def __init__(self,
poly_src: vtkPolyDataAlgorithm,
parent: Optional['QObject'] = None) -> None:
super().__init__(parent=parent)
self._poly_src = poly_src
self.id = QUuid.createUuid().toString()
self.actor = vtkActor()
mapper = vtkPolyDataMapper()
mapper.SetInputConnection(poly_src.GetOutputPort())
self.actor.SetMapper(mapper)
user_transform = vtkTransform()
user_transform.Identity()
user_transform.PostMultiply()
self.actor.SetUserTransform(user_transform)
self.actor.ComputeMatrix()
transform = vtkTransform()
transform.SetMatrix(self.actor.GetMatrix())
self._coord_converter = vtkTransformPolyDataFilter()
self._coord_converter.SetTransform(transform)
self._coord_converter.AddInputData(poly_src.GetOutput())
self._coord_converter.Update()
self._voxelizer = VoxelSlicer()
self._voxelizer.SetInputConnection(
self._coord_converter.GetOutputPort())
self.results = vtkActor()
self._init_input_id_key()
self._init_output_id_key(self.results)
def testObjectNameNotCopied(self):
foo = vtkActor()
foo.SetObjectName("foo")
bar = vtkActor()
bar.SetObjectName("bar")
foo.ShallowCopy(bar)
self.assertNotEqual(foo.GetObjectName(),bar.GetObjectName())
def main():
colors = vtkNamedColors()
renderer = vtkRenderer()
renWin = vtkRenderWindow()
renWin.AddRenderer(renderer)
iren = vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
sphere = vtkSphereSource()
sphere.SetPhiResolution(100)
sphere.SetThetaResolution(16)
sphere.SetCenter(2, 0, 0)
sphere.SetRadius(69)
sphere.Update()
sphereGeom = sphere.GetOutput()
cone = vtkConeSource()
cone.SetRadius(40)
cone.SetHeight(100)
cone.SetResolution(50)
cone.Update()
coneGeom = cone.GetOutput()
print('Number of points in sphere = ', sphereGeom.GetNumberOfPoints())
print('Number of triangles in sphere = ', sphereGeom.GetNumberOfCells())
print('Number of points in cone = ', coneGeom.GetNumberOfPoints())
print('Number of triangles in cone = ', coneGeom.GetNumberOfCells())
mapperS = vtkDataSetMapper()
mapperS.SetInputData(sphereGeom)
actorS = vtkActor()
actorS.SetMapper(mapperS)
actorS.GetProperty().SetColor(1.0, 0.0, 0.0)
actorS.GetProperty().SetOpacity(0.5)
renderer.AddActor(actorS)
mapperC = vtkDataSetMapper()
mapperC.SetInputData(coneGeom)
actorC = vtkActor()
actorC.SetMapper(mapperC)
actorC.GetProperty().SetOpacity(0.5)
renderer.AddActor(actorC)
renderer.SetBackground(colors.GetColor3d('SlateGray'))
renWin.SetSize(640, 480)
renWin.SetWindowName('Aarya\'s First VTK Program')
renWin.Render()
# Interact with the data.
iren.Start()
def CreateVisualization(geom):
mapper = vtkDataSetMapper()
mapper.SetInputData(geom)
actor = vtkActor()
actor.SetMapper(mapper)
renderer.AddActor(actor)
return actor
def vtkRenderWidgetConeExample():
"""Like it says, just a simple example
"""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# create root window
root = tkinter.Tk()
# create vtkTkRenderWidget
pane = vtkTkRenderWidget(root,width=300,height=300)
ren = vtkRenderer()
pane.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# pack the pane into the tk root
pane.pack()
# start the tk mainloop
root.mainloop()
def slice_obj(self, printer: PrintSetting, printhead: PixelPrinthead,
print_param: GenericPrintParameter) -> None:
# TODO not taking advantage of pipeline check later why
self.actor.ComputeMatrix()
full_trs = vtkTransform()
full_trs.SetMatrix(self.actor.GetMatrix())
self._coord_converter.SetTransform(full_trs)
self._coord_converter.Update()
self._voxelizer.set_settings(printer, printhead, print_param)
self._voxelizer.Update()
surf = vtkMarchingCubes()
surf.SetValue(0, 255)
surf.AddInputData(self._voxelizer.GetOutputDataObject(0))
surf.Update()
polymap = vtkPolyDataMapper()
polymap.SetInputData(surf.GetOutput())
actor = vtkActor()
actor.SetMapper(polymap)
self._init_output_id_key(actor)
self.results.ShallowCopy(actor)
self.render_res_sig.emit(self.id)
def toVTK(
assy: AssemblyProtocol,
renderer: vtkRenderer = vtkRenderer(),
loc: Location = Location(),
color: Tuple[float, float, float, float] = (1.0, 1.0, 1.0, 1.0),
tolerance: float = 1e-3,
) -> vtkRenderer:
loc = loc * assy.loc
trans, rot = loc.toTuple()
if assy.color:
color = assy.color.toTuple()
if assy.shapes:
data = Compound.makeCompound(assy.shapes).toVtkPolyData(tolerance)
mapper = vtkMapper()
mapper.SetInputData(data)
actor = vtkActor()
actor.SetMapper(mapper)
actor.SetPosition(*trans)
actor.SetOrientation(*rot)
actor.GetProperty().SetColor(*color[:3])
actor.GetProperty().SetOpacity(color[3])
renderer.AddActor(actor)
for child in assy.children:
renderer = toVTK(child, renderer, loc, color, tolerance)
return renderer
def wxVTKRenderWindowConeExample():
"""Like it says, just a simple example.
"""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# every wx app needs an app
app = wx.App(False)
# create the widget
frame = wx.Frame(None, -1, "wxVTKRenderWindow", size=(400,400))
widget = wxVTKRenderWindow(frame, -1)
ren = vtkRenderer()
widget.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# show the window
frame.Show()
app.MainLoop()
def QVTKRenderWidgetConeExample():
"""A simple example that uses the QVTKRenderWindowInteractor class."""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# every QT app needs an app
app = QApplication(['QVTKRenderWindowInteractor'])
# create the widget
widget = QVTKRenderWindowInteractor()
widget.Initialize()
widget.Start()
# if you don't want the 'q' key to exit comment this.
widget.AddObserver("ExitEvent", lambda o, e, a=app: a.quit())
ren = vtkRenderer()
widget.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# show the widget
widget.show()
# start event processing
app.exec_()
def main():
ren = vtkRenderer()
for item in glob.iglob(pattern, recursive=True):
reader = vtk.vtkPolyDataReader()
reader.SetFileName(item)
reader.Update()
polydata = reader.GetOutput()
mapper = vtkPolyDataMapper()
mapper.SetInputData(polydata)
actor = vtkActor()
actor.SetMapper(mapper)
ren.AddActor(actor)
renWin = vtkRenderWindow()
renWin.AddRenderer(ren)
renWin.SetWindowName('DDD')
iren = vtkRenderWindowInteractor()
iren.SetRenderWindow(renWin)
renWin.Render()
iren.Start()
def create_cone_actor(vertex: Tuple[float, float, float], angle: float,
h: float):
# TODO maybe it is not good to pass cone object destructed (hard to add new parameters)
"""
:param angle: angle between z-axis and generaxis
"""
sign = lambda x: 0 if not x else int(x / abs(x))
coneSource = vtkConeSource()
coneSource.SetHeight(h)
# coneSource.SetAngle(angle)
coneSource.SetResolution(120)
# coneSource.SetHeight(vertex[2])
import math
coneSource.SetRadius(h * math.tan(math.radians(math.fabs(angle))))
coneSource.SetCenter(vertex[0], vertex[1],
(vertex[2] -
(h / 2) if angle > 0 else vertex[2] + h / 2))
coneSource.SetDirection(0, 0, 1 * sign(angle))
# update parameters
mapper = vtkPolyDataMapper()
mapper.SetInputConnection(coneSource.GetOutputPort())
actor = vtkActor()
actor.SetMapper(mapper)
# create a checkbox for visualization
actor.GetProperty().SetRepresentationToWireframe()
actor.GetProperty().SetColor(get_color(sett().colors.splane))
return actor
def QVTKRenderWidgetConeExample():
"""A simple example that uses the QVTKRenderWindowInteractor class."""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# every QT app needs an app
app = QApplication(['QVTKRenderWindowInteractor'])
# create the widget
widget = QVTKRenderWindowInteractor()
widget.Initialize()
widget.Start()
# if you don't want the 'q' key to exit comment this.
widget.AddObserver("ExitEvent", lambda o, e, a=app: a.quit())
ren = vtkRenderer()
widget.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# show the widget
widget.show()
# start event processing
app.exec_()
def make_sgrid_actor(sgrid, color='Peacock', edges_on=True, grid_only=True):
sgridMapper = vtkDataSetMapper()
sgridMapper.SetInputData(sgrid)
sgridActor = vtkActor()
sgridActor.SetMapper(sgridMapper)
sgridActor.GetProperty().SetColor(vtkNamedColors().GetColor3d(color))
if edges_on and not grid_only: sgridActor.GetProperty().EdgeVisibilityOn()
if grid_only:
sgridActor.GetProperty().SetRepresentationToWireframe()
return sgridActor
def SetInput(self, imagedata):
axes = PLANE_DATA[self.orientation][0] # "x", "y" or "z"
colour = PLANE_DATA[self.orientation][1]
#if self.orientation == SAGITAL:
# spacing = min(imagedata.GetSpacing())
# permute = vtk.vtkImagePermute()
# permute.SetInput(imagedata)
# permute.GetOutput().ReleaseDataFlagOn()
# permute.SetOutputSpacing(spacing, spacing, spacing)
# imagedata = permute.GetOutput()
# Picker for enabling plane motion.
# Allows selection of a cell by shooting a ray into graphics window
picker = vtkCellPicker()
picker.SetTolerance(0.005)
picker.PickFromListOn()
# 3D widget for reslicing image data.
# This 3D widget defines a plane that can be interactively placed in an image volume.
widget = vtkImagePlaneWidget()
widget.SetInput(imagedata)
widget.SetSliceIndex(self.index)
widget.SetPicker(picker)
widget.SetKeyPressActivationValue(axes)
widget.SetInteractor(self.iren)
widget.TextureVisibilityOff()
widget.DisplayTextOff()
widget.RestrictPlaneToVolumeOff()
exec("widget.SetPlaneOrientationTo" + axes.upper() + "Axes()")
widget.AddObserver("InteractionEvent", self.Update)
self.widget = widget
prop = widget.GetPlaneProperty()
prop.SetColor(colour)
# Syncronize coloured outline with texture appropriately
source = vtkPlaneSource()
source.SetOrigin(widget.GetOrigin())
source.SetPoint1(widget.GetPoint1())
source.SetPoint2(widget.GetPoint2())
source.SetNormal(widget.GetNormal())
self.source = source
mapper = vtkPolyDataMapper()
mapper.SetInput(source.GetOutput())
actor = vtkActor()
actor.SetMapper(mapper)
actor.SetTexture(widget.GetTexture())
actor.VisibilityOff()
self.actor = actor
self.render.AddActor(actor)
def main():
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# load implementations for rendering and interaction factory classes
import vtkmodules.vtkRenderingOpenGL2
import vtkmodules.vtkInteractionStyle
# The main window
window = gtk.GtkWindow(gtk.WINDOW_TOPLEVEL)
window.set_title("A GtkVTKRenderWindow Demo!")
window.connect("destroy", gtk.mainquit)
window.connect("delete_event", gtk.mainquit)
window.set_border_width(10)
# A VBox into which widgets are packed.
vbox = gtk.GtkVBox(spacing=3)
window.add(vbox)
vbox.show()
# The GtkVTKRenderWindow
gvtk = GtkVTKRenderWindowInteractor()
#gvtk.SetDesiredUpdateRate(1000)
gvtk.set_usize(400, 400)
vbox.pack_start(gvtk)
gvtk.show()
gvtk.Initialize()
gvtk.Start()
# prevents 'q' from exiting the app.
gvtk.AddObserver("ExitEvent", lambda o, e, x=None: x)
# The VTK stuff.
cone = vtkConeSource()
cone.SetResolution(80)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
#coneActor = vtkLODActor()
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
coneActor.GetProperty().SetColor(0.5, 0.5, 1.0)
ren = vtkRenderer()
gvtk.GetRenderWindow().AddRenderer(ren)
ren.AddActor(coneActor)
# A simple quit button
quit = gtk.GtkButton("Quit!")
quit.connect("clicked", gtk.mainquit)
vbox.pack_start(quit)
quit.show()
# show the main window and start event processing.
window.show()
gtk.mainloop()
def wxVTKRenderWindowInteractorConeExample():
"""Like it says, just a simple example
"""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# load implementations for rendering and interaction factory classes
import vtkmodules.vtkRenderingOpenGL2
import vtkmodules.vtkInteractionStyle
# every wx app needs an app
app = wx.App(False)
# create the top-level frame, sizer and wxVTKRWI
frame = wx.Frame(None, -1, "wxVTKRenderWindowInteractor", size=(400, 400))
widget = wxVTKRenderWindowInteractor(frame, -1)
sizer = wx.BoxSizer(wx.VERTICAL)
sizer.Add(widget, 1, wx.EXPAND)
frame.SetSizer(sizer)
frame.Layout()
# It would be more correct (API-wise) to call widget.Initialize() and
# widget.Start() here, but Initialize() calls RenderWindow.Render().
# That Render() call will get through before we can setup the
# RenderWindow() to render via the wxWidgets-created context; this
# causes flashing on some platforms and downright breaks things on
# other platforms. Instead, we call widget.Enable(). This means
# that the RWI::Initialized ivar is not set, but in THIS SPECIFIC CASE,
# that doesn't matter.
widget.Enable(1)
widget.AddObserver("ExitEvent", lambda o, e, f=frame: f.Close())
ren = vtkRenderer()
widget.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# show the window
frame.Show()
app.MainLoop()
def stick(molecule, colormode='discrete', bond_thickness=0.1):
"""Create an actor for stick molecular representation.
Parameters
----------
molecule : Molecule
The molecule to be rendered.
colormode : string, optional
Set the colormode for coloring the bonds. Two valid color modes:
* 'discrete': Bonds are colored using CPK coloring convention.
* 'single': All bonds are colored with the same color (dark grey)
RGB tuple used for coloring the bonds when 'single' colormode is
selected: (50, 50, 50)
Default: 'discrete'
bond_thickness : float, optional
Used to manipulate the thickness of bonds (i.e. thickness of tubes
which are used to render bonds).
Default: 0.1 (Optimal range: 0.1 - 0.5).
Returns
-------
molecule_actor : vtkActor
Actor created to render the stick representation of the molecule to be
visualized.
"""
if molecule.total_num_bonds == 0:
raise ValueError('No bonding data available for the molecule! Stick '
'model cannot be made!')
colormode = colormode.lower()
mst_mapper = dcovtk.vtkOpenGLMoleculeMapper()
mst_mapper.SetInputData(molecule)
mst_mapper.SetRenderAtoms(True)
mst_mapper.SetRenderBonds(True)
mst_mapper.SetBondRadius(bond_thickness)
mst_mapper.SetAtomicRadiusTypeToUnitRadius()
mst_mapper.SetAtomicRadiusScaleFactor(bond_thickness)
if colormode == 'discrete':
mst_mapper.SetAtomColorMode(1)
mst_mapper.SetBondColorMode(1)
elif colormode == 'single':
mst_mapper.SetAtomColorMode(0)
mst_mapper.SetBondColorMode(0)
else:
mst_mapper.SetAtomColorMode(1)
warnings.warn("Incorrect colormode specified! Using discrete.")
molecule_actor = rcvtk.vtkActor()
molecule_actor.SetMapper(mst_mapper)
return molecule_actor
class SampleTest(vtkTest):
from vtkmodules.vtkRenderingCore import vtkActor
obj = vtkActor()
def testParse(self):
"Test if class is parseable"
self._testParse(self.obj)
def testGetSet(self):
"Testing Get/Set methods"
self._testGetSet(self.obj)
def testBoolean(self):
"Testing Boolean methods"
self._testBoolean(self.obj)
def sphere_cpk(molecule, colormode='discrete'):
"""Create an actor for sphere molecular representation. It's also referred
to as CPK model and space-filling model.
Parameters
----------
molecule : Molecule
The molecule to be rendered.
colormode : string, optional
Set the colormode for coloring the atoms. Two valid color modes:
* 'discrete': Atoms are colored using CPK coloring convention.
* 'single': All atoms are colored with same color (grey). RGB tuple
used for coloring the atoms when 'single' colormode is selected:
(150, 150, 150).
Default: 'discrete'
Returns
-------
molecule_actor : vtkActor
Actor created to render the space filling representation of the
molecule to be visualized.
References
----------
Corey R.B.; Pauling L. Molecular Models of Amino Acids,
Peptides, and Proteins
`Review of Scientific Instruments 1953, 24 (8), 621-627.
<https://doi.org/10.1063/1.1770803>`_
"""
colormode = colormode.lower()
msp_mapper = dcovtk.vtkOpenGLMoleculeMapper()
msp_mapper.SetInputData(molecule)
msp_mapper.SetRenderAtoms(True)
msp_mapper.SetRenderBonds(False)
msp_mapper.SetAtomicRadiusTypeToVDWRadius()
msp_mapper.SetAtomicRadiusScaleFactor(1)
if colormode == 'discrete':
msp_mapper.SetAtomColorMode(1)
elif colormode == 'single':
msp_mapper.SetAtomColorMode(0)
else:
msp_mapper.SetAtomColorMode(1)
warnings.warn("Incorrect colormode specified! Using discrete.")
# To-Do manipulate shading properties to make it look aesthetic
molecule_actor = rcvtk.vtkActor()
molecule_actor.SetMapper(msp_mapper)
return molecule_actor
def main():
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# The main window
window = gtk.Window(gtk.WINDOW_TOPLEVEL)
window.set_title("A GtkVTKRenderWindow Demo!")
window.connect("destroy", gtk.mainquit)
window.connect("delete_event", gtk.mainquit)
window.set_border_width(10)
# A VBox into which widgets are packed.
vbox = gtk.VBox(spacing=3)
window.add(vbox)
vbox.show()
# The GtkVTKRenderWindow
gvtk = GtkGLExtVTKRenderWindowInteractor()
#gvtk.SetDesiredUpdateRate(1000)
gvtk.set_size_request(400, 400)
vbox.pack_start(gvtk)
gvtk.show()
gvtk.Initialize()
gvtk.Start()
# prevents 'q' from exiting the app.
gvtk.AddObserver("ExitEvent", lambda o,e,x=None: x)
# The VTK stuff.
cone = vtkConeSource()
cone.SetResolution(80)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
#coneActor = vtkLODActor()
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
coneActor.GetProperty().SetColor(0.5, 0.5, 1.0)
ren = vtkRenderer()
gvtk.GetRenderWindow().AddRenderer(ren)
ren.AddActor(coneActor)
# A simple quit button
quit = gtk.Button("Quit!")
quit.connect("clicked", gtk.mainquit)
vbox.pack_start(quit)
quit.show()
# show the main window and start event processing.
window.show()
gtk.mainloop()
def QVTKRenderWidgetConeExample():
"""A simple example that uses the QVTKRenderWindowInteractor class."""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# load implementations for rendering and interaction factory classes
import vtkmodules.vtkRenderingOpenGL2
import vtkmodules.vtkInteractionStyle
# every QT app needs an app
app = QApplication(['QVTKRenderWindowInteractor'])
window = QMainWindow()
# create the widget
widget = QVTKRenderWindowInteractor(window)
window.setCentralWidget(widget)
# if you don't want the 'q' key to exit comment this.
widget.AddObserver("ExitEvent", lambda o, e, a=app: a.quit())
ren = vtkRenderer()
widget.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# show the widget
window.show()
widget.Initialize()
widget.Start()
# start event processing
# Source: https://doc.qt.io/qtforpython/porting_from2.html
# 'exec_' is deprecated and will be removed in the future.
# Use 'exec' instead.
try:
app.exec()
except AttributeError:
app.exec_()
def OnLoadSurfaceDict(self, surface_dict):
for key in surface_dict:
surface = surface_dict[key]
# Map polygonal data (vtkPolyData) to graphics primitives.
normals = vtkPolyDataNormals()
normals.SetInputData(surface.polydata)
normals.SetFeatureAngle(80)
normals.AutoOrientNormalsOn()
# normals.GetOutput().ReleaseDataFlagOn()
# Improve performance
stripper = vtkStripper()
stripper.SetInputConnection(normals.GetOutputPort())
stripper.PassThroughCellIdsOn()
stripper.PassThroughPointIdsOn()
mapper = vtkPolyDataMapper()
mapper.SetInputConnection(stripper.GetOutputPort())
mapper.ScalarVisibilityOff()
# mapper.ImmediateModeRenderingOn() # improve performance
# Represent an object (geometry & properties) in the rendered scene
actor = vtkActor()
actor.GetProperty().SetBackfaceCulling(1)
actor.SetMapper(mapper)
# Set actor colour and transparency
actor.GetProperty().SetColor(surface.colour[:3])
actor.GetProperty().SetOpacity(1 - surface.transparency)
self.actors_dict[surface.index] = actor
# Send actor by pubsub to viewer's render
Publisher.sendMessage('Load surface actor into viewer',
actor=actor)
Publisher.sendMessage('Update status text in GUI',
label=_("Ready"))
# The following lines have to be here, otherwise all volumes disappear
Publisher.sendMessage('Update surface info in GUI',
surface=surface)
if not surface.is_shown:
self.ShowActor(key, False)
def main():
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# load implementations for rendering and interaction factory classes
import vtkmodules.vtkRenderingOpenGL2
import vtkmodules.vtkInteractionStyle
# The main window
window = gtk.Window()
window.set_title("A GtkGLExtVTKRenderWindow Demo!")
window.connect("destroy", gtk.mainquit)
window.connect("delete_event", gtk.mainquit)
window.set_border_width(10)
vtkgtk = GtkGLExtVTKRenderWindow()
vtkgtk.show()
vbox = gtk.VBox(spacing=3)
vbox.show()
vbox.pack_start(vtkgtk)
button = gtk.Button('My Button')
button.show()
vbox.pack_start(button)
window.add(vbox)
window.set_size_request(400, 400)
# The VTK stuff.
cone = vtkConeSource()
cone.SetResolution(80)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
#coneActor = vtkLODActor()
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
coneActor.GetProperty().SetColor(0.5, 0.5, 1.0)
ren = vtkRenderer()
vtkgtk.GetRenderWindow().AddRenderer(ren)
ren.AddActor(coneActor)
# show the main window and start event processing.
window.show()
gtk.mainloop()
def vtkRenderWindowInteractorConeExample():
"""Like it says, just a simple example
"""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# load implementations for rendering and interaction factory classes
import vtkmodules.vtkRenderingOpenGL2
import vtkmodules.vtkInteractionStyle
# create root window
root = tkinter.Tk()
# create vtkTkRenderWidget
pane = vtkTkRenderWindowInteractor(root, width=300, height=300)
pane.Initialize()
def quit(obj=root):
obj.quit()
pane.AddObserver("ExitEvent", lambda o, e, q=quit: q())
ren = vtkRenderer()
pane.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# pack the pane into the tk root
pane.pack(fill='both', expand=1)
pane.Start()
# start the tk mainloop
root.mainloop()
def createLine(point1: tuple, point2: tuple, color: str = "Black") -> vtkActor:
"""
:param point1:
:param point2:
:param color:
:return:
"""
line = vtkLineSource()
line.SetPoint1(*point1)
line.SetPoint2(*point2)
mapper = vtkPolyDataMapper()
mapper.SetInputConnection(line.GetOutputPort())
actor = vtkActor()
actor.SetMapper(mapper)
actor.GetProperty().SetColor(vtkNamedColors().GetColor3d(color))
return actor
def main():
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# The main window
window = gtk.Window()
window.set_title("A GtkGLExtVTKRenderWindow Demo!")
window.connect("destroy", gtk.mainquit)
window.connect("delete_event", gtk.mainquit)
window.set_border_width(10)
vtkgtk = GtkGLExtVTKRenderWindow()
vtkgtk.show()
vbox = gtk.VBox(spacing=3)
vbox.show()
vbox.pack_start(vtkgtk)
button = gtk.Button('My Button')
button.show()
vbox.pack_start(button)
window.add(vbox)
window.set_size_request(400, 400)
# The VTK stuff.
cone = vtkConeSource()
cone.SetResolution(80)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
#coneActor = vtkLODActor()
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
coneActor.GetProperty().SetColor(0.5, 0.5, 1.0)
ren = vtkRenderer()
vtkgtk.GetRenderWindow().AddRenderer(ren)
ren.AddActor(coneActor)
# show the main window and start event processing.
window.show()
gtk.mainloop()
def vtkRenderWindowInteractorConeExample():
"""Like it says, just a simple example
https://gitlab.kitware.com/vtk/vtk/-/blob/master/Wrapping/Python/vtkmodules/tk/vtkTkRenderWindowInteractor.py
"""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
from vtkmodules.tk.vtkTkRenderWindowInteractor import vtkTkRenderWindowInteractor
# create root window
root = tkinter.Tk()
# create vtkTkRenderWidget
pane = vtkTkRenderWindowInteractor(root, width=300, height=300)
pane.Initialize()
def quit(obj=root):
obj.quit()
pane.AddObserver("ExitEvent", lambda o,e,q=quit: q())
ren = vtkRenderer()
pane.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# pack the pane into the tk root
pane.pack(fill='both', expand=1)
pane.Start()
# start the tk mainloop
root.mainloop()
def Create(self):
self.plane_widget = plane_widget = vtkImagePlaneWidget()
plane_widget.SetInputData(self.img)
plane_widget.SetPlaneOrientationToXAxes()
#plane_widget.SetResliceInterpolateToLinear()
plane_widget.TextureVisibilityOff()
#Set left mouse button to move and rotate plane
plane_widget.SetLeftButtonAction(1)
#SetColor margin to green
margin_property = plane_widget.GetMarginProperty()
margin_property.SetColor(0, 0.8, 0)
#Disable cross
cursor_property = plane_widget.GetCursorProperty()
cursor_property.SetOpacity(0)
self.plane_source = plane_source = vtkPlaneSource()
plane_source.SetOrigin(plane_widget.GetOrigin())
plane_source.SetPoint1(plane_widget.GetPoint1())
plane_source.SetPoint2(plane_widget.GetPoint2())
plane_source.SetNormal(plane_widget.GetNormal())
plane_mapper = self.plane_mapper = vtkPolyDataMapper()
plane_mapper.SetInputData(plane_source.GetOutput())
self.plane_actor = plane_actor = vtkActor()
plane_actor.SetMapper(plane_mapper)
plane_actor.GetProperty().BackfaceCullingOn()
plane_actor.GetProperty().SetOpacity(0)
plane_widget.AddObserver("InteractionEvent", self.Update)
Publisher.sendMessage('AppendActor', actor=self.plane_actor)
Publisher.sendMessage('Set Widget Interactor',
widget=self.plane_widget)
plane_actor.SetVisibility(1)
plane_widget.On()
self.plane = plane = vtkPlane()
plane.SetNormal(self.plane_source.GetNormal())
plane.SetOrigin(self.plane_source.GetOrigin())
self.volume_mapper.AddClippingPlane(plane)
#Storage First Position
self.origin = plane_widget.GetOrigin()
self.p1 = plane_widget.GetPoint1()
self.p2 = plane_widget.GetPoint2()
self.normal = plane_widget.GetNormal()
def vtkRenderWindowInteractorConeExample():
"""Like it says, just a simple example
"""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
# create root window
root = tkinter.Tk()
# create vtkTkRenderWidget
pane = vtkTkRenderWindowInteractor(root, width=300, height=300)
pane.Initialize()
def quit(obj=root):
obj.quit()
pane.AddObserver("ExitEvent", lambda o,e,q=quit: q())
ren = vtkRenderer()
pane.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# pack the pane into the tk root
pane.pack(fill='both', expand=1)
pane.Start()
# start the tk mainloop
root.mainloop()
def _do_surface_creation(self, mask, mask_sFormMatrix=None):
if mask_sFormMatrix is None:
mask_sFormMatrix = vtkMatrix4x4()
value = np.mean(mask.GetScalarRange())
# Use the mask to create isosurface
mc = vtkContourFilter()
mc.SetInputData(mask)
mc.SetValue(0, value)
mc.ComputeNormalsOn()
mc.Update()
# Mask isosurface
refSurface = mc.GetOutput()
# Create a uniformly meshed surface
tmpPeel = downsample(refSurface)
# Standard space coordinates
# Apply coordinate transform to the meshed mask
mask_ijk2xyz = vtkTransform()
mask_ijk2xyz.SetMatrix(mask_sFormMatrix)
mask_ijk2xyz_filter = vtkTransformPolyDataFilter()
mask_ijk2xyz_filter.SetInputData(tmpPeel)
mask_ijk2xyz_filter.SetTransform(mask_ijk2xyz)
mask_ijk2xyz_filter.Update()
# Smooth the mesh
tmpPeel = smooth(mask_ijk2xyz_filter.GetOutput())
# Configure calculation of normals
tmpPeel = fixMesh(tmpPeel)
# Remove duplicate points etc
# tmpPeel = cleanMesh(tmpPeel)
# Generate triangles
tmpPeel = upsample(tmpPeel)
tmpPeel = smooth(tmpPeel)
tmpPeel = fixMesh(tmpPeel)
tmpPeel = cleanMesh(tmpPeel)
refImageSpace2_xyz_transform = vtkTransform()
refImageSpace2_xyz_transform.SetMatrix(vtk_utils.numpy_to_vtkMatrix4x4(np.linalg.inv(self.affine)))
self.refImageSpace2_xyz = vtkTransformPolyDataFilter()
self.refImageSpace2_xyz.SetTransform(refImageSpace2_xyz_transform)
xyz2_refImageSpace_transform = vtkTransform()
xyz2_refImageSpace_transform.SetMatrix(vtk_utils.numpy_to_vtkMatrix4x4(self.affine))
self.xyz2_refImageSpace = vtkTransformPolyDataFilter()
self.xyz2_refImageSpace.SetTransform(xyz2_refImageSpace_transform)
currentPeel = tmpPeel
self.currentPeelNo = 0
currentPeel= self.MapImageOnCurrentPeel(currentPeel)
newPeel = vtkPolyData()
newPeel.DeepCopy(currentPeel)
newPeel.DeepCopy(currentPeel)
self.peel_normals = vtkFloatArray()
self.peel_centers = vtkFloatArray()
self.peel.append(newPeel)
self.currentPeelActor = vtkActor()
if not np.all(np.equal(self.affine, np.eye(4))):
affine_vtk = self.CreateTransformedVTKAffine()
self.currentPeelActor.SetUserMatrix(affine_vtk)
self.GetCurrentPeelActor(currentPeel)
self.peelActors.append(self.currentPeelActor)
# locator will later find the triangle on the peel surface where the coil's normal intersect
self.locator = vtkCellLocator()
self.PeelDown(currentPeel)
def main():
colors = vtkNamedColors()
operation = "intersection"
reader = vtkUnstructuredGridReader()
reader.SetFileName(ATRIA_VTK_FILE)
geo_filter = vtkGeometryFilter()
geo_filter.SetInputConnection(reader.GetOutputPort())
geo_filter.Update()
poly1 = geo_filter.GetOutput()
tri1 = vtkTriangleFilter()
tri1.SetInputData(poly1)
clean1 = vtkCleanPolyData()
clean1.SetInputConnection(tri1.GetOutputPort())
clean1.Update()
input1 = clean1.GetOutput()
sphereSource1 = vtkSphereSource()
sphereSource1.SetCenter(20.43808060942321, 18.333007878470767,
34.5753857481471)
sphereSource1.SetRadius(0.5)
# sphereSource1.SetPhiResolution(21)
# sphereSource1.SetThetaResolution(21)
sphereSource1.Update()
input2 = sphereSource1.GetOutput()
input1Mapper = vtkPolyDataMapper()
input1Mapper.SetInputData(input1)
input1Mapper.ScalarVisibilityOff()
input1Actor = vtkActor()
input1Actor.SetMapper(input1Mapper)
input1Actor.GetProperty().SetDiffuseColor(colors.GetColor3d("Tomato"))
input1Actor.GetProperty().SetSpecular(0.6)
input1Actor.GetProperty().SetSpecularPower(20)
# input1Actor.SetPosition(input1.GetBounds()[1] - input1.GetBounds()[0], 0, 0)
input2Mapper = vtkPolyDataMapper()
input2Mapper.SetInputData(input2)
input2Mapper.ScalarVisibilityOff()
input2Actor = vtkActor()
input2Actor.SetMapper(input2Mapper)
input2Actor.GetProperty().SetDiffuseColor(colors.GetColor3d("Mint"))
input2Actor.GetProperty().SetSpecular(0.6)
input2Actor.GetProperty().SetSpecularPower(20)
# input2Actor.SetPosition(-(input1.GetBounds()[1] - input1.GetBounds()[0]), 0, 0)
booleanOperation = vtkBooleanOperationPolyDataFilter()
if operation.lower() == "union":
booleanOperation.SetOperationToUnion()
elif operation.lower() == "intersection":
booleanOperation.SetOperationToIntersection()
elif operation.lower() == "difference":
booleanOperation.SetOperationToDifference()
else:
print("Unknown operation:", operation)
return
booleanOperation.SetInputData(0, input1)
booleanOperation.SetInputData(1, input2)
booleanOperationMapper = vtkPolyDataMapper()
booleanOperationMapper.SetInputConnection(booleanOperation.GetOutputPort())
booleanOperationMapper.ScalarVisibilityOff()
booleanOperationActor = vtkActor()
booleanOperationActor.SetMapper(booleanOperationMapper)
booleanOperationActor.GetProperty().SetDiffuseColor(
colors.GetColor3d("Banana"))
booleanOperationActor.GetProperty().SetSpecular(0.6)
booleanOperationActor.GetProperty().SetSpecularPower(20)
renderer = vtkRenderer()
renderer.AddViewProp(input1Actor)
renderer.AddViewProp(input2Actor)
renderer.AddViewProp(booleanOperationActor)
renderer.SetBackground(colors.GetColor3d("Silver"))
renderWindow = vtkRenderWindow()
renderWindow.AddRenderer(renderer)
renderWindow.SetSize(640, 480)
renderWindow.SetWindowName("BooleanOperationPolyDataFilter")
viewUp = [0.0, 0.0, 1.0]
position = [0.0, -1.0, 0.0]
PositionCamera(renderer, viewUp, position)
renderer.GetActiveCamera().Dolly(1.4)
renderer.ResetCameraClippingRange()
renWinInteractor = vtkRenderWindowInteractor()
renWinInteractor.SetRenderWindow(renderWindow)
renderWindow.Render()
renWinInteractor.Start()
def _actor(self, mapper=None):
actor = vtkActor()
if mapper is not None:
actor.SetMapper(mapper)
_hide_testing_actor(actor)
return actor
def wxVTKRenderWindowInteractorConeExample():
"""Like it says, just a simple example
https://discourse.vtk.org/t/interactor-start-blocking-execution/1095/2
https://gitlab.kitware.com/vtk/vtk/-/blob/master/Wrapping/Python/vtkmodules/wx/wxVTKRenderWindowInteractor.py
ipython --gui=wx
#gui wx
run learn_vtk.py
"""
from vtkmodules.vtkFiltersSources import vtkConeSource
from vtkmodules.vtkRenderingCore import vtkActor, vtkPolyDataMapper, vtkRenderer
from vtkmodules.wx.wxVTKRenderWindowInteractor import wxVTKRenderWindowInteractor
import wx
colors = vtk.vtkNamedColors()
# every wx app needs an app
app = wx.App(False)
# create the top-level frame, sizer and wxVTKRWI
frame = wx.Frame(None, -1, "wxVTKRenderWindowInteractor", size=(400,400))
widget = wxVTKRenderWindowInteractor(frame, -1)
sizer = wx.BoxSizer(wx.VERTICAL)
sizer.Add(widget, 1, wx.EXPAND)
frame.SetSizer(sizer)
frame.Layout()
# It would be more correct (API-wise) to call widget.Initialize() and
# widget.Start() here, but Initialize() calls RenderWindow.Render().
# That Render() call will get through before we can setup the
# RenderWindow() to render via the wxWidgets-created context; this
# causes flashing on some platforms and downright breaks things on
# other platforms. Instead, we call widget.Enable(). This means
# that the RWI::Initialized ivar is not set, but in THIS SPECIFIC CASE,
# that doesn't matter.
widget.Enable(1)
widget.AddObserver("ExitEvent", lambda o,e,f=frame: f.Close())
ren = vtkRenderer()
renwin = widget.GetRenderWindow()
widget.GetRenderWindow().AddRenderer(ren)
cone = vtkConeSource()
cone.SetResolution(8)
coneMapper = vtkPolyDataMapper()
coneMapper.SetInputConnection(cone.GetOutputPort())
coneActor = vtkActor()
coneActor.SetMapper(coneMapper)
ren.AddActor(coneActor)
# show the window
frame.Show()
# It works!
# wx.CallLater(1000*5, lambda : ren.SetBackground(colors.GetColor3d('Blue')))
# wx.CallLater(1000*8, lambda : renwin.Render())
# colors = vtk.vtkNamedColors()
# wx.CallAfter(lambda : ren.SetBackground(colors.GetColor3d('Blue')))
# wx.CallAfter(lambda : renwin.Render())
def fn():
ren.SetBackground(colors.GetColor3d('Blue'))
renwin.Render()
wx.CallLater(1000*3, fn)
#app.MainLoop() # comment out to interact in ipython
return app, ren, renwin
interp = vtkAdaptiveTemporalInterpolator()
interp.SetInputConnection(reader.GetOutputPort())
geom = vtkCompositeDataGeometryFilter()
geom.SetInputConnection(interp.GetOutputPort())
# map them
mapper = vtkCompositePolyDataMapper()
mapper.SetInputConnection(geom.GetOutputPort())
mapper.SetScalarModeToUsePointFieldData()
mapper.SelectColorArray('point_poly')
mapper.SetScalarRange(1.0, 6.0)
mapper.InterpolateScalarsBeforeMappingOn()
mapper.SetScalarVisibility(1)
actor = vtkActor()
actor.SetMapper(mapper)
renderer = vtkRenderer()
renWin = vtkRenderWindow()
iren = vtkRenderWindowInteractor()
renderer.AddActor(actor)
renderer.SetBackground(0.0, 0.0, 0.0)
renWin.AddRenderer(renderer)
renWin.SetSize(300, 300)
iren.SetRenderWindow(renWin)
# ask for some specific data points
info = geom.GetOutputInformation(0)