def to_match_representation(match, full=False):
output = {
"accession": match.protein_id,
"coordinates": match.coordinates,
"length": match.protein.length,
"source_database": match.protein.source_database,
"name": match.protein.name,
}
if full:
output["protein"] = ProteinSerializer.to_metadata_representation(match.protein)
return output
def to_chain_representation(instance, full=False):
chain = {
"chain": instance.chain,
"accession": instance.protein.accession,
"source_database": instance.protein.source_database,
"length": instance.length,
"organism": instance.organism,
"coordinates": instance.coordinates,
}
if full:
chain["protein"] = ProteinSerializer.to_metadata_representation(instance.protein)
return chain