def test_running_test_no_val(tmpdir):
"""Verify `test()` works on a model with no `val_loader`."""
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
# fit model
trainer = Trainer(progress_bar_refresh_rate=0,
max_epochs=1,
train_percent_check=0.4,
val_percent_check=0.2,
test_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger,
early_stop_callback=False)
result = trainer.fit(model)
assert result == 1, 'training failed to complete'
trainer.test()
# test we have good test accuracy
tutils.assert_ok_model_acc(trainer)
def test_no_val_end_module(tmpdir):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# fit model
trainer = Trainer(
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir)
)
result = trainer.fit(model)
# traning complete
assert result == 1, 'amp + ddp model failed to complete'
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# load new model
hparams_path = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(hparams_path, 'hparams.yaml')
model_2 = EvalModelTemplate.load_from_checkpoint(
checkpoint_path=new_weights_path,
hparams_file=hparams_path
)
model_2.eval()
def test_running_test_after_fitting(tmpdir):
"""Verify test() on fitted model."""
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
# fit model
trainer = Trainer(default_root_dir=tmpdir,
progress_bar_refresh_rate=0,
max_epochs=8,
train_percent_check=0.4,
val_percent_check=0.2,
test_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger)
result = trainer.fit(model)
assert result == 1, 'training failed to complete'
trainer.test()
# test we have good test accuracy
tutils.assert_ok_model_acc(trainer, thr=0.5)
def test_no_val_module(tmpdir):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
trainer = Trainer(max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir))
# fit model
result = trainer.fit(model)
# training complete
assert result == 1, 'amp + ddp model failed to complete'
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# assert ckpt has hparams
ckpt = torch.load(new_weights_path)
assert CHECKPOINT_KEY_MODULE_ARGS in ckpt.keys(
), 'module_arguments missing from checkpoints'
# load new model
hparams_path = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(hparams_path, 'hparams.yaml')
model_2 = EvalModelTemplate.load_from_checkpoint(
checkpoint_path=new_weights_path, hparams_file=hparams_path)
model_2.eval()
def test_no_val_module(tmpdir):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
hparams = tutils.get_default_hparams()
class CurrentTestModel(LightTrainDataloader, TestModelBase):
pass
model = CurrentTestModel(hparams)
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
trainer = Trainer(max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir))
# fit model
result = trainer.fit(model)
# training complete
assert result == 1, 'amp + ddp model failed to complete'
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# assert ckpt has hparams
ckpt = torch.load(new_weights_path)
assert 'hparams' in ckpt.keys(), 'hparams missing from checkpoints'
# won't load without hparams in the ckpt
model_2 = LightningTestModel.load_from_checkpoint(
checkpoint_path=new_weights_path, )
model_2.eval()
def test_running_test_pretrained_model_cpu(tmpdir):
"""Verify test() on pretrained model."""
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
trainer_options = dict(progress_bar_refresh_rate=0,
max_epochs=3,
limit_train_batches=0.4,
limit_val_batches=0.2,
checkpoint_callback=checkpoint,
logger=logger)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
pretrained_model = tutils.load_model(logger,
trainer.checkpoint_callback.dirpath,
module_class=EvalModelTemplate)
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
# test we have good test accuracy
tutils.assert_ok_model_acc(new_trainer)
def test_amp_gpu_ddp_slurm_managed(tmpdir):
"""Make sure DDP + AMP work."""
# simulate setting slurm flags
tutils.set_random_master_port()
os.environ['SLURM_LOCALID'] = str(0)
model = EvalModelTemplate(tutils.get_default_hparams())
# exp file to get meta
logger = tutils.get_default_logger(tmpdir)
# exp file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
# fit model
trainer = Trainer(
max_epochs=1,
gpus=[0],
distributed_backend='ddp',
precision=16,
checkpoint_callback=checkpoint,
logger=logger,
)
trainer.is_slurm_managing_tasks = True
result = trainer.fit(model)
# correct result and ok accuracy
assert result == 1, 'amp + ddp model failed to complete'
# test root model address
assert trainer.resolve_root_node_address('abc') == 'abc'
assert trainer.resolve_root_node_address('abc[23]') == 'abc23'
assert trainer.resolve_root_node_address('abc[23-24]') == 'abc23'
assert trainer.resolve_root_node_address(
'abc[23-24, 45-40, 40]') == 'abc23'
def test_no_val_end_module(tmpdir):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
class CurrentTestModel(LightTrainDataloader, LightValidationStepMixin,
TestModelBase):
pass
hparams = tutils.get_default_hparams()
model = CurrentTestModel(hparams)
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# fit model
trainer = Trainer(max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir))
result = trainer.fit(model)
# traning complete
assert result == 1, 'amp + ddp model failed to complete'
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# load new model
tags_path = tutils.get_data_path(logger, path_dir=tmpdir)
tags_path = os.path.join(tags_path, 'meta_tags.csv')
model_2 = LightningTestModel.load_from_checkpoint(
checkpoint_path=new_weights_path, tags_csv=tags_path)
model_2.eval()
def test_no_val_end_module(monkeypatch, tmpdir, tmpdir_server, url_ckpt):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
# set $TORCH_HOME, which determines torch hub's cache path, to tmpdir
monkeypatch.setenv('TORCH_HOME', tmpdir)
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# fit model
trainer = Trainer(max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir))
result = trainer.fit(model)
# traning complete
assert result == 1, 'amp + ddp model failed to complete'
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# load new model
hparams_path = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(hparams_path, 'hparams.yaml')
ckpt_path = f'http://{tmpdir_server[0]}:{tmpdir_server[1]}/{os.path.basename(new_weights_path)}' if url_ckpt else new_weights_path
model_2 = EvalModelTemplate.load_from_checkpoint(checkpoint_path=ckpt_path,
hparams_file=hparams_path)
model_2.eval()
def test_loading_meta_tags(tmpdir):
""" test for backward compatibility to meta_tags.csv """
tutils.reset_seed()
hparams = EvalModelTemplate.get_default_hparams()
# save tags
logger = tutils.get_default_logger(tmpdir)
logger.log_hyperparams(Namespace(some_str='a_str', an_int=1, a_float=2.0))
logger.log_hyperparams(hparams)
logger.save()
# load hparams
path_expt_dir = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(path_expt_dir,
TensorBoardLogger.NAME_HPARAMS_FILE)
hparams = load_hparams_from_yaml(hparams_path)
# save as legacy meta_tags.csv
tags_path = os.path.join(path_expt_dir, 'meta_tags.csv')
save_hparams_to_tags_csv(tags_path, hparams)
tags = load_hparams_from_tags_csv(tags_path)
assert hparams == tags
def test_running_test_no_val(tmpdir):
"""Verify `test()` works on a model with no `val_loader`."""
tutils.reset_seed()
class CurrentTestModel(LightTrainDataloader, LightTestMixin,
TestModelBase):
pass
hparams = tutils.get_default_hparams()
model = CurrentTestModel(hparams)
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
# fit model
trainer = Trainer(progress_bar_refresh_rate=0,
max_epochs=1,
train_percent_check=0.4,
val_percent_check=0.2,
test_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger,
early_stop_callback=False)
result = trainer.fit(model)
assert result == 1, 'training failed to complete'
trainer.test()
# test we have good test accuracy
tutils.assert_ok_model_acc(trainer)
def test_running_test_pretrained_model_cpu(tmpdir):
"""Verify test() on pretrained model."""
tutils.reset_seed()
hparams = tutils.get_default_hparams()
model = LightningTestModel(hparams)
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
trainer_options = dict(progress_bar_refresh_rate=0,
max_epochs=4,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
pretrained_model = tutils.load_model(logger,
trainer.checkpoint_callback.dirpath,
module_class=LightningTestModel)
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
# test we have good test accuracy
tutils.assert_ok_model_acc(new_trainer)
def test_model_saving_loading(tmpdir):
"""Tests use case where trainer saves the model, and user loads it from tags independently."""
model = EvalModelTemplate()
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
trainer_options = dict(
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir)
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# traning complete
assert result == 1, 'amp + ddp model failed to complete'
# make a prediction
dataloaders = model.test_dataloader()
if not isinstance(dataloaders, list):
dataloaders = [dataloaders]
for dataloader in dataloaders:
for batch in dataloader:
break
x, y = batch
x = x.view(x.size(0), -1)
# generate preds before saving model
model.eval()
pred_before_saving = model(x)
# save model
new_weights_path = os.path.join(tmpdir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# load new model
hparams_path = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(hparams_path, 'hparams.yaml')
model_2 = EvalModelTemplate.load_from_checkpoint(
checkpoint_path=new_weights_path,
hparams_file=hparams_path
)
model_2.eval()
# make prediction
# assert that both predictions are the same
new_pred = model_2(x)
assert torch.all(torch.eq(pred_before_saving, new_pred)).item() == 1
def test_running_test_pretrained_model_distrib(tmpdir, backend):
"""Verify `test()` on pretrained model."""
tutils.reset_seed()
tutils.set_random_master_port()
hparams = tutils.get_default_hparams()
model = LightningTestModel(hparams)
# exp file to get meta
logger = tutils.get_default_logger(tmpdir)
# exp file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
trainer_options = dict(
progress_bar_refresh_rate=0,
max_epochs=2,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger,
gpus=[0, 1],
distributed_backend=backend,
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
log.info(os.listdir(tutils.get_data_path(logger, path_dir=tmpdir)))
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
pretrained_model = tutils.load_model(logger,
trainer.checkpoint_callback.dirpath,
module_class=LightningTestModel)
# run test set
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
# test we have good test accuracy
tutils.assert_ok_model_acc(new_trainer)
dataloaders = model.test_dataloader()
if not isinstance(dataloaders, list):
dataloaders = [dataloaders]
for dataloader in dataloaders:
tutils.run_prediction(dataloader, pretrained_model)
def test_default_args(tmpdir):
"""Tests default argument parser for Trainer"""
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
parser = ArgumentParser(add_help=False)
args = parser.parse_args()
args.logger = logger
args.max_epochs = 5
trainer = Trainer.from_argparse_args(args)
assert isinstance(trainer, Trainer)
assert trainer.max_epochs == 5
def test_loading_meta_tags(tmpdir):
hparams = tutils.get_default_hparams()
# save tags
logger = tutils.get_default_logger(tmpdir)
logger.log_hyperparams(Namespace(some_str='a_str', an_int=1, a_float=2.0))
logger.log_hyperparams(hparams)
logger.save()
# load tags
path_expt_dir = tutils.get_data_path(logger, path_dir=tmpdir)
tags_path = os.path.join(path_expt_dir, 'meta_tags.csv')
tags = load_hparams_from_tags_csv(tags_path)
assert tags.batch_size == 32 and tags.hidden_dim == 1000
def test_loading_yaml(tmpdir):
tutils.reset_seed()
hparams = EvalModelTemplate.get_default_hparams()
# save tags
logger = tutils.get_default_logger(tmpdir)
logger.log_hyperparams(Namespace(some_str='a_str', an_int=1, a_float=2.0))
logger.log_hyperparams(hparams)
logger.save()
# load hparams
path_expt_dir = tutils.get_data_path(logger, path_dir=tmpdir)
hparams_path = os.path.join(path_expt_dir, 'hparams.yaml')
tags = load_hparams_from_yaml(hparams_path)
assert tags['batch_size'] == 32 and tags['hidden_dim'] == 1000
def test_dp_resume(tmpdir):
"""Make sure DP continues training correctly."""
hparams = EvalModelTemplate.get_default_hparams()
model = EvalModelTemplate(**hparams)
trainer_options = dict(
max_epochs=1,
gpus=2,
distributed_backend='dp',
)
# get logger
logger = tutils.get_default_logger(tmpdir)
# exp file to get weights
# logger file to get weights
checkpoint = tutils.init_checkpoint_callback(logger)
# add these to the trainer options
trainer_options['logger'] = logger
trainer_options['checkpoint_callback'] = checkpoint
# fit model
trainer = Trainer(**trainer_options)
trainer.is_slurm_managing_tasks = True
result = trainer.fit(model)
# track epoch before saving. Increment since we finished the current epoch, don't want to rerun
real_global_epoch = trainer.current_epoch + 1
# correct result and ok accuracy
assert result == 1, 'amp + dp model failed to complete'
# ---------------------------
# HPC LOAD/SAVE
# ---------------------------
# save
trainer.hpc_save(tmpdir, logger)
# init new trainer
new_logger = tutils.get_default_logger(tmpdir, version=logger.version)
trainer_options['logger'] = new_logger
trainer_options['checkpoint_callback'] = ModelCheckpoint(tmpdir)
trainer_options['limit_train_batches'] = 0.5
trainer_options['limit_val_batches'] = 0.2
trainer_options['max_epochs'] = 1
new_trainer = Trainer(**trainer_options)
# set the epoch start hook so we can predict before the model does the full training
def assert_good_acc():
assert new_trainer.current_epoch == real_global_epoch and new_trainer.current_epoch > 0
# if model and state loaded correctly, predictions will be good even though we
# haven't trained with the new loaded model
dp_model = new_trainer.model
dp_model.eval()
dataloader = trainer.train_dataloader
tutils.run_prediction(dataloader, dp_model, dp=True)
# new model
model = EvalModelTemplate(**hparams)
model.on_train_start = assert_good_acc
# fit new model which should load hpc weights
new_trainer.fit(model)
# test freeze on gpu
model.freeze()
model.unfreeze()
def test_cpu_slurm_save_load(tmpdir):
"""Verify model save/load/checkpoint on CPU."""
hparams = EvalModelTemplate.get_default_hparams()
model = EvalModelTemplate(hparams)
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
version = logger.version
# fit model
trainer = Trainer(max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir))
result = trainer.fit(model)
real_global_step = trainer.global_step
# traning complete
assert result == 1, 'cpu model failed to complete'
# predict with trained model before saving
# make a prediction
dataloaders = model.test_dataloader()
if not isinstance(dataloaders, list):
dataloaders = [dataloaders]
for dataloader in dataloaders:
for batch in dataloader:
break
x, y = batch
x = x.view(x.size(0), -1)
model.eval()
pred_before_saving = model(x)
# test HPC saving
# simulate snapshot on slurm
saved_filepath = trainer.hpc_save(tmpdir, logger)
assert os.path.exists(saved_filepath)
# new logger file to get meta
logger = tutils.get_default_logger(tmpdir, version=version)
trainer = Trainer(
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir),
)
model = EvalModelTemplate(hparams)
# set the epoch start hook so we can predict before the model does the full training
def assert_pred_same():
assert trainer.global_step == real_global_step and trainer.global_step > 0
# predict with loaded model to make sure answers are the same
trainer.model.eval()
new_pred = trainer.model(x)
assert torch.all(torch.eq(pred_before_saving, new_pred)).item() == 1
model.on_epoch_start = assert_pred_same
# by calling fit again, we trigger training, loading weights from the cluster
# and our hook to predict using current model before any more weight updates
trainer.fit(model)
