def test_get_logger(name):
"""
Make sure get_logger gives the correct logger.
"""
default_logger = logging.getLogger(name)
vm_logger = get_logger(name)
assert vm_logger.logger is default_logger
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from collections import defaultdict, namedtuple
import numpy as np
from vermouth.parser_utils import SectionLineParser
from vermouth.log_helpers import StyleAdapter, get_logger
LOGGER = StyleAdapter(get_logger(__name__))
PersistenceSpecs = namedtuple("persistence",
["model", "lp", "start", "stop", "mol_idxs"])
class BuildDirector(SectionLineParser):
"""
Parser for the build file which dictates additional information
about how to generate the system in the random-walk.
"""
COMMENT_CHAR = ';'
def __init__(self, molecules, topology):
super().__init__()
self.topology = topology