def saveCsv(sqlDF, csv):
#sqlDF.show(10, truncate=False)
#util.logMessage("count: %d" % sqlDF.count())
# output to csv file
util.logMessage("save to csv: %s" % csv)
csvTmp = csv+"."+time.strftime("%Y%m%d%H%M%S")+".tmp" # temp folder
sqlDF.coalesce(1).write.csv(csvTmp,
header=True,
mode='overwrite',
sep=',',
dateFormat='yyyy-MM-dd',
timestampFormat='yyyy-MM-dd HH:mm:ss')
#timestampFormat='yyyy-MM-dd HH:mm:ss.SSS')
# rename
# check result file exist
outputCsvList = glob.glob(csvTmp+"/*.csv")
if len(outputCsvList) <= 0: # no file
util.logMessage("no file to output: %s" % csv)
return None
# supposed only have 1 because of coalesce(1), but in case of more than one, it will just keep overwriting
for curr_file in sorted(outputCsvList):
os.system("rm -rf '%s'" % csv) # remove prev output
shutil.move(curr_file, csv)
os.system("rm -rf '%s'" % csvTmp) # remove temp output folder
def csvToDF(spark, csvFile, schema=None):
try:
if schema is None:
df = spark.read.csv(csvFile,
ignoreLeadingWhiteSpace=True,
ignoreTrailingWhiteSpace=True,
header=True,
timestampFormat='yyyy-MM-dd HH:mm')
else:
df = spark.read.csv(csvFile,
ignoreLeadingWhiteSpace=True,
ignoreTrailingWhiteSpace=True,
header=True,
timestampFormat='yyyy-MM-dd HH:mm',
schema=schema)
return df
except Exception as e:
util.logMessage("Job: %s: Exception Error: %s!" % (APP_NAME, e))
return None
except:
util.logMessage("Job: %s: Other Unknown Error!" % APP_NAME)
return None
def updateMasterInfo():
global optionJSON
if optionJSON[u'master'] != '': # if master defined, not using zookeeper
optionJSON[u'zkStr'] = ''
util.logMessage("Master default at %s:%d" %
(optionJSON[u'master'], optionJSON[u'masterPort']))
else: # if master not defined, use zookeeper
if optionJSON[u'zkStr'] != '':
util.logMessage(
"Try to determine master using zookeeper string: %s" %
optionJSON[u'zkStr'])
master, masterPort = util.getMesosMaster(optionJSON[u'zkStr'])
else:
util.logMessage(
"Try to determine master using default zookeeper string: %s" %
"zk://mesos_master_01:2181,mesos_master_02:2181,mesos_master_03:2181/mesos"
)
master, masterPort = util.getMesosMaster()
if master == '': # master not found through zookeeper
optionJSON[u'master'] = "mesos_master_01"
util.logMessage(
"Cannot get master from zookeeper; master default at %s:%d" %
(optionJSON[u'master'], optionJSON[u'masterPort']))
else: # master found through zookeeper
optionJSON[u'master'] = master
optionJSON[u'masterPort'] = masterPort
util.logMessage("Master detected at %s:%d" %
(optionJSON[u'master'], optionJSON[u'masterPort']))
def logQuery(kind: str, table: str, sql: str, data: Iterable[Any]) -> None:
if not logQueries:
return
sql = sql.replace('\t', ' ').replace('\n', ' ')
while sql.find(' ') >= 0:
sql = sql.replace(' ', ' ')
data = transformQueryData(data)
util.logMessage(f'{kind}: sql={sql} data={data}')
def _makeRequest(self, apiUrl: str,
params: Optional[Dict[str, str]]) -> Optional[ScrapeMeta]:
import requests
r = None
ts0 = time.time()
# while we have time to retry
while (time.time() - ts0) < self.timeout:
try:
# attempt a request
timePassed = time.time() - ts0
timeLeft = self.timeout - timePassed
r = requests.get(
apiUrl,
headers=self.headers,
params=params,
data=self.extraData,
auth=self.auth,
timeout=max(1, timeLeft),
)
except:
util.logMessage(
'SkitterClient._makeRequest|exception|{}'.format(apiUrl),
'scrape.log')
raise
# if we got rate limited
if r.status_code == 429:
retryAfter = int(r.headers['Retry-After'])
# and there's enough left in our timeout to retry, then retry
if (time.time() + retryAfter - ts0) >= self.timeout:
# otherwise break with the 429 response
break
time.sleep(retryAfter)
else:
# otherwise break with the non-429 response
break
if r is None:
# this _should_ be unreachable
raise Exception(
f'SkitterClient._makeRequest: failed to make request: {apiUrl}'
)
if r.status_code == 404:
return None
if r.status_code != 200:
raise Exception(
'SkitterClient._makeRequest: failed to download url {}: {}'.
format(r.status_code, apiUrl))
ts = int(r.headers['X-Weaver-Created'])
url = str(r.headers['X-Weaver-Url'])
raw = r.content
text = decodeRequest(raw, url)
delaySecs(self.delay)
return buildScrapeMeta(url, ts, text, r.status_code)
def f_map(filetuple):
[fn,bw] = filetuple
try:
xml = XMLParser(fn,'bytes','file',bw,SparkFiles.get('config.ini'))
#util.logMessage("inside map func, after XMLParser(), before xml.ProcessXML()")
return xml.ProcessXML()
except Exception as e:
util.logMessage("err in file: %s" % fn)
return ""
def handleFandom(self, fic: Fic, fandom: str) -> List[Fandom]:
# save raw/messy fandom
fandoms = [Fandom.define(fandom, sourceId=self.ftype)]
# ensure messy is in our map
if fandom not in ffNetFandomMap:
util.logMessage('unknown fandom: {} (from {})'.format(fandom, fic.url))
else:
fandoms.append(Fandom.define(ffNetFandomMap[fandom]))
return fandoms
def deepSoftScrape(self, fic: Fic) -> None:
# try to grab reader pages first to be sure we have them
try:
self.readerSoftScrape(fic)
except:
pass
urls = self.getDeepPageUrls(fic)
util.logMessage('deepSoftScrape|{}|{}'.format(fic.id, len(urls)))
for url in urls:
self.scrapeLike(url, 5)
def scrape(self, url: str) -> ScrapeMeta:
url = canonizeUrl(url)
# TODO staleOnly?
if self.staleOnly:
util.logMessage('staleScrape|{}'.format(url), 'scrape.log')
#r = getMostRecentScrapeWithMeta(url, beforeId = _staleBefore)
#if r is None or 'raw' not in r:
# raise Exception('failed to stale scrape url: {}'.format(url))
#return { 'url': url, 'fetched': ts, 'raw': r['raw'] }
res = self.crawl(url)
saveWebRequest(res['fetched'], res['url'], res['status'], res['raw'])
return res
def getId(cls, name: str, sourceId: int) -> int:
assert (isinstance(sourceId, int))
es = Author.select({'name': name}, f'''
case when exists (
select 1 from author_source s
where s.authorId = authorId and s.sourceId = {sourceId}
) then 1 else 0 end desc''')
if len(es) > 1:
util.logMessage(f'many authors: name={name} sourceId={sourceId}')
if len(es) >= 1:
return es[0].id
if len(es) > 0:
raise Exception('FIXME')
e = Author.new()
e.name = name
e.urlId = util.randomString(8, charset=util.urlIdCharset)
e.insert()
return Author.getId(name, sourceId)
def decodeRequest(data: Optional[bytes], url: str) -> Optional[str]:
global decodeFailureDumpFile
if data is None:
return None
try:
return data.decode('utf-8')
except:
pass
setupCP1252()
# handle Mórrigan and façade in
# http://www.fictionalley.org/authors/irina/galatea05.html
# looks aggressively misencoded
data = data.replace(b'M\xc3\x83\xc2\xb3rr\xc3\x83\xc2\xadgan',
b'M\xf3rrigan')
data = data.replace(b'fa\xc3\x83\xc2\xa7ade', b'fa\xe7ade')
data = data.replace(b'#8211;—–\xb5–\xbb–\xb8',
b'#8211;—–––')
data = data.replace(b'#8211;––\xb9 – —\x83',
b'#8211;–– – —')
data = data.replace(b'–\xb9 – —\x83',
b'#8211;–– – —')
# replace misencoded utf-8 bits (likely from a header or footer) with their
# cp1252 counterparts
for utoc in utf8_to_cp1252:
data = data.replace(utoc[0], utoc[1])
# do some cleanup on the remaining cp1252 to normalize smart quotes and
# delete a few invalid chars that may have leaked through
for ctom in cp1252_munge:
data = data.replace(ctom[0], ctom[1])
try:
return data.decode('cp1252')
except Exception as e:
util.logMessage('error decoding {}: {}\n{}'.format(
url, e, traceback.format_exc()))
with open(decodeFailureDumpFile, 'wb') as f:
f.write(data)
raise
def addPkAndSaveParquet(origDF, writemode, outputDir, numPartition=None):
util.logMessage("adding partition columns...")
'''
# add key col from HL_Area
origDF = origDF.withColumn("HL_Area", lit('unassigned'))
# add key col from HL_Cluster
origDF = origDF.withColumn("HL_Cluster", lit('unassigned'))
# add key col from HL_SectorLayer
origDF = origDF.withColumn("HL_SectorLayer", lit(None).cast(StringType()))
'''
# remove HL_Market column; it will be recovered later
origDF = origDF.drop("HL_Market")
origDF.createOrReplaceTempView('kpi')
# recover from lookup parquet
util.logMessage("start market-cluster-area recovery process...")
# example join sql
#sqlDF = spark.sql("SELECT l.TECH,l.VENDOR,l.MARKET,l.CLUSTER,l.AREA,k.UtranCell from kpi k left join lookup l on k.UtranCell = l.CELL")
# create join dataframe
#df = spark.sql("SELECT k.*, IFNULL(l.MARKET,'unassigned') as HL_Market, IFNULL(l.CLUSTER,'unassigned') AS HL_Cluster, IFNULL(l.AREA,'unassigned') AS HL_Area from kpi k left join lookup l on UPPER(k.OSSName) = UPPER(l.OSS) AND k.UtranCell = l.CELL")
df = spark.sql("SELECT k.*, IFNULL(l.MARKET,'unassigned') as HL_Market, IFNULL(l.CLUSTER,'unassigned') AS HL_Cluster, IFNULL(l.AREA,'unassigned') AS HL_Area, IFNULL(l.SITE,'unassigned') AS HL_Site from kpi k left join lookup l on UPPER(k.OSSName) = UPPER(l.OSS) AND k.UtranCell = l.CELL")
# add key col from HL_MARKET - need to add HL_MARKET because that column will be gone if we go into sub dir
df = df.withColumn("pk_market", df['HL_MARKET'])
# add key col from HL_DATE
df = df.withColumn("pk_date", date_format(df['HL_DATE'], 'yyyy-MM-dd'))
# add key col from PERIOD_START_TIME
df = df.withColumn("pk_hr", date_format(df['PERIOD_START_TIME'], 'HH'))
# show dtypes
#util.logMessage("dtypes: %s" % df.dtypes)
# show schema
#df.printSchema()
#df.show(1,truncate=False)
util.logMessage("start writing parquet file (%s): %s" % (writemode, outputDir))
if numPartition is None:
df.write.parquet(outputDir,
compression='gzip',
mode=writemode,
partitionBy=('pk_date','pk_market','pk_hr'))
else:
# coalesce - num of partition - should match number of executor we run
df.coalesce(numPartition).write.parquet(outputDir,
compression='gzip',
mode=writemode,
partitionBy=('pk_date','pk_market','pk_hr'))
util.logMessage("finish writing parquet file (%s): %s" % (writemode, outputDir))
def extractPostThreadmarkTitle(self, postSoup: Any) -> Optional[str]:
title = ''
# try to grab the title from the threadmark label
try:
labelSpans = postSoup.find_all('span',
{'class': 'threadmarkLabel'})
if len(labelSpans) < 1:
return None
if len(labelSpans) > 1:
util.logMessage(
f'XenForoAdapter: too many threadmark labels: len: {len(labelSpans)}'
)
return str(labelSpans[0].get_text()).strip()
except Exception as e:
util.logMessage('\n'.join([
f'XenForoAdapter.extractPostThreadmarkTitle: exception FIXME: {e}',
traceback.format_exc()
]))
return None
def getDeepAuthorPostUrls(self, fic: Fic) -> List[str]:
urls = self.getDeepPageUrls(fic)
util.logMessage(
f'XenForo.getDeepAuthorPostUrls|deep page urls: {urls}')
# TODO this should probably be more comprehensive...
author = fic.getAuthorName()
altAuthor = author.replace("'", ''')
postUrls: List[str] = []
seenIdStubs = set()
for url in urls:
pageContent = self.scrapeLike(url)
# See getReaderPostUrls for a fully parsed version
for b in pageContent.split('<'):
e = b.find('>')
if e == -1:
continue
s = b[:e]
# TODO FIXME this is bad :(
# looking for li or article (the post container)
if not (b.startswith('li id=')
or b.startswith('article class=')):
continue
# check for 'message' -- simulates checking for message class
if not 'message' in s:
continue
# to check the data-author we simply look for the author and hope
# there aren't collisions
if s.find(author) < 0 and s.find(altAuthor) < 0:
continue
# loop over spaced tokens looking for an unspaced id attribute
for sb in s.split():
if not sb.startswith('id="') or not sb.endswith('"'):
continue
idStub = sb[len('id="'):-1]
if idStub.startswith('js-'):
idStub = idStub[len('js-'):]
postUrl = url + '#' + idStub
if idStub not in seenIdStubs:
postUrls += [postUrl]
seenIdStubs |= {idStub}
util.logMessage(f'XenForo.getDeepAuthorPostUrls|postUrls: {postUrls}')
return postUrls
def insert(self) -> None:
table = type(self).getTableName()
cols = type(self).getNonGeneratedColumns()
sql = 'INSERT INTO {}({}) VALUES({})'.format(
table, ', '.join([c.name for c in cols]), ', '.join(['%s'] * len(cols))
)
data = self.toInsertTuple()
conn = type(self).getConnection()
with conn.cursor() as curs:
try:
logQuery('insert', table, sql, data)
curs.execute(sql, data)
except:
util.logMessage(f'failed to insert: {sql}: {data}', 'lite.log')
raise
global autocommit
if autocommit == True:
conn.commit()
def scrape(url: str,
cookies: 'requests.cookies.RequestsCookieJar' = None,
delay: float = 3,
timeout: int = 15) -> ScrapeMeta:
url = canonizeUrl(url)
headers = {'User-Agent': __userAgent}
ts = int(time.time())
if _staleOnly:
pass # util.logMessage('staleScrape|{}'.format(url), 'scrape.log')
last = getMostRecentScrapeWithMeta(url, beforeId=_staleBefore)
if last is None or 'raw' not in last:
raise Exception('failed to stale scrape url: {}'.format(url))
return {'url': url, 'fetched': ts, 'raw': last['raw']}
import requests
if cookies is None:
import priv
cookies = priv.getDefaultCookies()
r = None
try:
r = requests.get(url,
headers=headers,
cookies=cookies,
timeout=timeout)
except:
util.logMessage('scrape|exception|{}'.format(url), 'scrape.log')
raise
if r.status_code != 200:
saveWebRequest(ts, url, r.status_code, None)
delaySecs(delay)
raise Exception('failed to download url {}: {}'.format(
r.status_code, url))
raw = r.content
text = decodeRequest(raw, url)
saveWebRequest(ts, url, r.status_code, text)
delaySecs(delay)
return {'url': url, 'fetched': ts, 'raw': text}
def jsonToSchema(jsonFile):
schema = None
try:
with open(jsonFile) as json_data:
schemaJson = json.load(json_data)
#print [item for item in schemaJson]
except Exception as e:
util.logMessage("Job: %s: Exception Error: %s!" % (APP_NAME, e))
return None
except:
util.logMessage("Job: %s: Other Unknown Error!" % APP_NAME)
return None
schema = StructType([StructField.fromJson(item) for item in schemaJson])
return schema
def f_map(filetuple):
[fn, bw] = filetuple
try:
xml = nokiaXmlParser(bw, SparkFiles.get('config.ini'), fn)
#util.logMessage("inside map func, after nokiaXmlParser(), before xml.Main()")
data, type, err = xml.Main()
#print fn, type, data
obj = dict()
obj['err'] = err
obj['data'] = data
xmlDict = {
type: obj
} # list of detail [0] and nb summary [1] (if exists)
return xmlDict
except Exception as e:
util.logMessage("err in file: %s\n%s" % (fn, e))
return {}
def loadCellLookup(lookupPQ):
global dfCellLookup
global dictMarketLookup
# read lookup parquet
newlookupPQ = lookupPQ + "/TECH=%s/VENDOR=%s" % ('UMTS','Ericsson')
util.logMessage("reading lookup parquet: %s" % newlookupPQ)
dfLookup = spark.read.parquet(newlookupPQ)
dfCellLookup = dfLookup # save to global
dfLookup.createOrReplaceTempView('lookup')
sqlDF = spark.sql("SELECT DISTINCT MARKET,MARKET_SUFFIX FROM lookup")
arrMarketLookup = sqlDF.collect()
dictMarketLookup = dict()
for row in arrMarketLookup:
dictMarketLookup[row['MARKET']] = row['MARKET_SUFFIX']
util.logMessage("finish reading lookup parquet: %s" % newlookupPQ)
def scrape(url: str,
staleOnly: bool = False,
fallback: bool = False) -> sc.ScrapeMeta:
if sc._staleOnly:
util.logMessage(f'skitter.scrape: HERMES_STALE only {url}')
return sc.scrape(url)
if staleOnly:
util.logMessage(f'skitter.scrape: staleOnly {url}')
for c in reversed(priv.skitterClients):
ce = c.cache(url)
if ce is not None:
return ce
raise Exception(f'skitter.scrape: unable to staleOnly scrape: {url}')
for c in priv.skitterClients:
try:
#util.logMessage(f'skitter.scrape: calling {c.ident}.scrape({url})')
r = c.scrape(url)
return r
except Exception as e:
util.logMessage(f'skitter.scrape: {c.ident}.scrape failed: {e}')
pass
if fallback:
return sc.scrape(url)
raise Exception(f'skitter.scrape: unable to scrape: {url}')
def getId(cls, authorId: int, sourceId: int, name: str, url: str,
localId: str) -> int:
es = AuthorSource.select({'authorId': authorId, 'sourceId': sourceId})
if len(es) > 1:
util.logMessage(
f'many author source: authorId={authorId} sourceId={sourceId}')
if len(es) >= 1:
es[0].name = name
es[0].url = url
es[0].localId = localId
es[0].update()
return es[0].id
if len(es) > 0:
raise Exception('FIXME')
e = AuthorSource.new()
e.authorId = authorId
e.sourceId = sourceId
e.name = name
e.url = url
e.localId = localId
e.insert()
return AuthorSource.getId(authorId, sourceId, name, url, localId)
def getReaderPosts(self,
fic: Fic) -> Tuple[Dict[str, Any], Dict[int, str]]:
from bs4 import BeautifulSoup
urls = self.getReaderUrls(fic)
soups = {}
titles = {}
for url in urls:
pageContent = self.scrapeLike(url)
pageSoup = BeautifulSoup(pageContent, 'html5lib')
posts = pageSoup.find_all(self.postContainer, {'class': 'message'})
if len(posts) < self.postsPerPage and url != urls[-1]:
util.logMessage(
f'XenForoAdapter.getReaderPosts: {url} is not the last page but is incomplete with {len(posts)} posts; attempting to refetch'
)
pageContent = scrape.scrape(url, timeout=30)['raw']
time.sleep(self.defaultDelay)
pageSoup = BeautifulSoup(pageContent, 'html5lib')
posts = pageSoup.find_all(self.postContainer,
{'class': 'message'})
if len(posts) < self.postsPerPage and url != urls[-1]:
raise Exception(
f'XenForoAdapter.getReaderPosts: {url} is not the last page but is incomplete with {len(posts)} posts'
)
for post in posts:
pid = post.get('id')
if pid.startswith('js-'):
pid = pid[len('js-'):]
soups[pid] = post
title = self.extractPostThreadmarkTitle(post)
if title is None:
title = ''
titles[len(soups)] = title
util.logMessage(
f'XenForoAdapter.getReaderPostUrls|{fic.id}|{len(soups)}')
return (soups, titles)
def handleCrossoverFandom(
self, fic: Fic, fandom: str, fIds: List[int], href: str
) -> List[Fandom]:
# save raw/messy fandom
fandoms = [Fandom.define(fandom, sourceId=self.ftype)]
# ensure fandom ids are in our map
# check for missing id maps
missingIds = [fId for fId in fIds if fId not in ffNetFandomIdMap]
if len(missingIds) > 0:
util.logMessage(
'unknown fandom ids: {} from {} in {}'.format(
missingIds, href, fic.url
)
)
return fandoms
# translate to messy
messys = [ffNetFandomIdMap[fId] for fId in fIds]
# check for missing messy
missingMessy = [m for m in messys if m not in ffNetFandomMap]
if len(missingMessy) > 0:
util.logMessage(
'unknown messy fandom: {} from {}'.format(missingMessy, href)
)
return fandoms
# check crossover value
expected = '{}_and_{}_Crossovers'.format(messys[0], messys[1])
if expected != fandom:
util.logMessage(
'crossover got "{}" expected "{}"'.format(fandom, expected)
)
return fandoms
# map messy to clean
cleans = [ffNetFandomMap[m] for m in messys]
for clean in cleans:
if len(clean) > 0:
fandoms.append(Fandom.define(clean))
return fandoms
def parseInfoInto(self, fic: Fic, wwwHtml: str) -> Fic:
from bs4 import BeautifulSoup
soup = BeautifulSoup(wwwHtml, 'html5lib')
fic.fetched = OilTimestamp.now()
fic.languageId = Language.getId("English") # TODO: don't hard code?
if fic.ficStatus is None or fic.ficStatus == FicStatus.broken:
fic.ficStatus = FicStatus.ongoing
# default optional fields
fic.reviewCount = 0
fic.favoriteCount = 0
fic.followCount = 0
fic.ageRating = 'M' # TODO?
# grab title from <title> element
titles = soup.find('head').find_all('title')
if len(titles) != 1:
raise Exception(f'error: cannot find title: {len(titles)}')
ntitle = ''
try:
ntitle = titles[0].get_text()
except:
pass # TODO FIXME
if fic.title is None or len(ntitle.strip()) > 0:
fic.title = ntitle
if len(self.titleSuffix) > 0 and fic.title.endswith(self.titleSuffix):
fic.title = fic.title[:-len(self.titleSuffix)]
fic.title = fic.title.strip()
# determine author
authorPost = self.getRealAuthorPost(fic)
authorPostUsernames = authorPost.find_all('a', {'class': 'username'})
if len(authorPostUsernames) < 1:
raise Exception('error: unable to find author username')
author = authorPostUsernames[0].get_text()
auth_href = authorPostUsernames[0].get('href')
authorUrl = urllib.parse.urljoin(self.baseUrl, auth_href)
if not authorUrl.startswith(self.baseUrl):
raise Exception('error: unknown username href format')
authorId = authorUrl[len(self.baseUrl):]
if not authorId.startswith('members/'):
raise Exception(f'error: unknown author id format: {authorId}')
authorId = authorId.split('/')[1]
self.setAuthor(fic, author, authorUrl, authorId)
if fic.description is None:
# TODO?
fic.description = htmlEscape(fic.title + ' by ' +
fic.getAuthorName())
# try grabbing reader version, fallback to full pages
threadmarksHtml = None
try:
sep = '?' if self.baseUrl.find('?') < 0 else '&'
url = f'{self.baseUrl}threads/{fic.localId}/threadmarks{sep}category_id=1'
threadmarksHtml = self.scrapeLike(url)
self.readerSoftScrape(fic)
except:
# note: we do this before the theardmarks check for old-style fics
# soft scrape all thread pages to ensure we have everything
self.deepSoftScrape(fic)
postSoups: Dict[str, Any] = {}
postUrls: List[str] = []
chapterTitles = {}
try:
# scrape the threadmarks page, assuming there is one
threadmarksSoup = BeautifulSoup(threadmarksHtml, 'html5lib')
# attempt to extract a fic description
threadmarkExtraInfo = threadmarksSoup.find(
'div', {'class': 'threadmarkListingHeader-extraInfo'})
if threadmarkExtraInfo is not None:
bbWrapper = threadmarkExtraInfo.find('div',
{'class': 'bbWrapper'})
if bbWrapper is not None:
desc = bbWrapper.decode_contents()
descView = HtmlView(desc, markdown=False)
fic.description = ''.join(
[f'<p>{l}</p>' for l in descView.text])
# determine chapter count based on threadmarks
threadmarkList = threadmarksSoup.find('div',
{'class': 'threadmarkList'})
threadmarks = None
if threadmarkList is not None:
threadmarks = threadmarkList.find_all(
'li', {'class': 'threadmarkListItem'})
else:
threadmarkList = threadmarksSoup.find(
'div', {'class': 'block-body--threadmarkBody'})
if threadmarkList is None:
raise Exception('error: unable to find threadmark menu')
if threadmarkList.find(class_='fa-ellipsis-h') is not None:
raise Exception('unable to handle elided threamdarks')
threadmarks = threadmarkList.find_all('li')
if len(threadmarks) == 0:
threadmarks = threadmarkList.find_all('tr')
util.logMessage(
f'XenForo|new threadmarks count|{len(threadmarks)}')
for threadmark in threadmarks:
if threadmark.find(
'span', {'class': 'message-newIndicator'}) is not None:
continue
a = threadmark.find('a')
purl = a.get('href')
if purl.startswith('threads/'):
purl = '{}{}'.format(self.baseUrl, purl)
elif purl.startswith('/threads/'):
purl = '{}{}'.format(self.baseUrl, purl[1:])
postUrls += [purl]
chapterTitles[len(postUrls)] = a.getText().strip()
try:
postSoups, _ = self.getReaderPosts(fic)
except Exception as ie:
# FIXME oh boy:
# https://forum.questionablequesting.com/threads/worm-cyoa-things-to-do-in-brockton-bay-when-youre-a-bored-demigod.1247/reader
# Reader page says 36 threadmarks, but actual threadmark list says 33
# First reader page abruptly stops at 27 threadmarks
util.logMessage(
'XenForoAdapter: unable to getReaderPosts: {}\n{}'.format(
ie, traceback.format_exc()))
except Exception as e:
util.logMessage(
'XenForoAdapter: unable to parse threadmarks: {}\n{}'.format(
e, traceback.format_exc()))
try:
postUrls = self.getReaderPostUrls(fic)
postSoups, chapterTitles = self.getReaderPosts(fic)
except Exception as ie:
util.logMessage(
'XenForoAdapter: unable to parse reader posts: {}\n{}'.
format(ie, traceback.format_exc()))
postUrls = self.getDeepAuthorPostUrls(fic)
# if we fallback to here, don't immediately setup postSoups at all;
# they'll be fetched as needed later
fic.chapterCount = len(postUrls)
chapterPosts: List[Optional[str]] = []
chapterUrls: List[str] = []
chapterPostIds: List[str] = []
lastSoupUrl: Optional[str] = None
lastSoup: Optional[Any] = None
for purl in postUrls:
parts = purl.split('#')
burl = parts[0]
postId = authorPost.get('id') if len(parts) < 2 else parts[1]
rawPost = None
# first try getting the post from the reader pages
if postId in postSoups and postSoups[postId] is not None:
rawPost = str(postSoups[postId])
else:
# if needed, fallback to grabbing that page from the entire thread
pageSoup = None
if lastSoupUrl is not None and lastSoupUrl == burl:
pageSoup = lastSoup
else:
pageContent = self.scrapeLike(burl)
pageSoup = BeautifulSoup(pageContent, 'html5lib')
lastSoupUrl = burl
lastSoup = pageSoup
assert (pageSoup is not None)
if postId is not None:
poss = pageSoup.find_all(self.postContainer,
{'id': postId})
if len(poss) != 1:
# XenForo2 often has js- prefixed on the actual id attr
poss = pageSoup.find_all(self.postContainer,
{'id': 'js-' + postId})
if len(poss) != 1:
raise Exception(
f'error: cannot find post for chapter {postId}')
rawPost = str(poss[0])
else:
rawPost = str(
pageSoup.find_all(self.postContainer,
{'class': 'message'})[0])
chapterPosts += [rawPost]
chapterUrls += [burl]
chapterPostIds += [postId]
fic.wordCount = 0
fic.published = None
fic.updated = None
chapterContents: List[str] = []
for rawPost in chapterPosts:
post = BeautifulSoup(rawPost, 'html5lib')
content = post.find_all(
'div', {'class': ['messageContent', 'message-content']})
if len(content) != 1:
raise Exception('error: cannot find content for chapter post')
content = content[0]
lastEditedDivs = content.find_all('div',
{'class': 'message-lastEdit'})
for lastEditedDiv in lastEditedDivs:
br = soup.new_tag("br")
lastEditedDiv.insert_before(br)
chapterContents += [str(content)]
fic.wordCount += len(str(content).split())
uts = self.getPostUpdatedOrPublished(post)
if fic.published is None:
fic.published = OilTimestamp(uts)
fic.updated = OilTimestamp(uts)
if fic.updated is None:
raise Exception(
f'unable to determine updated date: {len(chapterPosts)} {len(postUrls)}'
)
fic.upsert()
for cid in range(fic.chapterCount):
chapter = fic.chapter(cid + 1)
chapter.url = chapterUrls[cid]
chapter.localChapterId = chapterPostIds[cid]
if (cid + 1) in chapterTitles:
chapter.title = chapterTitles[(cid + 1)]
chapter.upsert()
chapter.setHtml(str(chapterContents[cid]))
# TODO: word count, published, updated can only be found once all chapters
# each post is inside an li id="post-{number}" class="message"
# each post has data-author="{author}"
self.updateTitle(fic)
return fic
# "closeToLimitDelay" : 6,
# "exec_core_per_job" : 4,
# "drvr_mem" : "512m",
# "exec_mem" : "2g",
# "logfile" : "", - empty = no log file
# "uiStartPort" : "", - empty = default start port range for random func
# "uiEndPort" : "", - empty = default end port range for random func
# "numFileTypePerTask" : 1,
# "exportType" : "" - empty = export all filetype
# }'
## "":null --> None in python (no coalesce)
## "":false/true --> False/True in python
# argv[6] - (optional) "cluster" or "client" mode
if len(sys.argv) < 6:
util.logMessage("Error: param incorrect.")
sys.exit(2)
# argv[5] - option json - get first to get all options
optionJSON = ""
if len(sys.argv) > 5:
optionJSON = sys.argv[5]
if optionJSON == "":
optionJSON = '{"master":"", "masterPort":5050}'
try:
optionJSON = json.loads(optionJSON)
except Exception as e: # error parsing json
optionJSON = '{"master":"", "masterPort":5050}'
optionJSON = json.loads(optionJSON)
# default val if not exist
def canStartNewJob(statusJSON):
bHaveResource = True
delay_sec = general_retry_delay_sec # general retry delay
global prev_jobname
global check_ctr
# get status
statusJSON = getStatusJSON_mesos()
# get cores used
cores_max, cores_used = getCoresUsed_mesos(statusJSON)
util.logMessage("Current cores used: %d/%d" % (cores_used, cores_max))
# get current job status
numJobs, numWaitingJobs, bFoundLastSubmit = getCurrJobs_mesos(statusJSON)
# get current worker resource status
bHaveWorkersResource = haveWorkersResource_mesos(statusJSON)
# re-calc max num jobs
max_num_job = int(cores_max / core_per_job)
if max_num_job > max_num_job_hardlimit: # check against hard limit
max_num_job = max_num_job_hardlimit
# case 1: cannot get job info
if numJobs == -1 or numWaitingJobs == -1:
bHaveResource = False
check_ctr = 0 # reset retry counter
util.logMessage("cannot get jobs info, retry again in %d sec" %
delay_sec)
'''
# turn off to relax the check so we not neccessary wait for job sumbit finish
# case 2: last submitted job not show up yet
elif prev_jobname != "" and not bFoundLastSubmit:
bHaveResource = False
delay_sec = prev_job_wait_delay_sec # only wait for little before update
util.logMessage("last job submit: %s not completed, retry again in %d sec" % (prev_jobname, delay_sec))
'''
# case 3: allowed cores exceed
elif cores_used > (cores_max - core_per_job):
bHaveResource = False
check_ctr = 0 # reset retry counter
util.logMessage("cores exceeding limit, retry again in %d sec" %
delay_sec)
# case 4: do last n # of check before adding last available job slot
# check_ctr == max_check_ctr means already check n # of times, pass test
elif cores_used == (cores_max - core_per_job):
if check_ctr < max_check_ctr:
check_ctr += 1
bHaveResource = False
delay_sec = core_close_to_limit_delay_sec
util.logMessage("cores close to limit, retry again in %d sec" %
(delay_sec))
else:
check_ctr = 0 # condition met, reset retry counter
# case 5: more than 1 waiting job
elif numWaitingJobs > 1:
bHaveResource = False
check_ctr = 0 # reset retry counter
util.logMessage("number of waiting job = %d, retry again in %d sec" %
(numWaitingJobs, delay_sec))
'''
# cannot check this as now there are other different jobs in the pool
# case 6: max job allowed reached
elif numJobs >= max_num_job:
bHaveResource = False
check_ctr = 0 # reset retry counter
util.logMessage("reached max num of job (%d/%d), retry again in %d sec" % (numJobs, max_num_job, delay_sec))
'''
# case 7: all worker occupied - either no avail core or no avail mem on all the workers
elif bHaveWorkersResource == False:
bHaveResource = False
check_ctr = 0 # reset retry counter
util.logMessage("all workers are occupied, retry again in %d sec" %
delay_sec)
return bHaveResource, delay_sec
def readerSoftScrape(self, fic: Fic) -> None:
urls = self.getReaderUrls(fic)
util.logMessage('readerSoftScrape|fic.id: {}|len(urls): {}'.format(
fic.id, len(urls)))
for url in urls:
self.scrapeLike(url)
def worker(seqfile):
global prev_jobname
seqfile_dir, seqfile_file = os.path.split(seqfile)
if exportMode == 2: # pq only
seqfile_dir, seqfile_file = os.path.split(
seqfile_dir) # parse again for the main folder (2nd lvl)
if optionJSON[u'oss'] == "":
job_oss = ''
else:
job_oss = '_' + optionJSON[u'oss']
if exportMode == 2: # pq only
jobname_expMode = 'a'
elif exportMode == 3: # csv only
jobname_expMode = 'b'
else: # combine
jobname_expMode = 'c'
jobname = "stg3%s_%s%s" % (jobname_expMode, seqfile_file, job_oss)
jobname = jobname.replace(
' ',
'-') # for cluster mode, job name should not contain space - spark bug
util.logMessage("Task %s start..." % jobname)
# get rnadom port for web UI
port = util.getAvailablePortRand(
optionJSON[u'uiStartPort'],
optionJSON[u'uiEndPort']) # get random port
# create master string
if proc_mode == 'cluster': # assume the leading master that zk return is the one to be use for dispatcher
exec_str_master = "mesos://%s:%d" % (optionJSON[u'master'],
optionJSON[u'dispatcherPort'])
else: # client
if optionJSON[u'zkStr'] != '':
exec_str_master = "mesos://%s" % (optionJSON[u'zkStr'])
else:
exec_str_master = "mesos://%s:%d" % (optionJSON[u'master'],
optionJSON[u'masterPort'])
# create spark string
exec_str_spark = "/opt/spark/bin/spark-submit \
--conf spark.ui.port=%d \
--conf spark.network.timeout=900s \
--conf spark.rpc.askTimeout=900s \
--conf spark.executor.heartbeatInterval=900s \
--conf 'spark.driver.extraJavaOptions=-XX:ParallelGCThreads=2' \
--conf 'spark.executor.extraJavaOptions=-XX:ParallelGCThreads=2' \
--master %s \
--deploy-mode %s \
--driver-memory %s \
--executor-memory %s \
--total-executor-cores %d" % (port, exec_str_master, proc_mode,
optionJSON[u'drvr_mem'], optionJSON[u'exec_mem'],
optionJSON[u'exec_core_per_job'])
if proc_mode == 'cluster': # cluster have more options to be set
exec_str_spark += " --py-files \"%s,%s,%s\"" % (
"file://%s/../util.py" % curr_py_dir,
"file://%s/../schema/%s_%s_cell_avail_schema.json" %
(curr_py_dir, optionJSON[u'tech'], optionJSON[u'vendor']),
"file://%s/../sql/%s_%s_sql.json" %
(curr_py_dir, optionJSON[u'tech'], optionJSON[u'vendor']))
# create python string
exec_str_py = "%s/../%s_%s_aggregator.py" % (
curr_py_dir, optionJSON[u'tech'], optionJSON[u'vendor'])
if exportMode == 3: # mode 3 - export csv only
exec_str_app = "%s \
3 \
%s \
%s \
TMO \
\"%s\" \
\"%s\" \
\"%s\" \
'%s'" % (exec_str_py, optionJSON[u'vendorUp'],
optionJSON[u'techUp'], output_parq, output_dir, input_celllookup_parq,
json.dumps(optionJSON))
elif exportMode == 2: # mode 2 - create parquet only
exec_str_app = "%s \
2 \
%s \
%s \
TMO \
\"%s\" \
\"%s/*.txt\" \
\"%s\" \
\"%s\" \
'%s'" % (exec_str_py, optionJSON[u'vendorUp'], optionJSON[u'techUp'],
input_dir, seqfile, input_celllookup_parq, output_parq,
json.dumps(optionJSON))
else: # mode 1 - create parquet and export csv - not support anymore, should not run to here
exec_str_app = "%s \
1 \
%s \
%s \
TMO \
\"%s\" \
\"%s/*.txt\" \
\"%s\" \
\"%s\" \
\"%s\" \
'%s'" % (exec_str_py, optionJSON[u'vendorUp'], optionJSON[u'techUp'],
input_dir, seqfile, input_celllookup_parq, output_parq, output_dir,
json.dumps(optionJSON))
if proc_mode != 'cluster': # client - support multi master (zookeeper)
exec_str_app += " &"
else: # cluster - currently not support multi master (zookeeper)
pass
exec_str = exec_str_spark + " " + exec_str_app
'''
# old samples
# submit new job - xml parser
#exec_str = "spark-submit --master spark://master:7077 --executor-memory 512m --driver-memory 512m --total-executor-cores 2 %s/kpi_parser_eric.py \"%s\" %s \"%s\" &" % (curr_py_dir, jobname, seqfile, output_dir)
if proc_mode != 'cluster': # client - support multi master (zookeeper)
# exec_str = "/opt/spark/bin/spark-submit --master mesos://mesos_master_01:5050 --driver-memory 512m --executor-memory 966m --total-executor-cores 2 %s/kpi_parser_lte_eric.py \"%s\" %s \"tts@mesos_fs_01|%s\" \"client\" &" % (curr_py_dir, jobname, seqfile, output_dir)
exec_str = "/opt/spark/bin/spark-submit --master mesos://zk://mesos_master_01:2181,mesos_master_02:2181,mesos_master_03:2181/mesos --driver-memory 512m --executor-memory 966m --total-executor-cores 2 %s/kpi_parser_lte_eric.py \"%s\" %s \"imnosrf@mesos_fs_01|%s\" \"client\" &" % (curr_py_dir, jobname, seqfile, output_dir)
else: # cluster - currently not support multi master (zookeeper)
# exec_str = "/opt/spark/bin/spark-submit --master mesos://mesos_master_01:7077 --deploy-mode cluster --driver-memory 512m --executor-memory 966m --total-executor-cores 2 --py-files \"file:///home/tts/ttskpiraw/code/lte-eric/util.py,file:///home/tts/ttskpiraw/code/lte-eric/xmlparser_lte_eric.py,file:///home/tts/ttskpiraw/code/lte-eric/config.ini\" %s/kpi_parser_lte_eric.py \"%s\" %s \"tts@mesos_fs_01\|%s\" \"cluster\"" % (curr_py_dir, jobname, seqfile, output_dir)
exec_str = "/opt/spark/bin/spark-submit --master mesos://mesos_master_01:7077 --deploy-mode cluster --driver-memory 512m --executor-memory 966m --total-executor-cores 2 --py-files \"file:///home/imnosrf/ttskpiraw/code/lte-eric/util.py,file:///home/imnosrf/ttskpiraw/code/lte-eric/xmlparser_lte_eric.py,file:///home/imnosrf/ttskpiraw/code/lte-eric/config.ini\" %s/kpi_parser_lte_eric.py \"%s\" %s \"imnosrf@mesos_fs_01\|%s\" \"cluster\"" % (curr_py_dir, jobname, seqfile, output_dir)
'''
util.logMessage("%s" % exec_str)
# update prev jobname
prev_jobname = jobname
os.system(exec_str)
def extractContent(self, fic: Fic, html: str) -> str:
from bs4 import BeautifulSoup
contentId = util.randomString(8)
while html.find(contentId) >= 0:
contentId = util.randomString(len(contentId) + 1)
soup = BeautifulSoup(f'<div id="{contentId}">{html}</div>', 'html5lib')
# SB
for spoiler in soup.find_all('div', {'class': 'bbCodeSpoiler'}):
button = spoiler.find('button')
title = spoiler.find('span',
{'class': 'bbCodeSpoiler-button-title'})
if title is not None and button is not None:
t = soup.new_tag('span')
t.append(title.get_text())
button.insert_after(t)
if button is not None:
button.extract()
for spoiler in soup.find_all('div',
{'class': 'bbCodeSpoiler-content'}):
spoiler.attrs['class'] = 'spoiler'
# QQ
for spoiler in soup.find_all('div',
{'class': 'bbCodeSpoilerContainer'}):
spoiler.attrs.pop('class')
spoiler.name = 'span'
for spoiler in soup.find_all('div', {'class': 'bbCodeSpoilerText'}):
spoiler.attrs['class'] = 'spoiler'
# for the proxy js based img tags, fiddle with their attributes so the
# html cleanup code gets the proxy url out of .data-url and the original
# upstream url from .src (or the proxy url if we don't have a real
# upstream)
for img in soup.find_all('img'):
# proxy img tags have data-src but no actual src
if 'data-src' not in img.attrs:
continue
if 'src' in img.attrs:
continue
src = img.attrs['data-src']
if not src.startswith('http'):
src = self.baseUrl + src
altSrc = None
if 'data-url' in img.attrs:
altSrc = img.attrs['data-url']
img.attrs['data-url'] = src
img.attrs['src'] = src
if altSrc:
img.attrs['src'] = altSrc
# general 'click to expand' nonsense
for div in soup.find_all('div', {'class': 'quoteExpand'}):
if div.get_text().strip() in {
'Click to expand...', 'Click to expand…'
}:
div.extract()
# CloudFlare protected "emails"
for e in soup.find_all('a', {'class': '__cf_email__'}):
if 'data-cfemail' not in e.attrs:
continue
t = e.get_text()
if not t.startswith('[email') or not t.endswith('protected]'):
continue
cfemail = e.attrs['data-cfemail']
email = util.decodeCloudFlareEmail(cfemail)
util.logMessage(f'decoding email|{cfemail}|{email}')
e.name = 'span'
e.attrs.clear()
e.string = email
content = soup.find('div', {'id': contentId})
content = content.contents
if isinstance(content, list):
content = content[0]
return str(content)
def main(input_dir, optionJSON):
'''
# sameple code
# get status
statusJSON = getStatusJSON_mesos()
cores_max, cores_used = getCoresUsed_mesos(statusJSON)
print 'max:%s, used:%s' % (cores_max, cores_used)
print 'have resource: %s' % haveWorkersResource_mesos(statusJSON)
numJobs, numWaitingJobs, bFoundLastSubmit = getCurrJobs_mesos(statusJSON, '1x2c_client')
print 'numJobs: %s; numWaitingJobs: %s; bFoundLastSubmit: %s' % (numJobs, numWaitingJobs, bFoundLastSubmit)
exit(0)
'''
global exportMode
if exportMode != 3: # not only export csv
# go thru all seq file/folder
inputSeqPath = input_dir + "/ttskpiraw_%s_%s_*_TMO*.tgz" % (
optionJSON[u'vendorFULL'], optionJSON[u'techUp'])
inputSeqList = glob.glob(inputSeqPath)
if len(inputSeqList) <= 0: # no file
util.logMessage("No parser output to process: %s" % inputSeqPath)
os.system(
"rm -rf '%s'" % staging_dir_sub
) # remove staging sub folder (since will not be removed by proc)
if exportMode == 2: # if save pq only (no output), and also no input, end process
util.endProcess(lockpath, 0)
else: # if no input, but have output, only do export
exportMode = 3
# export only mode
if exportMode == 3:
util.getInfoFromPQNokia(output_parq)
# from parquet dir get main info: filetypelist->datelist->marketlist->hrlist e.g. {"lte_cell_avail": {"2016-11-21": {"NY": {"00": "path"}}}}
infoPq = util.getInfoFromPQNokia(output_parq)
if infoPq is None or len(infoPq.items()) <= 0: # safeguard
util.logMessage("Error! No data found from parquet file: %s" %
output_parq)
return 0
filetypeExportArr = []
filetypeCtr = 0
filetypeStr = ''
for filetype, filetypeItem in sorted(
infoPq.items()
): # on each file type, accum into file types list based on # filetype per task
if filetypeCtr < int(optionJSON[u'numFileTypePerTask']):
filetypeCtr += 1
else:
filetypeCtr = 1
filetypeExportArr.append(filetypeStr)
if filetypeCtr == 1:
filetypeStr = filetype
else:
filetypeStr += '|' + filetype
# leftover filetype
filetypeExportArr.append(filetypeStr)
for filetypeStr in filetypeExportArr: # on each file types list, spawn new task
# submit one process to work on the whole folder (of multiple txt file)
try:
# get status
statusJSON = getStatusJSON_mesos()
bStartNewJob, delay_sec = canStartNewJob(statusJSON)
while (bStartNewJob == False):
time.sleep(delay_sec)
bStartNewJob, delay_sec = canStartNewJob(
statusJSON) # retest after the sleep
# process file
optionJSON[
u'exportType'] = filetypeStr # set new filetypes (| delimited list)
worker(staging_dir_sub)
# wait some sec before next task
time.sleep(new_job_delay_sec)
except Exception as e:
util.logMessage("Error: failed to export file %s\n%s" %
(staging_dir_sub, e))
except:
util.logMessage("Unexpected error")
return 0
# move seq file into staging_sub first to prevent other proc from touching them
inputSeqStageList = []
for curr_file in sorted(inputSeqList):
util.logMessage("Moving %s to staging dir %s" %
(curr_file, staging_dir_sub))
try:
shutil.move(curr_file, staging_dir_sub)
curr_filedir, curr_filename = os.path.split(curr_file)
inputSeqStageList.append(
os.path.join(staging_dir_sub, curr_filename))
except shutil.Error as e:
util.logMessage("Error: failed to move file %s\n%s" %
(curr_file, e))
except:
util.logMessage("Unexpected error")
# going to each file in the staging area and unzip into one folder
for curr_file in inputSeqStageList:
try:
exec_str = ''
if optionJSON[u'vendor'] == 'eric':
exec_str = "tar -xvzf %s -C %s *%s_%s*TMO.txt" % (
curr_file, staging_dir_sub, optionJSON[u'vendorFULL'],
optionJSON[u'techUp'])
else: # nokia
exec_str = "tar -xvzf %s -C %s *%s_%s*TMO*.txt" % (
curr_file, staging_dir_sub, optionJSON[u'vendorFULL'],
optionJSON[u'techUp'])
util.logMessage('unzipping files: %s' % exec_str)
os.system(exec_str)
except Exception as e:
util.logMessage("Error: failed to process file %s\n%s" %
(curr_file, e))
# try to move it back to input dir for re-processing next round
try:
shutil.move(curr_file, input_dir)
except shutil.Error as e:
util.logMessage("Error: failed to move file %s\n%s" %
(curr_file, e))
except:
util.logMessage("Unexpected error")
except:
util.logMessage("Unexpected error")
# try to move it back to input dir for re-processing next round
try:
shutil.move(curr_file, input_dir)
except shutil.Error as e:
util.logMessage("Error: failed to move file %s\n%s" %
(curr_file, e))
except:
util.logMessage("Unexpected error")
# move files into sub folders by file type
filetypeArr = {}
filetypeSetArr = {}
filetypeDirArr = []
stagingFileList = glob.glob(staging_dir_sub + "/*.txt")
if len(stagingFileList) > 0: # safeguard
for curr_file in stagingFileList:
curr_stg_dir, curr_data_filename = os.path.split(curr_file)
filenameArr = curr_data_filename.split('.')[0].split('_')
filetype = '_'.join(filenameArr[6:])
'''
##### old code - create subfolder by filetype #####
filetypeDir = staging_dir_sub + '/' + filetype
if filetype not in filetypeArr: # create new dir
filetypeArr.append(filetype)
if not os.path.isdir(filetypeDir): # create if not exist
try:
os.mkdir(filetypeDir)
filetypeDirArr.append(filetypeDir)
except:
util.logMessage("Failed to create folder \"%s\"!" % filetypeDir)
util.logMessage("Process terminated.")
util.endProcess(lockpath, 2)
# move file by filetype
try:
shutil.move(curr_file, filetypeDir)
except shutil.Error as e:
util.logMessage("Error: failed to move file %s\n%s" % (curr_file, e))
except:
util.logMessage("Unexpected error")
##### old code - create subfolder by filetype #####
'''
if filetype not in filetypeArr: # create new list
filetypeArr[filetype] = []
filetypeArr[filetype].append(curr_file)
numSet = int(
math.ceil(
len(filetypeArr) / float(optionJSON[u'numFileTypePerTask'])))
setCntr = 1 # init
filetypeCntr = 0 # init
# reorganize set by grouping together multiple filetypes
for filetype, filetypeItem in sorted(filetypeArr.items()):
if filetypeCntr < optionJSON[u'numFileTypePerTask']:
filetypeCntr += 1
else:
filetypeCntr = 1 # reset
setCntr += 1
# create set index and new array if not exist
setIdx = "%d_%d" % (setCntr, numSet)
if setIdx not in filetypeSetArr:
filetypeSetArr[setIdx] = []
# insert filename into set array
for file in filetypeItem:
filetypeSetArr[setIdx].append(file)
# move file to final set dir
for file_set, fileArr in sorted(filetypeSetArr.items()):
filetypeDir = staging_dir_sub + '/' + file_set
if not os.path.isdir(filetypeDir): # create if not exist
try:
os.mkdir(filetypeDir)
filetypeDirArr.append(filetypeDir)
except:
util.logMessage("Failed to create folder \"%s\"!" %
filetypeDir)
util.logMessage("Process terminated.")
util.endProcess(lockpath, 2)
for curr_file in fileArr:
# move file by filetype
try:
shutil.move(curr_file, filetypeDir)
except shutil.Error as e:
util.logMessage("Error: failed to move file %s\n%s" %
(curr_file, e))
except:
util.logMessage("Unexpected error")
# going to each file type folder in the staging area and submit process
for curr_dir in filetypeDirArr:
try:
# get status
statusJSON = getStatusJSON_mesos()
bStartNewJob, delay_sec = canStartNewJob(statusJSON)
while (bStartNewJob == False):
time.sleep(delay_sec)
bStartNewJob, delay_sec = canStartNewJob(
statusJSON) # retest after the sleep
# process file
worker(curr_dir)
# wait some sec before next task
time.sleep(new_job_delay_sec)
except Exception as e:
util.logMessage("Error: failed to process file %s\n%s" %
(curr_file, e))
# WES_TEST: doesn't work like that
# try to move it back to input dir for re-processing next round
try:
shutil.move(curr_file, input_dir)
except shutil.Error as e:
util.logMessage("Error: failed to move file %s\n%s" %
(curr_file, e))
except:
util.logMessage("Unexpected error")
except:
util.logMessage("Unexpected error")
# try to move it back to input dir for re-processing next round
try:
shutil.move(curr_file, input_dir)
except shutil.Error as e:
util.logMessage("Error: failed to move file %s\n%s" %
(curr_file, e))
except:
util.logMessage("Unexpected error")
return 0
