def make_distribution_movie(cellids, rotated, inputDirectory, outputDirectory, outputFileName, zoom=1.0, viewNormal=[0.488281, 0.382966, -0.784167], minThreshold=1e-18, maxThreshold=1e37): '''Makes a distribution movie of some given distribution data Example usage: make_distribution_movie(cellids=[18302, 19432, 19042], rotated=True, inputDirectory=\"/home/hannukse/meteo/stornext/field/vlasiator/2D/AAJ/silo_files/\", outputDirectory=\"/home/hannukse/MOVIES/\", outputFileName=\"testmovie\", zoom=0.8, viewNormal=[0.488281, 0.382966, -0.784167], minThreshold=1e-17, maxThreshold=1.2e37) Note: viewNormal determines the angle of view (straight from visit) ''' if len(viewNormal) != 3: print "ERROR, INVALID VIEWNORMAL LENGTH, SHOULD BE 3" return for cell in sorted(cellids): # OPTIONS ########################################################### cellid = str(cell) #databaseName = "localhost:/home/hannukse/meteo/lustre/tmp/hannuksela/AAM/velgrid.rotated." + cellid + ".*.silo database" if rotated == True: rotateFix = "rotated." else: rotateFix = "" inputFileName = "velgrid." + rotateFix + cellid + ".*.silo" databaseName = "localhost:" + inputDirectory + inputFileName + " database" outputDir = outputDirectory fileName = outputFileName + "_" + cellid + "_" WIDTH = 3000 HEIGHT = 3000 # Threshold values: # TODO: USE VLSV READER TO AUTOMATE THIS minimumThreshold = minThreshold maximumThreshold = maxThreshold ########################################################### vis.OpenDatabase(databaseName, 0) #Load settings visSettings.load_visit_settings() #Make a plot vis.AddPlot("Pseudocolor", "avgs", 1, 1) vis.SetActivePlots(0) vis.AddOperator("Threshold", 1) vis.ThresholdAtts = vis.ThresholdAttributes() vis.ThresholdAtts.outputMeshType = 0 vis.ThresholdAtts.listedVarNames = ("default") vis.ThresholdAtts.zonePortions = (1) vis.ThresholdAtts.lowerBounds = (minimumThreshold) vis.ThresholdAtts.upperBounds = (maximumThreshold) vis.ThresholdAtts.defaultVarName = "avgs" vis.ThresholdAtts.defaultVarIsScalar = 1 vis.SetOperatorOptions(vis.ThresholdAtts, 1) vis.DrawPlots() # Begin spontaneous state vis.View3DAtts = vis.View3DAttributes() vis.View3DAtts.viewNormal = (viewNormal[0], viewNormal[1], viewNormal[2]) vis.View3DAtts.focus = (-634.56, 91.3781, -13.7891) vis.View3DAtts.viewUp = (-0.102795, 0.917551, 0.3841) vis.View3DAtts.viewAngle = 30 vis.View3DAtts.parallelScale = 1.45614e+06 vis.View3DAtts.nearPlane = -2.91228e+06 vis.View3DAtts.farPlane = 2.91228e+06 vis.View3DAtts.imagePan = (0, 0) vis.View3DAtts.imageZoom = zoom vis.View3DAtts.perspective = 1 vis.View3DAtts.eyeAngle = 2 vis.View3DAtts.centerOfRotationSet = 0 vis.View3DAtts.centerOfRotation = (-634.56, 91.3781, -13.7891) vis.View3DAtts.axis3DScaleFlag = 0 vis.View3DAtts.axis3DScales = (1, 1, 1) vis.View3DAtts.shear = (0, 0, 1) vis.SetView3D(vis.View3DAtts) # End spontaneous state vis.ViewCurveAtts = vis.ViewCurveAttributes() vis.ViewCurveAtts.domainCoords = (0, 1) vis.ViewCurveAtts.rangeCoords = (0, 1) vis.ViewCurveAtts.viewportCoords = (0.2, 0.95, 0.15, 0.95) vis.ViewCurveAtts.domainScale = vis.ViewCurveAtts.LINEAR # LINEAR, LOG vis.ViewCurveAtts.rangeScale = vis.ViewCurveAtts.LINEAR # LINEAR, LOG vis.SetViewCurve(vis.ViewCurveAtts) vis.View2DAtts = vis.View2DAttributes() vis.View2DAtts.windowCoords = (0, 1, 0, 1) vis.View2DAtts.viewportCoords = (0.2, 0.95, 0.15, 0.95) vis.View2DAtts.fullFrameActivationMode = vis.View2DAtts.Auto # On, Off, Auto vis.View2DAtts.fullFrameAutoThreshold = 100 vis.View2DAtts.xScale = vis.View2DAtts.LINEAR # LINEAR, LOG vis.View2DAtts.yScale = vis.View2DAtts.LINEAR # LINEAR, LOG vis.View2DAtts.windowValid = 0 vis.SetView2D(vis.View2DAtts) vis.View3DAtts = vis.View3DAttributes() vis.View3DAtts.viewNormal = (viewNormal[0], viewNormal[1], viewNormal[2]) vis.View3DAtts.focus = (-634.56, 91.3781, -13.7891) vis.View3DAtts.viewUp = (-0.102795, 0.917551, 0.3841) vis.View3DAtts.viewAngle = 30 vis.View3DAtts.parallelScale = 1.45614e+06 vis.View3DAtts.nearPlane = -2.91228e+06 vis.View3DAtts.farPlane = 2.91228e+06 vis.View3DAtts.imagePan = (0, 0) vis.View3DAtts.imageZoom = zoom vis.View3DAtts.perspective = 1 vis.View3DAtts.eyeAngle = 2 vis.View3DAtts.centerOfRotationSet = 0 vis.View3DAtts.centerOfRotation = (-634.56, 91.3781, -13.7891) vis.View3DAtts.axis3DScaleFlag = 0 vis.View3DAtts.axis3DScales = (1, 1, 1) vis.View3DAtts.shear = (0, 0, 1) vis.SetView3D(vis.View3DAtts) vis.ViewAxisArrayAtts = vis.ViewAxisArrayAttributes() vis.ViewAxisArrayAtts.domainCoords = (0, 1) vis.ViewAxisArrayAtts.rangeCoords = (0, 1) vis.ViewAxisArrayAtts.viewportCoords = (0.15, 0.9, 0.1, 0.85) vis.SetViewAxisArray(vis.ViewAxisArrayAtts) for i in range(0, vis.GetDatabaseNStates()): vis.SetTimeSliderState(i) vis.SaveWindowAtts = vis.SaveWindowAttributes() vis.SaveWindowAtts.outputToCurrentDirectory = 0 vis.SaveWindowAtts.outputDirectory = outputDir vis.SaveWindowAtts.fileName = fileName vis.SaveWindowAtts.family = 1 vis.SaveWindowAtts.format = vis.SaveWindowAtts.PNG # BMP, CURVE, JPEG, OBJ, PNG, POSTSCRIPT, POVRAY, PPM, RGB, STL, TIFF, ULTRA, VTK, PLY vis.SaveWindowAtts.width = WIDTH vis.SaveWindowAtts.height = HEIGHT vis.SaveWindowAtts.screenCapture = 0 vis.SaveWindowAtts.saveTiled = 0 vis.SaveWindowAtts.quality = 100 vis.SaveWindowAtts.progressive = 0 vis.SaveWindowAtts.binary = 0 vis.SaveWindowAtts.stereo = 0 vis.SaveWindowAtts.compression = vis.SaveWindowAtts.PackBits # None, PackBits, Jpeg, Deflate vis.SaveWindowAtts.forceMerge = 0 vis.SaveWindowAtts.resConstraint = vis.SaveWindowAtts.ScreenProportions # NoConstraint, EqualWidthHeight, ScreenProportions vis.SaveWindowAtts.advancedMultiWindowSave = 0 vis.SetSaveWindowAttributes(vis.SaveWindowAtts) vis.SaveWindow() vis.DeleteActivePlots() vis.CloseDatabase(databaseName) # Make the movie: framerate = 5 subprocess.call([ pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh", outputDir, fileName, framerate ])
def make_moving_frame_of_reference_movie(x_begin, x_end, y_begin, y_end, speed_x, speed_y, variable_name, minThreshold, maxThreshold, input_directory, input_file_name, output_directory, output_file_name, color_table="hot_desaturated", start_frame=-1, end_frame=-1, frame_skip_dt=1.0): ''' Function for making a movie with a moving frame of reference. :param x_begin The starting frame's beginning x-coordinate :param x_end The starting frame's ending x-coordinate :param y_begin The starting frame's beginning x-coordinate :param y_end The starting frame's ending y-coordinate :param speed_x The speed at which the frame moves in the x direction :param speed_y The speed at which the frame moves in the y direction :param variable_name Name of the variable (For ex \"rho\") :param minThreshold Minimum threshold for the variable :param maxThreshold Maximum threshold for the variable :param input_directory The path to the directory where the files are :param input_file_name Name of the files (For ex \"bulk.*.silo\") :param output_directory Directory where to output the movie :param output_file_name Name of the outputted file (For ex \"RHOMOVIE\") :param color_table Name of the color table (\"hot_desaturated\" by default) :param start_frame Starting frame for the movie (if -1, equals 0, -1 by default) :param end_frame Ending frame for the movie (if -1, equals the last frame, -1 by default) :param frame_skip_dt The number of seconds one skip in frame equals (1.0 by default) (Note: This may change depending on the run and should always be checked) ''' # OPTIONS ################################################################# # Input the boundary box for starting coordinates (Starting values) startX = x_begin # The left x-boundary of the box endX = x_end # The right x-boundary of the box startY = y_begin # The bottom y-boundary of the box endY = y_end # The upper y-boundary of the box # Input frame properties startFrame = start_frame # Note: if startFrame is set to -1 the start frame gets set to 0 endFrame = end_frame # Note: if endFrame is set to -1 the endFrame is automatically the number of frames in the database frameInSeconds = frame_skip_dt # Set how many seconds one frame skip is # Input speed in x and y direction speedX = speed_x # Meters per second speedY = speed_y # Meters per second # Input variable variableName = variable_name minVariableValue = minThreshold maxVariableValue = maxThreshold colorTableName = color_table # Input directory and file names outputDir = output_directory # Set the output directory (Where .png s are saved) outputFileName = output_file_name # The file names for the png files. These for ex. will be saved visit0000.png, visit0001.png, . databaseName = "localhost:" + input_directory + input_file_name + " database" # For navigating to the silo files # visitBinDirectory = "/usr/local/visit/bin" #Nevermind this # Note: a slice of the plot in z-axis is taken automatically ################################################################# # Launch visit visitBinDirectory = '/home/htest/visit/bin' vis.LaunchNowin(vdir=visitBinDirectory) dx = speedX * frameInSeconds # Note: This is in meters per frame! dy = speedY * frameInSeconds # Note: This is in meters per frame! #Set up window and annotations vis.OpenDatabase(databaseName, 0) #Load settings visSettings.load_visit_settings() vis.AddPlot("Pseudocolor", variableName, 1, 1) vis.SetActivePlots(0) vis.PseudocolorAtts = vis.PseudocolorAttributes() vis.PseudocolorAtts.legendFlag = 1 vis.PseudocolorAtts.lightingFlag = 1 vis.PseudocolorAtts.minFlag = 1 vis.PseudocolorAtts.maxFlag = 1 vis.PseudocolorAtts.centering = vis.PseudocolorAtts.Natural # Natural, Nodal, Zonal vis.PseudocolorAtts.scaling = vis.PseudocolorAtts.Linear # Linear, Log, Skew vis.PseudocolorAtts.limitsMode = vis.PseudocolorAtts.CurrentPlot # OriginalData, CurrentPlot vis.PseudocolorAtts.min = minVariableValue vis.PseudocolorAtts.max = maxVariableValue vis.PseudocolorAtts.pointSize = 0.05 vis.PseudocolorAtts.pointType = vis.PseudocolorAtts.Point # Box, Axis, Icosahedron, Point, Sphere vis.PseudocolorAtts.skewFactor = 1 vis.PseudocolorAtts.opacity = 1 vis.PseudocolorAtts.colorTableName = color_table vis.PseudocolorAtts.invertColorTable = 0 vis.PseudocolorAtts.smoothingLevel = 0 vis.PseudocolorAtts.pointSizeVarEnabled = 0 vis.PseudocolorAtts.pointSizeVar = "default" vis.PseudocolorAtts.pointSizePixels = 2 vis.PseudocolorAtts.lineStyle = vis.PseudocolorAtts.SOLID # SOLID, DASH, DOT, DOTDASH vis.PseudocolorAtts.lineWidth = 0 vis.PseudocolorAtts.opacityType = vis.PseudocolorAtts.Explicit # Explicit, ColorTable vis.SetPlotOptions(vis.PseudocolorAtts) vis.SetActivePlots(0) vis.AddOperator("Slice", 1) vis.AddOperator("Threshold", 1) vis.ThresholdAtts = vis.ThresholdAttributes() vis.ThresholdAtts.outputMeshType = 0 vis.ThresholdAtts.listedVarNames = ("Boundary_type") vis.ThresholdAtts.zonePortions = (1) vis.ThresholdAtts.lowerBounds = (1) vis.ThresholdAtts.upperBounds = (1) vis.ThresholdAtts.defaultVarName = variableName vis.ThresholdAtts.defaultVarIsScalar = 1 vis.SetOperatorOptions(vis.ThresholdAtts, 1) vis.ThresholdAtts = vis.ThresholdAttributes() vis.ThresholdAtts.outputMeshType = 0 vis.ThresholdAtts.listedVarNames = ("Boundary_type") vis.ThresholdAtts.zonePortions = (1) vis.ThresholdAtts.lowerBounds = (1) vis.ThresholdAtts.upperBounds = (1) vis.ThresholdAtts.defaultVarName = variableName vis.ThresholdAtts.defaultVarIsScalar = 1 vis.SetOperatorOptions(vis.ThresholdAtts, 1) vis.SetActivePlots(0) vis.SliceAtts = vis.SliceAttributes() vis.SliceAtts.originType = vis.SliceAtts.Intercept # Point, Intercept, Percent, Zone, Node vis.SliceAtts.originPoint = (0, 0, 0) vis.SliceAtts.originIntercept = 0 vis.SliceAtts.originPercent = 0 vis.SliceAtts.originZone = 0 vis.SliceAtts.originNode = 0 vis.SliceAtts.normal = (0, 0, 1) vis.SliceAtts.axisType = vis.SliceAtts.ZAxis # XAxis, YAxis, ZAxis, Arbitrary, ThetaPhi vis.SliceAtts.upAxis = (0, 1, 0) vis.SliceAtts.project2d = 1 vis.SliceAtts.interactive = 1 vis.SliceAtts.flip = 0 vis.SliceAtts.originZoneDomain = 0 vis.SliceAtts.originNodeDomain = 0 vis.SliceAtts.meshName = "SpatialGrid" vis.SliceAtts.theta = 0 vis.SliceAtts.phi = 90 vis.SetOperatorOptions(vis.SliceAtts, 1) vis.DrawPlots() if endFrame == -1: endFrame = vis.TimeSliderGetNStates() - 1 if startFrame == -1: startFrame = 0 # Iterate through frames for i in xrange(startFrame, endFrame + 1): vis.SetTimeSliderState(i) frame = i - startFrame vis.View2DAtts = vis.View2DAttributes() vis.View2DAtts.windowCoords = (startX + frame * dx, endX + frame * dx, startY + frame * dy, endY + frame * dy) vis.View2DAtts.viewportCoords = (0.2, 0.95, 0.15, 0.95) vis.View2DAtts.fullFrameActivationMode = vis.View2DAtts.Auto # On, Off, Auto vis.View2DAtts.fullFrameAutoThreshold = 100 vis.View2DAtts.xScale = vis.View2DAtts.LINEAR # LINEAR, LOG vis.View2DAtts.yScale = vis.View2DAtts.LINEAR # LINEAR, LOG vis.View2DAtts.windowValid = 1 vis.SetView2D(vis.View2DAtts) vis.SaveWindowAtts = vis.SaveWindowAttributes() vis.SaveWindowAtts.outputToCurrentDirectory = 0 vis.SaveWindowAtts.outputDirectory = outputDir vis.SaveWindowAtts.fileName = outputFileName vis.SaveWindowAtts.family = 1 vis.SaveWindowAtts.format = vis.SaveWindowAtts.PNG # BMP, CURVE, JPEG, OBJ, PNG, POSTSCRIPT, POVRAY, PPM, RGB, STL, TIFF, ULTRA, VTK, PLY vis.SaveWindowAtts.width = 1024 vis.SaveWindowAtts.height = 1024 vis.SaveWindowAtts.screenCapture = 0 vis.SaveWindowAtts.saveTiled = 0 vis.SaveWindowAtts.quality = 100 vis.SaveWindowAtts.progressive = 0 vis.SaveWindowAtts.binary = 0 vis.SaveWindowAtts.stereo = 0 vis.SaveWindowAtts.compression = vis.SaveWindowAtts.PackBits # None, PackBits, Jpeg, Deflate vis.SaveWindowAtts.forceMerge = 0 vis.SaveWindowAtts.resConstraint = vis.SaveWindowAtts.ScreenProportions # NoConstraint, EqualWidthHeight, ScreenProportions vis.SaveWindowAtts.advancedMultiWindowSave = 0 vis.SetSaveWindowAttributes(vis.SaveWindowAtts) vis.SaveWindow() vis.DeleteActivePlots() vis.CloseDatabase(databaseName) # Make the movie: framerate = 7 subprocess.call([ pythonLibDirectoryPath + pyVisitPath + "moviecompilescript.sh", outputDir, outputFileName, framerate ])