class TestWrite(unittest.TestCase):
def setUp(self):
self.username = '******'
self.password = '******'
self.json_handler_OBJ = JSON_methods()
self.json_handler_OBJ.session = requests.Session()
self.json_handler_OBJ.session.auth = (self.username, self.password)
self.write_OBJ = Write(None)
def tearDown(self):
pass
def test_set_json_handler_Method(self):
json_handler = None
self.write_OBJ = Write(json_handler)
self.write_OBJ.set_json_handler(self.json_handler_OBJ)
self.assertIsInstance(self.write_OBJ.json_handler, JSON_methods)
def test_data_file_hash_Method(self):
return_value = self.write_OBJ.data_file_hash('title', 'desc', 'view',
'1', 'licence', 'url',
'filename')
self.assertIsInstance(return_value, dict)
def test_assay_hash_Method(self):
return_value = self.write_OBJ.assay_hash('title', 'desc', 'view', '1',
'assay_class', 'assay_type',
'assay_tech_type')
self.assertIsInstance(return_value, dict)
def test_study_hash_Method(self):
return_value = self.write_OBJ.study_hash('title', 'desc', 'view', '1')
self.assertIsInstance(return_value, dict)
def test_investigation_hash_Method(self):
return_value = self.write_OBJ.investigation_hash(
'title', 'desc', 'view', '1')
self.assertIsInstance(return_value, dict)
def test_post_tab_creation_Method(self):
self.assertEqual(self.write_OBJ.create_tab, None)
self.write_OBJ.post_tab_creation('desc', 'Create')
self.assertNotEqual(self.write_OBJ.create_tab, None)
self.write_OBJ.post_tab_creation('desc', 'Update')
self.assertNotEqual(self.write_OBJ.create_tab, None)
def test_doc_write_Method(self):
self.assertEqual(self.write_OBJ.doc_write_tab, None)
self.write_OBJ.doc_write('Create')
self.assertNotEqual(self.write_OBJ.doc_write_tab, None)
self.write_OBJ.doc_write('Update')
self.assertNotEqual(self.write_OBJ.doc_write_tab, None)
def test_compulsory_fields_Method(self):
return_value = None
self.assertEqual(return_value, None)
return_value = self.write_OBJ.compulsory_fields()
self.assertNotEqual(return_value, None)
def test_data_file_fields_Method(self):
return_value = None
self.assertEqual(return_value, None)
return_value = self.write_OBJ.data_file_fields()
self.assertNotEqual(return_value, None)
def test_optional_fields_Method(self):
return_value = None
self.assertEqual(return_value, None)
return_value = self.write_OBJ.data_file_fields()
self.assertNotEqual(return_value, None)
def test_assay_fields_Method(self):
return_value = None
self.assertEqual(return_value, None)
return_value = self.write_OBJ.assay_fields()
self.assertNotEqual(return_value, None)
def test_iterate_over_json_list_Method(self):
return_value = None
self.assertEqual(return_value, None)
data = {}
return_value = self.write_OBJ.iterate_over_json_list(data)
self.assertNotEqual(return_value, None)
class SEEK():
'''
Container of all classes
All functions are called from this class
FUNCTIONS :
query : select ID and type for searching
post : post a json
search : search a file based on query
query : set login details
change_url : FOR DEMO PURPOSE ONLY
Change url to sandbox website
'''
def __init__(self):
self.json_handler = JSON_methods()
self.SEEK_query = None
self.SEEK_search = None
self.SEEK_write = None
def query(self):
self.SEEK_query = Query(self.json_handler)
self.SEEK_query.query()
def post(self):
if self.SEEK_write == None:
self.SEEK_write = Write(self.json_handler)
self.SEEK_write.post_choice()
def search(self):
self.SEEK_search = Search(self.json_handler)
valid = True
list_of_names = self.SEEK_query.get_list_of_user_names()
list_of_ids = self.SEEK_query.get_list_of_user_ids()
topic = self.SEEK_query.get_topic()
if topic == 'Document query' or topic == 'Person query':
settings_dict = self.SEEK_query.get_setting_options_dict()
settings_dict = dict(settings_dict)
id = self.SEEK_query.get_id_to_search()
if id == '':
print('ID is needed')
valid = False
type = self.SEEK_query.get_type_to_search()
if valid == True:
self.SEEK_search.search_parameters(topic, id, type,
settings_dict,
list_of_names, list_of_ids)
self.SEEK_search.search()
else:
print('Select Document/Person query tab to search')
def change_url(self):
print('1: https://www.fairdomhub.org')
print('2: https://sandbox3.fairdomhub.org')
choice = input("Please choose url 1 or 2:\n")
print('You entered {0}'.format(choice))
self.json_handler.change_url(choice)
if self.SEEK_query != None:
self.SEEK_query.set_json_handler(self.json_handler)
if self.SEEK_search != None:
self.SEEK_search.set_json_handler(self.json_handler)
def auth(self):
self.json_handler.auth_request()
# self.SEEK_query.set_json_handler(self.json_handler)
if self.SEEK_query != None:
self.SEEK_query.set_json_handler(self.json_handler)
if self.SEEK_search != None:
self.SEEK_search.set_json_handler(self.json_handler)
if self.SEEK_write != None:
self.SEEK_write.set_json_handler(self.json_handler)