def reloadSubjects(self):
"""Reload OpenClinica study subects enrolled into selected study/site in working thread
"""
# Clear study subjects
del self._studySubjects[:]
self._studySubjects = []
self._selectedStudySubject = None
self._studySubjects = None
self._subjectsREST = None
# Setup loading UI
self.window().statusBar.showMessage("Loading list of study subjects...")
self.window().enableIndefiniteProgess()
self.tabWidget.setEnabled(False)
# Load subject for whole study or only site if it is multicentre study
if self._selectedStudy and self._selectedStudy.isMulticentre:
self._threadPool.append(
WorkerThread(
self.ocWebServices.listAllStudySubjectsByStudySite,
[self._selectedStudy, self._selectedStudySite, self._studyMetadata]
)
)
else:
self._threadPool.append(
WorkerThread(
self.ocWebServices.listAllStudySubjectsByStudy,
[self._selectedStudy, self._studyMetadata]
)
)
# Connect slots
self.connect(
self._threadPool[len(self._threadPool) - 1],
QtCore.SIGNAL("finished(QVariant)"),
self.loadSubjectsFinished
)
# Start thread
self._threadPool[len(self._threadPool) - 1].start()
# TODO: it would be much faster if I request REST subject only for the selected one
# TODO: however we have to migrate to a new version of OC first
# Need to get OIDs of subjects
self._threadPool.append(
WorkerThread(
self.svcHttp.getStudyCasebookSubjects, [ConfigDetails().ocHost, self.getStudyOid()]
)
)
# Connect slots
self.connect(
self._threadPool[len(self._threadPool) - 1],
QtCore.SIGNAL("finished(QVariant)"),
self.loadSubjectsRESTFinished
)
# Start thread
self._threadPool[len(self._threadPool) - 1].start()
def reloadEvents(self):
"""Reload OpenClinica events scheduled for selected study subject
"""
# Setup loading UI
self.window().statusBar.showMessage("Loading subject scheduled events...")
self.window().enableIndefiniteProgess()
self.tabWidget.setEnabled(False)
# Define a job
# Need to get EventRepeatKeys
self._threadPool.append(
WorkerThread(
self.svcHttp.getStudyCasebookEvents,
[ConfigDetails().ocHost, self.getStudyOid(), self._selectedStudySubject.oid]
)
)
# Connect slots
self.connect(
self._threadPool[len(self._threadPool) - 1],
QtCore.SIGNAL("finished(QVariant)"),
self.loadEventsFinished
)
# Start thread
self._threadPool[len(self._threadPool) - 1].start()
def btnDownloadClicked(self):
"""Upload button pressed (DICOM upload workflow started)
"""
QtGui.qApp.processEvents(QtCore.QEventLoop.AllEvents, 1000)
#self.progressBar.setRange(0, 100)
#self.progressBar.setValue(0)
self._downloadDir = self.selectFolderDialog()
if self._downloadDir is not None:
# Disable upload button for now but better is to disable whole UI
self.btnDownload.setEnabled(False)
# Start download DICOM data
# Create thread
self._threadPool.append(
WorkerThread(self._svcDicom.downloadDicomData, [
self._downloadDir,
self.getStudyIdentifier(), self._svcHttp
]))
# Connect finish event
self._threadPool[len(self._threadPool) - 1].finished.connect(
self.DicomDownloadFinishedMessage)
# Connect message eventscd
self.connect(self._threadPool[len(self._threadPool) - 1],
QtCore.SIGNAL("message(QString)"), self.Message)
self.connect(self._threadPool[len(self._threadPool) - 1],
QtCore.SIGNAL("log(QString)"), self.LogMessage)
# Progress
self.connect(self._threadPool[len(self._threadPool) - 1],
QtCore.SIGNAL("taskUpdated"), self.handleTaskUpdated)
# Start thread
self._threadPool[len(self._threadPool) - 1].start()
def reloadStudyMetadata(self):
"""Reload study metadata for selected study
"""
# Setup loading UI
self.window().statusBar.showMessage("Loading study metadata...")
self.window().enableIndefiniteProgess()
self.tabWidget.setEnabled(False)
# Create data loading thread
self._threadPool.append(
WorkerThread(self.ocWebServices.getStudyMetadata,
self._selectedStudy))
# Connect slots
self.connect(self._threadPool[len(self._threadPool) - 1],
QtCore.SIGNAL("finished(QVariant)"),
self.loadStudyMetadataFinished)
# Start thread
self._threadPool[len(self._threadPool) - 1].start()
def reloadStudies(self):
"""Reload OpenClinica studies (in working thread)
"""
# Setup loading UI
self.window().statusBar.showMessage(
"Loading list of clinical studies...")
self.window().enableIndefiniteProgess()
self.tabWidget.setEnabled(False)
# Create data loading thread
self._threadPool.append(WorkerThread(
self.ocWebServices.listAllStudies))
# Connect slots
self.connect(self._threadPool[len(self._threadPool) - 1],
QtCore.SIGNAL("finished(QVariant)"),
self.loadStudiesFinished)
# Start thread
self._threadPool[len(self._threadPool) - 1].start()