def setUp(self):
signatures = [("GAC", "GAC"), ("AAA", "TTT"), ("CAA", "TTG")]
self.coder = Signature.SignatureCoder(signatures, 9)
self.test_seqs = [("GACAAAGACTTT", [1.0, 1.0, 0.0]),
("CAAAGACGACTTTAAATTT", [0.5, 1.0, 0.0]),
("AAATTTAAAGACTTTGAC", [1.0 / 3.0, 1.0, 0.0]),
("GACGAC", [1.0, 0.0, 0.0]),
("GACAAAAAAAAAGAC", [1.0, 0.0, 0.0]),
("GACAAAAAAAAAAGAC", [0.0, 0.0, 0.0])]
def test_inconsistent_signature_sizes(self):
with self.assertRaises(ValueError):
Signature.SignatureCoder([('GAC', 'GAC'), ('AA', 'TTT')], 1)
