コード例 #1
0
ファイル: init.py プロジェクト: dakoop/vistrails-dataone
    def compute(self, pid):
        cert_file = None
        key_file = None
        cn_url = get_cn_url(self)
        mn_url = get_mn_url(self)

        if self.hasInputFromPort("authentication"):
            auth = self.getInputFromPort("authentication")
            cert_file = auth.cert_file
            key_file = auth.key_file

        self.annotate({"cn_url": cn_url, "mn_url": mn_url})

        mn_client = utils.get_d1_mn_client(mn_url=mn_url, cert_file=cert_file, 
                                           key_file=key_file)
        cn_client = utils.get_d1_cn_client(cn_url=cn_url)
        
        # if it already exists
        if utils.get_sysmeta_by_pid(pid, True, cn_client, mn_client):
            if not self.forceGetInputFromPort("updateIfExists", False):
                raise ModuleError(self, 'Cannot add data: ' \
                                      'identifer "%s" already exists.')
            else:
                self.update_object(pid, mn_client, cn_client)
        self.create_object(pid, mn_client, cn_client)
コード例 #2
0
ファイル: init.py プロジェクト: dakoop/vistrails-dataone
    def compute(self, get_method):
        """compute dumps to object (either science data or metadata)
        to a file object, get_method is the unbound method
        (e.g. MemberNodeClient.get)"""

        pid = self.getInputFromPort("identifier")

        cn_url = get_cn_url(self)
        mn_url = get_mn_url(self)
        cn_client = utils.get_d1_cn_client(cn_url=cn_url)
        mn_client = utils.get_d1_mn_client(mn_url=mn_url)
        self.annotate({'cn_url': cn_url, 'mn_url': used_mn_url})
        output_file = self.interpreter.filePool.create_file()
        # FIXME would be nice to know which member node the data was
        # downloaded from
        res = get_method(pid, mn_client, cn_client, True, output_file.name)
        if res is None:
            raise ModuleError(self, "Object could not be retrieved")

        # do something with identifier.pid and output_file.name
        self.setResult("file", output_file)