def _case_two_setup(self):
append_to_user_nl_files(
caseroot=self._get_caseroot(),
component="clm",
contents=
"glacier_region_behavior = 'single_at_atm_topo', 'virtual', 'virtual', 'virtual'"
)
def test_append_multiple_files(self):
# Simulates a multi-instance test
component = 'foo'
orig_contents1 = 'bar = 42'
orig_contents2 = 'bar = 17'
contents_to_append = 'baz = 101'
# Setup
filename1 = self.write_user_nl_file(component,
orig_contents1,
suffix='_0001')
filename2 = self.write_user_nl_file(component,
orig_contents2,
suffix='_0002')
# Exercise
user_nl_utils.append_to_user_nl_files(caseroot=self._caseroot,
component=component,
contents=contents_to_append)
# Verify
expected_contents1 = orig_contents1 + '\n' + contents_to_append + '\n'
expected_contents2 = orig_contents2 + '\n' + contents_to_append + '\n'
self.assertFileContentsEqual(expected_contents1,
os.path.join(self._caseroot, filename1))
self.assertFileContentsEqual(expected_contents2,
os.path.join(self._caseroot, filename2))
def _case_two_setup(self):
append_to_user_nl_files(
caseroot=self._get_caseroot(),
component=self.comp,
contents=
"use_c13=.true.,use_c14=.true.,use_c13_timeseries=.true.,use_c14_bombspike=.true."
)
def _case_one_setup(self):
append_to_user_nl_files(
caseroot=self._get_caseroot(),
component="clm",
contents=
"soil_layerstruct_userdefined_nlevsoi = 4,soil_layerstruct_userdefined = 0.1d0,0.3d0,0.6d0,1.0d0,1.0d0"
)
def test_append_multiple_files(self):
# Simulates a multi-instance test
component = "foo"
orig_contents1 = "bar = 42"
orig_contents2 = "bar = 17"
contents_to_append = "baz = 101"
# Setup
filename1 = self.write_user_nl_file(component,
orig_contents1,
suffix="_0001")
filename2 = self.write_user_nl_file(component,
orig_contents2,
suffix="_0002")
# Exercise
user_nl_utils.append_to_user_nl_files(caseroot=self._caseroot,
component=component,
contents=contents_to_append)
# Verify
expected_contents1 = orig_contents1 + "\n" + contents_to_append + "\n"
expected_contents2 = orig_contents2 + "\n" + contents_to_append + "\n"
self.assertFileContentsEqual(expected_contents1,
os.path.join(self._caseroot, filename1))
self.assertFileContentsEqual(expected_contents2,
os.path.join(self._caseroot, filename2))
def _common_setup(self):
nl_contents_common = '''
! DIMCS test changes
'''
append_to_user_nl_files(caseroot=self._case.get_value("CASEROOT"),
component=self.comp,
contents=nl_contents_common)
def _case_two_setup(self):
append_to_user_nl_files(caseroot = self._get_caseroot(),
component = "clm",
contents = "use_c13=.true.,use_c14=.true.,use_c13_timeseries=.true.,use_c14_bombspike=.true.," + \
"hist_fexcl1='C13_AR','C13_GPP','C13_HR','C13_NBP','C13_SOILC_vr','C13_TOTECOSYSC'," + \
"'C13_TOTLITC','C13_TOTSOMC','C13_TOTVEGC','C14_AR','C14_GPP','C14_HR','C14_NBP'," + \
"'C14_SOILC_vr','C14_TOTECOSYSC','C14_TOTLITC','C14_TOTSOMC','C14_TOTVEGC'")
def _case_one_setup(self):
# Turn off history output for the given ice sheet in the multi-ice sheet case:
# otherwise, the comparison between the cases will fail due to a history file
# being present in one case but not the other.
append_to_user_nl_files(caseroot = self._get_caseroot(),
component = "cism_{}".format(self._remove_icesheet_grid_name),
# setting history_frequency to 10000 years should be effectively the same as 'never'
contents = "history_frequency = 10000")
def _case_one_setup(self):
# BUG(wjs, 2019-07-30, ESCOMP/ctsm#495) We currently can't turn on actual water
# isotopes in a multi-timestep test, so we're setting
# enable_water_tracer_consistency_checks rather than enable_water_isotopes;
# eventually, though, we should change this to the latter. (See
# <https://github.com/ESCOMP/ctsm/issues/495#issuecomment-516619853>.)
append_to_user_nl_files(caseroot = self._get_caseroot(),
component = "clm",
contents = "enable_water_tracer_consistency_checks=.true.")
def _case_two_setup(self):
# This is needed in the nearly-standard case to prevent grain from being used to
# replenish crop seed deficits, thus making grain act like the reproductive
# structure pools. (It wouldn't hurt to do this in case one as well, but it
# shouldn't be needed there, since we shouldn't have any grain there anyway.)
append_to_user_nl_files(
caseroot=self._get_caseroot(),
component="clm",
contents="for_testing_no_crop_seed_replenishment=.true.")
def _case_one_setup(self):
# We don't really need a second grain pool for this test, but we might as well do
# this to further exercise the looping over different reproductive components.
append_to_user_nl_files(
caseroot=self._get_caseroot(),
component="clm",
contents="for_testing_use_second_grain_pool=.true.")
append_to_user_nl_files(
caseroot=self._get_caseroot(),
component="clm",
contents="for_testing_use_repr_structure_pool=.true.")
def test_append(self):
# Define some variables
component = 'foo'
# deliberately exclude new line from file contents, to make sure that's
# handled correctly
orig_contents = 'bar = 42'
contents_to_append = 'baz = 101'
# Setup
filename = self.write_user_nl_file(component, orig_contents)
# Exercise
user_nl_utils.append_to_user_nl_files(caseroot=self._caseroot,
component=component,
contents=contents_to_append)
# Verify
expected_contents = orig_contents + '\n' + contents_to_append + '\n'
self.assertFileContentsEqual(expected_contents,
os.path.join(self._caseroot, filename))
def test_append(self):
# Define some variables
component = 'foo'
# deliberately exclude new line from file contents, to make sure that's
# handled correctly
orig_contents = 'bar = 42'
contents_to_append = 'baz = 101'
# Setup
filename = self.write_user_nl_file(component, orig_contents)
# Exercise
user_nl_utils.append_to_user_nl_files(caseroot = self._caseroot,
component = component,
contents = contents_to_append)
# Verify
expected_contents = orig_contents + '\n' + contents_to_append + '\n'
self.assertFileContentsEqual(expected_contents,
os.path.join(self._caseroot, filename))
def test_append_multiple_files(self):
# Simulates a multi-instance test
component = 'foo'
orig_contents1 = 'bar = 42'
orig_contents2 = 'bar = 17'
contents_to_append = 'baz = 101'
# Setup
filename1 = self.write_user_nl_file(component, orig_contents1, suffix='_0001')
filename2 = self.write_user_nl_file(component, orig_contents2, suffix='_0002')
# Exercise
user_nl_utils.append_to_user_nl_files(caseroot = self._caseroot,
component = component,
contents = contents_to_append)
# Verify
expected_contents1 = orig_contents1 + '\n' + contents_to_append + '\n'
expected_contents2 = orig_contents2 + '\n' + contents_to_append + '\n'
self.assertFileContentsEqual(expected_contents1,
os.path.join(self._caseroot, filename1))
self.assertFileContentsEqual(expected_contents2,
os.path.join(self._caseroot, filename2))
def _case_one_setup(self):
super(LII2FINIDATAREAS, self)._case_one_setup()
append_to_user_nl_files(
caseroot=self._get_caseroot(),
component="clm",
contents="init_interp_method = 'use_finidat_areas'")
def _case_two_setup(self):
append_to_user_nl_files(caseroot=self._get_caseroot(),
component="clm",
contents="use_init_interp = .false.")
def _case_two_setup(self):
append_to_user_nl_files(caseroot = self._get_caseroot(),
component = "clm",
contents = "enable_water_tracer_consistency_checks=.false.")
def _case_setup(self, i):
# Second append user_nl change sepecific to case-i
append_to_user_nl_files(caseroot=self._case.get_value("CASEROOT"),
component=self.comp,
contents=nl_contents[i])
def _case_two_setup(self):
append_to_user_nl_files(caseroot = self._get_caseroot(),
component = "clm",
contents = "use_init_interp = .true.")
def _case_two_setup(self):
append_to_user_nl_files(
caseroot=self._get_caseroot(),
component="clm",
contents="soil_layerstruct_predefined = '4SL_2m'")
def _common_setup(self):
# Turn off history for CLM: We expect answer changes for CLM in the part of the
# world where we turn off one of the ice sheets in the single-ice sheet case.
append_to_user_nl_files(caseroot = self._get_caseroot(),
component = "clm",
contents = "hist_empty_htapes = .true.")
def _case_two_setup(self):
append_to_user_nl_files(caseroot = self._get_caseroot(),
component = "clm",
contents = "for_testing_use_second_grain_pool=.false.")
def _case_one_setup(self):
append_to_user_nl_files(caseroot=self._get_caseroot(),
component="clm",
contents="use_c13=F, use_c14=F")
