf.count_nonzero(valid_mask, dtype=tf.int32))
num_pos = tf.stop_gradient(tf.count_nonzero(pos_mask, dtype=tf.int32))
valid_conf_gt = tf.boolean_mask(conf_gt, valid_mask)
valid_conf_logits = tf.boolean_mask(conf_logits, valid_mask)
pos_reg_gt = tf.boolean_mask(reg_gt, pos_mask)
pos_reg_logits = tf.boolean_mask(reg_logits, pos_mask)
if config['loss_function'] == 'crossentropy':
# get the confidence loss using sigmoidal cross entropy
conf_loss = tf.nn.sigmoid_cross_entropy_with_logits(
labels=tf.cast(valid_conf_gt, tf.float32),
logits=valid_conf_logits)
else:
# get the confidence loss using focal loss
conf_loss = _binary_focal_loss_with_logits(
labels=tf.cast(valid_conf_gt, tf.float32),
logits=valid_conf_logits,
gamma=config['focal_gamma'],
pos_weight=config['focal_pos_weight'])
if config['focal_normalized']:
# normalize according to number of positive anchors
conf_loss = conf_loss / tf.cast(num_valid, tf.float32)
conf_loss = tf.reduce_sum(conf_loss)
# get the point loss using MSE
point_loss = tf.losses.mean_squared_error(
labels=pos_reg_gt,
predictions=pos_reg_logits,
reduction=tf.losses.Reduction.SUM)
# zero out the losses if there were no valid points
conf_loss = tf.where(tf.equal(num_valid, 0),
0.0,
conf_loss,
name='conf_loss')
point_loss = tf.where(tf.equal(num_pos, 0),
0.0,
point_loss,
name='point_loss')
# normalize losses to contribute equally and add
N_conf, N_reg = config['N_conf'], config['N_reg']
return ((1.0/N_conf) * conf_loss, (1.0/N_reg) * point_loss)