#!/usr/bin/python
# -*- coding: utf-8 -*-
import MoNeT_MGDrivE as monet
import os
import glob
import math
import matplotlib.pyplot as plt
import matplotlib.patches as mpatches
import numpy as np
import kernels_aux as aux
plt.rcParams.update({'figure.max_open_warning': 0})
pathRoot = "/Volumes/marshallShare/YK_Alt_Kernels/output/"
colors = ["#090446", "#f20060", "#7fff3a", "#ff28d4", "#6898ff", "#c6d8ff"]
cmaps = monet.generateAlphaColorMapFromColorArray(colors)
styleS = {
"width": 0,
"alpha": .85,
"dpi": 2 * 512,
"legend": False,
"aspect": 250,
"dpi": 512,
"colors": colors,
"format": "png",
"xRange": [0, 1500],
"yRange": [0, 1] # 2500]
}
##############################################################################
# Baseline
##############################################################################
# #############################################################################
# Terminal aesthetics
# #############################################################################
CSV_PAD = 5 * 365
PAD = '' + 75 * '*' + ''
PADL = '' + 75 * '-' + ''
(CRED, CYEL, CBMA, CBRE, CBBL, CWHT,
CEND) = ('\033[91m', '\u001b[33m', '\u001b[35;1m', '\u001b[31;1m',
'\u001b[34;1m', '\u001b[37m', '\033[0m')
# #############################################################################
# Colors
# #############################################################################
# Health ----------------------------------------------------------------------
colorsH = ['#0000ff20', '#ff000020', '#ffffff00'] # '#9f00cc']
cmapsH = monet.generateAlphaColorMapFromColorArray(colorsH)
STYLE_HLT = {
"width": .2,
"alpha": .1,
"dpi": 500,
"legend": True,
"aspect": .5,
"xRange": [0, 1825],
"yRange": [0, 10100], # [0, 525066.0],
"colors": colorsH
}
STYLE_HLT['aspect'] = monet.scaleAspect(.3, STYLE_HLT)
# Ecology ---------------------------------------------------------------------
colorsE = [
GENOTYPES = [
'WWWW', 'WWWH', 'WWWR', 'WWWB', 'WWHH', 'WWHR', 'WWHB', 'WWRR',
'WWRB', 'WWBB', 'WCWW', 'WCWH', 'WCWR', 'WCWB', 'WCHH', 'WCHR',
'WCHB', 'WCRR', 'WCRB', 'WCBB', 'CCWW', 'CCWH', 'CCWR', 'CCWB',
'CCHH', 'CCHR', 'CCHB', 'CCRR', 'CCRB', 'CCBB'
]
COLORS = [
"#09044620", "#f2006020", "#c6d8ff20",
"#7692ff20", "#29339b20", "#7fff3a20"
]
COLORS_MP = [
"#090446FF", "#f20060FF", "#c6d8ffFF",
"#7692ffFF", "#29339bFF", "#7fff3aFF"
]
CMAPS = monet.generateAlphaColorMapFromColorArray(COLORS_MP)
###############################################################################
# Terminal
###############################################################################
(PADA, PADB, PADC) = ('*' * 79, '-' * 79, ' ' * 50)
(CRED, CYEL, CBMA, CBRE, CBBL, CWHT, CEND, CBLU, CGRE) = (
'\033[91m', '\u001b[33m', '\u001b[35;1m',
'\u001b[31;1m', '\u001b[34;1m', '\u001b[37m',
'\033[0m', '\033[34m', '\033[92m'
)
def printExperimentHead(PATH_ROOT, PATH_IMG, PATH_DATA, time, name):
print(PADA)
print(
CWHT + 'Split Drive: ' + name
import MoNeT_MGDrivE as monet
###############################################################################
# Colors
###############################################################################
# Health ----------------------------------------------------------------------
COLHN = [
"#FF006E5A", "#8338EC5A", "#0C48875A"
]
COLHO = [i[:-2]+'FF' for i in COLHN]
COLHM = monet.generateAlphaColorMapFromColorArray(COLHO)
# Ecology ---------------------------------------------------------------------
COLEN = [
"#ff004d5A", "#C7FF035A", "#66FF005A",
"#8338EC5A", "#0904465A", "#7fff3a5A"
]
COLEO = [i[:-2]+'FF' for i in COLEN]
COLEM = monet.generateAlphaColorMapFromColorArray(COLEO)
###############################################################################
# Gene-Dictionaries
###############################################################################
# Linked Drive Replacement ----------------------------------------------------
# 0: WW, 1: WH, 2: WR, 3: WB, 4: HH,
# 5: HR, 6: HB, 7: RR, 8: RB, 9: BB
drive_LDR = {
'id': 'Replacement', 'folder': 'LDR', 'loc': 1,
'HLT': {
'gDict': monet.generateAggregationDictionary(
["H", "Other", "Total"],
[
[1, 4, 5, 6],
import tGD_gene_tGD as gtgd import tGD_gene_split as gsd import tGD_gene_linked as gld import tGD_gene_clvr as clv import MoNeT_MGDrivE as monet ############################################################################### # Colors ############################################################################### # Ecology --------------------------------------------------------------------- COLEN = ["#2614ed", "#FF006E", "#45d40c", "#8338EC", "#1888e3", "#BC1097"] COLEN = [c + '1A' for c in COLEN] COLEO = [i[:-2] + 'FF' for i in COLEN] COLEM = monet.generateAlphaColorMapFromColorArray(COLEO) # Health ---------------------------------------------------------------------- COLHN = ["#FF006E", "#8338EC", "#0C4887"] COLHN = [c + '1A' for c in COLHN] COLHO = [i[:-2] + 'FF' for i in COLHN] COLHM = monet.generateAlphaColorMapFromColorArray(COLHO) # Trash ---------------------------------------------------------------------- COLTN = ["#0eeb10", "#8337ec", "#0C4887"] COLTN = [c + '1A' for c in COLTN] COLTO = [i[:-2] + 'FF' for i in COLTN] COLTM = monet.generateAlphaColorMapFromColorArray(COLTO) # Wild ---------------------------------------------------------------------- COLWN = ["#8337ec", "#00a2fe", "#0C4887"] COLWN = [c + '1A' for c in COLWN] COLWO = [i[:-2] + 'FF' for i in COLWN] COLWM = monet.generateAlphaColorMapFromColorArray(COLWO) # CLS ---------------------------------------------------------------------- COLCN = ["#0eeb10", "#FF006E", "#ffffff"]
