def myLocalLogTestFunc():
""" example of logging from a function
"""
logger = Logging.getLogger()
logger.info("Test of Message")
logger2 = Logging.getLogger("TestLogger")
logger2.info("Test2 of Message")
logger3 = Logging.getLogger(__name__)
logger3.info("Test3 of Message")
def mainMethod(args):
"""
@brief The "main" method.
@details
This method is the entry point to the program. In this sense, it is
similar to a main (and it is why it is called mainMethod()).
"""
logger = log.getLogger('sextractor')
logger.info('#')
logger.info('# Entering sextractor mainMethod()')
logger.info('#')
if args.zeropoint == "PER_S":
zeropoints = image.get_zeropoints(args.image,apply_exptime=True,zerokey=args.zerokey)
elif args.zeropoint == "INTEGRATED":
zeropoints = image.get_zeropoints(args.image,apply_exptime=False,zerokey=args.zerokey)
if args.outputcat == None :
args.outputcat=utils.rm_extension(args.image)+".cat"
image.sex(args.image,outputcat=args.outputcat)
catalog.apply_zeropoints(args.outputcat,zeropoints)
# !! Getting the option from the example option in defineSpecificProgramOption
# !! e.g string_option = args.string_value
logger.info('#')
logger.info('# Exiting sextractor mainMethod()')
logger.info('#')
class ClassExample(object):
"""
This is an example of the most basic Python class
"""
logger = log.getLogger('ClassExample')
def __init__(self, my_list):
"""
Constructor
"""
self._m_i = 5
self._m_list = my_list
def sumListValues(self):
"""
Method summing the elements of the list
"""
my_sum = 0
for element in self._m_list:
my_sum += element
return my_sum
@staticmethod
def product(first, second):
"""
This is an example static method
:param first: The first number
:param second: The second number
:return: The product of the two numbers
"""
return first * second
def mainMethod(args):
"""
@brief The "main" method.
@details This method is the entry point to the program. In this sense, it is similar to a main
(and it is why it is called mainMethod()). The code below contains the calls to the
different classes created for the first developer's workshop
See the ElementsProgram documentation for more details.
"""
logger = log.getLogger('SomeOtherScript')
logger.info('Entering SomeOtherScript mainMethod()')
#
# Log some of the arguments
#
int_from_configuration = args.int_option
if not int_from_configuration:
int_from_configuration = 9
logger.info('Example int : %d', int_from_configuration)
ThatFunction()
logger.info('Exiting SomeOtherScript mainMethod()')
return 0
def mainMethod(args):
"""
@brief The "main" method.
@details
This method is the entry point to the program. In this sense, it is
similar to a main (and it is why it is called mainMethod()).
"""
logger = log.getLogger('makeregionfile')
logger.info('#')
logger.info('# Entering makeregionfile mainMethod()')
logger.info('#')
# !! Getting the option from the example option in defineSpecificProgramOption
# !! e.g string_option = args.string_value
#
cat = catalog.read(args.catalog,format=args.format)
regionfile = utils.rm_extension(args.catalog)+'.reg'
if args.subtag is None :
args.subtag = ''
catalog.toRegionFile(cat, regionfile, symbol = args.symbol, subtag=args.subtag, wcs=args.wcs)
#
logger.info('#')
logger.info('# Exiting makeregionfile mainMethod()')
logger.info('#')
def _destruct(self):
"""Internal function to remove the resource"""
if self._name:
if self._keep_var in os.environ:
log = Logging.getLogger(None)
log.info("%s set: I do not remove the '%s' temporary path",
self._keep_var, self._name)
else:
self._delResource()
self._name = None
def mainMethod(args):
"""
Main
"""
exit_code = Exit.Code["OK"]
logger = log.getLogger('CreateElementsProject')
logger.info('#')
logger.info(
'# Logging from the mainMethod() of the CreateElementsProject script')
logger.info('#')
proj_name = args.project_name
proj_version = args.project_version
dependant_projects = args.dependency
destination_path = Project.setPath()
dependency = args.dependency
no_version_directory = args.no_version_directory
standalone = args.standalone
force_erase = args.erase
answer_yes = args.yes
logger.info('# Installation directory : %s', destination_path)
try:
# Set the project directory
project_dir = Project.getProjectDirectory(no_version_directory,
destination_path, proj_name,
proj_version)
Project.makeChecks(proj_name, proj_version, dependency,
dependant_projects)
Project.checkProjectExist(project_dir, no_version_directory,
force_erase, answer_yes)
# Create the project
Project.createProject(project_dir, proj_name, proj_version,
dependant_projects, standalone)
# Print all files created
ProjectCommonRoutines.printCreationList()
logger.info('# <%s> project successfully created.', project_dir)
except Exception as msg:
if str(msg):
logger.error(msg)
logger.error('# Script aborted.')
exit_code = Exit.Code["NOT_OK"]
else:
logger.info('# Script over.')
return exit_code
def __delitem__(self, key):
"""
Unset an environment variable.
Needed to provide the same interface as os.environ.
"""
key = self._fix_key(key)
if key not in self.env:
raise KeyError(key)
self.old_values[key] = self.env[key]
del self.env[key]
log = Logging.getLogger(None)
log.info("removed %s from environment", key)
def mainMethod(args): #pylint: disable=unused-argument
""" The "main" method.
This method is the entry point to the program. In this sense, it is similar to a main
(and it is why it is called mainMethod()). The code below contains the calls to the
different classes created for the first developer's workshop. See the ElementsProgram
documentation for more details.
"""
logger = Logging.getLogger('TestProgramExample')
logger.info('Entering TestProgramExample mainMethod()')
logger.info('Exiting TestProgramExample mainMethod()')
return Exit.Code["OK"]
def __init__(self, app_module,
parent_project_version=None, parent_project_name=None,
parent_project_vcs_version=None,
elements_module_name=None, elements_module_version=None,
search_dirs=None, original_path="",
elements_loglevel=logging.DEBUG):
self._app_module = importlib.import_module(app_module)
self._logger = log.getLogger('ElementsProgram')
self._elements_loglevel = elements_loglevel
self._parent_project_version = parent_project_version
self._parent_project_name = parent_project_name
self._parent_project_vcs_version = parent_project_vcs_version
self._elements_module_name = elements_module_name
self._elements_module_version = elements_module_version
self._search_dirs = search_dirs
self._program_path = os.path.dirname(original_path)
self._program_name = os.path.basename(original_path)
self._env = Environment()
def mainMethod(args):
""" The "main" method.
This method is the entry point to the program. In this sense, it is similar to a main
(and it is why it is called mainMethod()). The code below contains the calls to the
different classes created for the first developer's workshop
See the ElementsProgram documentation for more details.
"""
logger = Logging.getLogger('ProgramExample')
logger.info('Entering ProgramExample mainMethod()')
#
# function with log messages
#
myLocalLogTestFunc()
#
# Log some of the arguments
#
string_from_configuration = args.string_option
logger.info('Example string : %s', string_from_configuration)
second_element = args.int_list_option[1]
logger.info('Second elements from the list : %s', str(second_element))
logger.info("the int_option value %d", args.int_option)
logger.info("the threshold value %.1f", args.threshold)
#
# Calling a static method
#
result = ClassExample.product(3, 4)
logger.info('Static method result : %s', str(result))
#
# Calling the constructor and a method member
#
example_object = ClassExample(args.int_list_option)
logger.info('Sum of the list elements : %s',
str(example_object.sumListValues()))
logger.info('Exiting ProgramExample mainMethod()')
return Exit.Code["OK"]
def mainMethod(args):
"""
@brief The "main" method.
@details
This method is the entry point to the program. In this sense, it is
similar to a main (and it is why it is called mainMethod()).
"""
logger = log.getLogger('mergecatalogs')
logger.info('#')
logger.info('# Entering mergecatalogs mainMethod()')
logger.info('#')
# !! Getting the option from the example option in defineSpecificProgramOption
# !! e.g string_option = args.string_value
catalogs = []
for i,cat in enumerate(args.catalogs) :
if len(args.format) > 1:
ft = args.format[i]
catalogs.append(catalog.read(cat,format=ft))
if len(args.catalogs) == 2:
mcats=[utils.rm_extension(c)+'_matchtag.cat' for c in args.catalogs]
mergedcat = catalog.mergecats(catalogs,delta=args.tol,filters=args.filters,mcats=mcats)
#with open(args.outputcat, 'w') as f :
# fits.write(mergedcat, f)
catalog.writefits(mergedcat,args.outputcat)
logger.info('# Percentage of cat 1 matched : {} %'.format(100*(len(mergedcat)/len(catalogs[0]))))
logger.info('# Percentage of cat 2 matched : {} %'.format(100*(len(mergedcat)/len(catalogs[1]))))
logger.info('# Size ratio cat 2 / cat 1 : {} %'.format(100*(len(catalogs[1])/len(catalogs[0]))))
logger.info('#')
logger.info('# Exiting mergecatalogs mainMethod()')
logger.info('#')
def mainMethod(args):
"""
@brief The "main" method.
@details
This method is the entry point to the program. In this sense, it is
similar to a main (and it is why it is called mainMethod()).
"""
logger = log.getLogger('truewcs')
logger.info('#')
logger.info('# Entering truewcs mainMethod()')
logger.info('#')
instrument = image.read_instrument(args.instrument)
for imfile in args.images :
im=fits.open(imfile)
image.updatewcs(im,instrument)
im.writeto('truewcs_'+imfile)
logger.info('#')
logger.info('# Exiting truewcs mainMethod()')
logger.info('#')
def mainMethod(args):
"""
@brief The "main" method.
@details
This method is the entry point to the program. In this sense, it is
similar to a main (and it is why it is called mainMethod()).
"""
logger = log.getLogger('generate_weight_map')
logger.info('#')
logger.info('# Entering generate_weight_map mainMethod()')
logger.info('#')
# !! Getting the option from the example option in defineSpecificProgramOption
# !! e.g string_option = args.string_value
instrument=image.read_instrument(args.instrument)
wmap=image.generate_weight_map(instrument)
wmap.writeto(args.outfile,overwrite=True)
logger.info('#')
logger.info('# Exiting generate_weight_map mainMethod()')
logger.info('#')
def mainMethod(args):
"""
@brief The "main" method.
@details This method is the entry point to the program. In this sense, it is
similar to a main (and it is why it is called mainMethod()).
"""
logger = log.getLogger('GetElementsFiles')
exit_code = Exit.Code["OK"]
stem = args.file_stem
file_type = args.type
if stem.find(os.path.sep) != -1 and (not Path.HAS_SUBLEVELS[file_type]):
logger.error("The search stem cannot contain \"%s\" for the %s type", os.path.sep, file_type)
exit_code = Exit.Code["NOT_OK"]
locations = Path.getLocations(file_type, exist_only=True, with_defaults=args.with_defaults)
if stem:
found_list = Path.getAllPathFromLocations(stem, locations)
else:
logger.info("No stem provided. Listing all files")
found_list = []
for l in locations:
for root, _, files in os.walk(l):
for f in files:
found_list.append(os.path.join(root, f))
found_list = selfFilter(found_list, args.self)
for f in found_list:
print(f)
return exit_code
def mainMethod(args):
""" The "main" method.
This method is the entry point to the program. In this sense, it is similar to a main
(and it is why it is called mainMethod()). The code below contains the calls to the
different classes created for the first developer's workshop. See the ElementsProgram
documentation for more details.
"""
logger = log.getLogger('SwigProgramExample')
logger.info('Entering SwigProgramExample mainMethod()')
#
# Log some of the arguments
#
int_from_configuration = args.int_option
if not int_from_configuration:
int_from_configuration = 9
logger.info('Example int : %d', int_from_configuration)
func_result = functionExample(int_from_configuration)
logger.info('functionExample(%d) : %d', int_from_configuration,
func_result)
logger.info('Exiting SwigProgramExample mainMethod()')
return Exit.Code["OK"]
# along with this library; if not, write to the Free Software Foundation, Inc.,
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
#
import argparse
import os
from datetime import timedelta
import ElementsKernel.Logging as logging
import matplotlib.pyplot as plt
import numpy as np
from dateutil.parser import parse, parser as dateutil_parser
from matplotlib.ticker import FuncFormatter
from time import mktime
logger = logging.getLogger(__name__)
def _parse_sourcex_logs(path):
"""
Low level parsing of the logs
:param path:
SourceX logs
:return:
A dictionary with the log entries, with their timestamp, logger, level and message
"""
timestamp_parser = dateutil_parser()
log = dict(timestamp=[], logger=[], level=[], message=[])
with open(path) as fd:
for line in fd:
import argparse
import os
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeLists
from ElementsKernel import Logging
from ElementsKernel import Exit
try:
from builtins import input
except ImportError:
from __builtin__ import input
CMAKE_LISTS_FILE = 'CMakeLists.txt'
logger = Logging.getLogger('RemoveCppClass')
################################################################################
def getAllFiles(class_name, module_directory, module_name):
"""
Get all files related to a class
"""
delete_file_list = []
file_name_h = os.path.join(module_directory, module_name,
class_name) + '.h'
if os.path.exists(file_name_h):
delete_file_list.append(file_name_h)
file_name_cpp = os.path.join(module_directory, 'src', 'lib',
class_name) + '.cpp'
from argparse import RawTextHelpFormatter
try:
from builtins import input
except ImportError:
from __builtin__ import input
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeLists
from ElementsKernel import Logging
from ElementsKernel import Exit
CMAKE_LISTS_FILE = 'CMakeLists.txt'
logger = Logging.getLogger('RemovePythonProgram')
################################################################################
def getAllFiles(program_name, module_directory, module_name):
"""
Get all files related to a python program
"""
delete_file_list = []
file_name_conf = os.path.join(module_directory, 'conf', module_name,
program_name) + '.conf'
if os.path.exists(file_name_conf):
delete_file_list.append(file_name_conf)
file_name_cpp = os.path.join(module_directory, 'python', module_name,
program_name) + '.py'
import os
import argparse
import json
import ElementsKernel.Logging as log
from ElementsKernel import Exit
# pyling: disable=bare-except
try:
from urllib2 import urlopen # @UnusedImport @UnresolvedImport
from urllib2 import URLError # @UnusedImport @UnresolvedImport
except: # pylint: disable=bare-except
from urllib.request import urlopen # @ImportRedefinition
from urllib.error import URLError
logger = log.getLogger('NameCheck')
TYPES = ["cmake", "library", "executable"]
DEFAULT_TYPE = "cmake"
_localUrlOpen = urlopen
def getInfo(name, db_url, entity_type=DEFAULT_TYPE):
""" Get the informations about a given entity of a specific type """
full_url = db_url + "/NameCheck/exists?name=%s&type=%s" % (name,
entity_type)
logger.debug("The url for the name request: %s", full_url)
info = json.loads(_localUrlOpen(full_url).read().decode("utf-8"))
for u in ["url", "private_url"]:
if u in info and info[u]:
:date: 01/07/15
"""
import argparse
import os
import time
from ElementsKernel import Auxiliary
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeListsMacros
from ElementsKernel import Logging
from ElementsKernel import Exit
logger = Logging.getLogger('AddCppProgram')
# Define constants
CMAKE_LISTS_FILE = 'CMakeLists.txt'
PROGRAM_TEMPLATE_FILE = 'Program_template.cpp'
PROGRAM_TEMPLATE_FILE_IN = 'Program_template.cpp.in'
def createDirectories(module_dir):
"""
Create directories needed for a program
"""
standalone_directories = [os.path.join('src', 'program'), 'conf']
for d in standalone_directories:
target_dir = os.path.join(module_dir, d)
def mainMethod(args):
"""
@brief The "main" method.
@details
This method is the entry point to the program. In this sense, it is
similar to a main (and it is why it is called mainMethod()).
"""
logger = log.getLogger('runwcsfit')
logger.info('#')
logger.info('# Entering runwcsfit mainMethod()')
logger.info('#')
wcsfit.IMCORE = args.imcore_path
#if args.debug:
# logger.setLevel(logging.DEBUG)
image_name = args.image
if wcsfit.check_wcslib() == ERROR:
sys.exit(1)
if wcsfit.check_exe_in_path() == ERROR:
sys.exit(1)
# Check number of extensions and merge quadrants into ccd image if necessary
n_extensions = wcsfit.get_number_of_extensions(image_name)
if n_extensions in (4, 144): # Quadrants
wcsfit.merge_quadrants(image_name)
image_name = image_name.replace('.fit', '_ccd.fit')
elif n_extensions in (1, 36): # CCD
pass
else:
logger.error(
'fits file does not contain correct number of extensions ({})'.
format(n_extensions))
sys.exit(1)
# Deal with the weight map if needed
if args.weight.find('noconf') == -1:
weight_name = args.weight
n_extensions = wcsfit.get_number_of_extensions(image_name)
if n_extensions in (4, 144): # Quadrants
wcsfit.merge_quadrants(weight_name)
weight_name = weight_name.replace('.fit', '_ccd.fit')
wcsfit.weight_to_conf(image_name, weight_name)
# Fit astrometry
with wcsfit.CCDImage(image_name, mode=args.mode,
save_backup=args.copy) as img:
img.fit_astrometry(refcat=args.refcat,
makecat=args.nocat,
wcsconf=args.wcsconf,
fitpv=args.fitpv)
# Primt summary
print_summary(image_name)
logger.info('#')
logger.info('# Exiting runwcsfit mainMethod()')
logger.info('#')
"""
import argparse
import os
import time
from ElementsKernel import Auxiliary
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeLists
from ElementsKernel import ParseCmakeListsMacros
from ElementsKernel import Logging
from ElementsKernel import Exit
logger = Logging.getLogger('AddPythonProgram')
# Define constants
CMAKE_LISTS_FILE = 'CMakeLists.txt'
PROGRAM_TEMPLATE_FILE = 'PythonProgram_template.py'
PROGRAM_TEMPLATE_FILE_IN = 'PythonProgram_template.py.in'
################################################################################
def createDirectories(module_dir, module_name):
"""
Create directories needed for a python program
"""
standalone_directories = [
os.path.join('python', module_name),
@file tests/python/smoke_test.py
@date 12/16/15
@author user
"""
import py.test
import os.path
import glob
import extSim.utils
import extSim.extsim
from astropy.io import fits
import shutil
from string import uppercase as amptags
from fixtures.PyDataSyncFixture import *
import ElementsKernel.Logging as logging
log = logging.getLogger('image')
data_dir = os.path.join(os.environ["PHOTROOT"],"tests", "data")
def symlinks(datafiles,workspace):
for dst,src in datafiles.items():
os.symlink(os.path.join(data_dir,src), os.path.join(workspace,dst))
def simulate():
datafiles={"catalog.txt":"myEXTrandomcat-sersics.txt", "target.json":"des_target.json", "instrument.json":"des_test_instrument.json", "flat.fits":"des_testflat.fits", "bias.fits":"des_testbias.fits"}
with extSim.utils.mock_workspace('test_smoke_sersics_ws_',del_tmp=False) as workspace:
symlinks(datafiles,workspace)
args = extSim.extsim.parseOptions(['--workspace',workspace],defaultconfig='smoke_test.conf')
extSim.extsim.mainMethod(args)
return args
import argparse
import os
from ElementsKernel import Exit
from ElementsKernel import Auxiliary
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeLists
from ElementsKernel import ParseCmakeListsMacros
from ElementsKernel import Logging
try:
from builtins import input
except ImportError:
from __builtin__ import input
logger = Logging.getLogger('AddElementsModule')
# Define constants
CMAKE_LISTS_FILE = 'CMakeLists.txt'
CMAKE_LISTS_FILE_IN = 'CMakeLists.txt.mod.in'
AUX_MOD_RST_IN = 'doc_module.rst.in'
target_locations = {
CMAKE_LISTS_FILE_IN: "CMakeLists.txt",
AUX_MOD_RST_IN: "doc/doc_module.rst"
}
################################################################################
def checkCmakelistFileExist(project_directory):
:date: 01/07/15
"""
import os
import argparse
import time
from ElementsKernel import Auxiliary
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeLists
from ElementsKernel import Logging
from ElementsKernel import Exit
logger = Logging.getLogger('AddPythonModule')
# Define constants
CMAKE_LISTS_FILE = 'CMakeLists.txt'
PYTEST_TEMPLATE_FILE_IN = 'PythonTest_template.py.in'
PYMODULE_TEMPLATE_FILE_IN = 'PythonModule_template.py.in'
################################################################################
def createDirectories(module_dir, module_name):
"""
Create directories needed for a python module
"""
standalone_directories = [
os.path.join('python', module_name),
import os
import re
import ELEMENTS_VERSION # @UnresolvedImport
import ElementsKernel.Logging as log
from ElementsKernel import Auxiliary
from ElementsKernel import ProjectCommonRoutines
try:
from builtins import input
except ImportError:
from __builtin__ import input
logger = log.getLogger('CreateElementsProject')
AUX_CMAKE_LIST_IN = "CMakeLists.txt.in"
AUX_MAKE_FILE_IN = "Makefile.in"
AUX_PROJ_RST_IN = "doc_project.rst.in"
AUX_PROJ_MAINPAGE_IN = "mainpage.dox.in"
AUX_GITIGNORE_IN = "gitignore_template.in"
AUX_GITATTRIBUTES_IN = "gitattributes_template.in"
AUX_EDITOR_CONFIG = "editorconfig"
AUX_CLANG_FORMAT = "clang-format"
target_locations = { AUX_CMAKE_LIST_IN: "CMakeLists.txt",
AUX_MAKE_FILE_IN: "Makefile",
AUX_PROJ_RST_IN: "doc/doc_project.rst",
AUX_PROJ_MAINPAGE_IN: "doc/mainpage.dox",
AUX_GITIGNORE_IN: ".gitignore",
import ElementsKernel.Auxiliary as aux
try:
from builtins import input
except ImportError:
from __builtin__ import input
# Define a global list containing files created or modified
# by the python scripts for the creation of a Elements project
_filelist = []
# Define regex for name & version checking
NAME_REGEX = r"^[A-Za-z0-9][A-Za-z0-9_-]*$"
VERSION_REGEX = r"^(\d+\.\d+(\.\d+)?|HEAD)$"
logger = log.getLogger('ProjectCommonRoutines')
CMAKE_LISTS_FILE = 'CMakeLists.txt'
################################################################################
def addItemToCreationList(element):
"""
Add an element to the global list.
"""
_filelist.append(element)
################################################################################
def printCreationList():
"""
"""
@file python/Phot/photometry.py
@date 03/16/16
@author user
"""
from __future__ import division
import ElementsKernel.Logging as log
logger = log.getLogger('image')
import subprocess, os, sys
from . import utils
from astropy.io import fits
from astropy.modeling import models, fitting
from astropy.wcs import WCS
from matplotlib.colors import LogNorm
import numpy as np
import numpy.ma as ma
from string import Template
from matplotlib import pylab as P
import json
from scipy.ndimage.measurements import center_of_mass
def parse_section_list(sectionlist):
section = [sys.maxint, 0, sys.maxint, None]
for sectionstring in sectionlist :
s = parse_section_string(sectionstring)
section = [min(s[0], section[0]), max(s[1],section[1]), min(s[2],section[2]), max(s[3],section[3])]
return section
def parse_section_string(section):
section=section[1:-1].replace(':',',').split(',')
import argparse
import os
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeLists
from ElementsKernel import Logging
from ElementsKernel import Exit
try:
from builtins import input
except ImportError:
from __builtin__ import input
CMAKE_LISTS_FILE = 'CMakeLists.txt'
logger = Logging.getLogger('RemovePythonModule')
################################################################################
def getAllFiles(pymodule_name, module_directory, module_name):
"""
Get all files related to a python module
"""
delete_file_list = []
file_name_test = os.path.join(module_directory, 'tests', 'python', \
pymodule_name) + '_test.py'
if os.path.exists(file_name_test):
delete_file_list.append(file_name_test)
file_name_py = os.path.join(module_directory, 'python', module_name, \
pymodule_name) + '.py'
:date: 03/08/17
"""
import argparse
import os
import time
import stat
from ElementsKernel import Auxiliary
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeLists
from ElementsKernel import Logging
from ElementsKernel import Exit
logger = Logging.getLogger('AddScript')
# Define constants
CMAKE_LISTS_FILE = 'CMakeLists.txt'
PROGRAM_TEMPLATE_FILE = 'Script_template'
PROGRAM_TEMPLATE_FILE_IN = 'Script_template.in'
################################################################################
def createDirectories(module_dir):
"""
Create directories needed for a python program
"""
# Create the scripts directory
scripts_path = os.path.join(module_dir, 'scripts')
def _setupLogging(arg_parser):
options = arg_parser.parse_known_args()[0]
if options.log_level:
log.setLevel(options.log_level.upper())
if options.log_file:
log.setLogFile(options.log_file)
import argparse
import os
from ElementsKernel import ProjectCommonRoutines
from ElementsKernel import ParseCmakeLists
from ElementsKernel import Logging
from ElementsKernel import Exit
try:
from builtins import input
except ImportError:
from __builtin__ import input
CMAKE_LISTS_FILE = 'CMakeLists.txt'
logger = Logging.getLogger('RemoveCppProgram')
################################################################################
def getAllFiles(program_name, module_directory, module_name):
"""
Get all files related to a Cpp program
"""
delete_file_list = []
file_name_conf = os.path.join(module_directory, 'conf', module_name,
program_name) + '.conf'
if os.path.exists(file_name_conf):
delete_file_list.append(file_name_conf)
file_name_cpp = os.path.join(module_directory, 'src', 'program',
program_name) + '.cpp'