def on_but_plot(self):
logger.debug('on_but_plot', __name__)
try :
cp.plotimgspe.close()
try : del cp.plotimgspe
except : pass
except :
arr = gu.get_array_from_file( fnm.path_pedestals_ave() )
if arr is None : return
#print arr.shape,'\n', arr
cp.plotimgspe = PlotImgSpe(None, arr, ifname=fnm.path_pedestals_ave(), ofname=fnm.path_peds_aver_plot())
#cp.plotimgspe.setParent(self)
cp.plotimgspe.move(cp.guimain.pos().__add__(QtCore.QPoint(720,120)))
cp.plotimgspe.show()
def setTableInfoItems(self):
self.item_data_file.setText(os.path.basename(fnm.path_data_xtc_cond()))
if cp.bat_dark_is_used.value():
self.item_dark_file.setText(
os.path.basename(fnm.path_pedestals_ave()))
else:
self.item_dark_file.setText('is not used')
if cp.ccdcorr_flatfield.value():
self.item_flat_file.setText(os.path.basename(fnm.path_flat()))
else:
self.item_flat_file.setText('is not used')
if cp.ccdcorr_blemish.value():
self.item_blem_file.setText(os.path.basename(fnm.path_blem()))
else:
self.item_blem_file.setText('is not used')
self.item_data_start.setText(str(cp.bat_data_start.value()))
self.item_data_end.setText(str(cp.bat_data_end.value()))
self.item_data_total.setText(str(cp.bat_data_total.value()))
self.item_data_time.setText(
str(cp.bat_data_dt_ave.value()) + u'\u00B1' +
str(cp.bat_data_dt_rms.value()))
def make_psana_cfg_file_for_peds_aver(self):
self.path_in = apputils.AppDataPath(
'CorAna/scripts/psana-peds-aver.cfg').path()
self.path_out = fnm.path_peds_aver_psana_cfg()
self.d_subs = {
'FNAME_XTC': fnm.path_dark_xtc_cond(),
'SKIP': str(cp.bat_dark_start.value() - 1),
'EVENTS':
str(cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1),
'IMG_REC_MODULE': str(cp.bat_img_rec_mod.value()),
'DETINFO': str(cp.bat_det_info.value()),
'FNAME_PEDS_AVE': fnm.path_pedestals_ave(),
'FNAME_PEDS_RMS': fnm.path_pedestals_rms()
}
self.d_subs['FNAME_HOTPIX_MASK'] = fnm.path_hotpix_mask()
self.d_subs['HOTPIX_THRESHOLD_ADU'] = str(cp.mask_hot_thr.value())
#if cp.mask_hot_is_used.value() :
# self.d_subs['FNAME_HOTPIX_MASK' ] = fnm.path_hotpix_mask()
# self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
#else :
# self.d_subs['FNAME_HOTPIX_MASK' ] = ''
# self.d_subs['HOTPIX_THRESHOLD_ADU'] = '10000'
self.print_substitution_dict()
self.make_cfg_file()
def make_psana_cfg_file_for_cora_split (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-cora-split.cfg').path()
self.path_out = fnm.path_cora_split_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : str( cp.bat_data_start.value() - 1 ),
'EVENTS' : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'PATH_PREFIX_CORA': str( fnm.path_prefix_cora() ),
'IMG_NPARTS' : str( cp.bat_img_nparts.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
}
if cp.lld_type.value() == 'ADU' : # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU' ] = str( cp.lld_adu.value() )
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS' :
self.d_subs['THRESHOLD_ADU' ] = '-123456' # = default value - will not use trheshold
self.d_subs['THRESHOLD_NRMS'] = str( cp.lld_rms.value() )
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else :
self.d_subs['THRESHOLD_ADU' ] = '-123456' # = default value - will not use trheshold
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
self.print_substitution_dict()
self.make_cfg_file()
def make_psana_cfg_file_for_cora_split (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-cora-split.cfg').path()
self.path_out = fnm.path_cora_split_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : str( cp.bat_data_start.value() - 1 ),
'EVENTS' : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'PATH_PREFIX_CORA': str( fnm.path_prefix_cora() ),
'IMG_NPARTS' : str( cp.bat_img_nparts.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
}
if cp.lld_type.value() == 'ADU' : # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU' ] = str( cp.lld_adu.value() )
self.d_subs['DO_CONST_THR' ] = 'true'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS' :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = str( cp.lld_rms.value() )
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
self.print_substitution_dict()
self.make_cfg_file()
def make_psana_cfg_file_for_peds_aver_v1 (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-peds-aver.cfg').path()
self.path_out = fnm.path_peds_aver_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_dark_xtc_cond(),
'SKIP' : str( cp.bat_dark_start.value() - 1 ),
'EVENTS' : str( cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
'FNAME_PEDS_RMS' : fnm.path_pedestals_rms()
}
self.d_subs['FNAME_HOTPIX_MASK' ] = fnm.path_hotpix_mask()
self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
#if cp.mask_hot_is_used.value() :
# self.d_subs['FNAME_HOTPIX_MASK' ] = fnm.path_hotpix_mask()
# self.d_subs['HOTPIX_THRESHOLD_ADU'] = str( cp.mask_hot_thr.value() )
#else :
# self.d_subs['FNAME_HOTPIX_MASK' ] = ''
# self.d_subs['HOTPIX_THRESHOLD_ADU'] = '10000'
#self.print_substitution_dict()
#self.make_cfg_file()
txt_cfg = self.text_for_section()
self.save_cfg_file(txt_cfg, self.path_out)
def on_but_plot(self):
logger.debug('on_but_plot', __name__)
try:
cp.plotimgspe.close()
try:
del cp.plotimgspe
except:
pass
except:
arr = gu.get_array_from_file(fnm.path_pedestals_ave())
if arr == None: return
#print arr.shape,'\n', arr
cp.plotimgspe = PlotImgSpe(None,
arr,
ifname=fnm.path_pedestals_ave(),
ofname=fnm.path_peds_aver_plot())
#cp.plotimgspe.setParent(self)
cp.plotimgspe.move(cp.guimain.pos().__add__(QtCore.QPoint(
720, 120)))
cp.plotimgspe.show()
def make_psana_cfg_file_for_cora_split_v1(self):
self.path_in = apputils.AppDataPath(
'CorAna/scripts/psana-cora-split.cfg').path()
self.path_out = fnm.path_cora_split_psana_cfg()
self.d_subs = {
'FNAME_XTC': fnm.path_data_xtc_cond(),
'SKIP': str(cp.bat_data_start.value() - 1),
'EVENTS':
str(cp.bat_data_end.value() - cp.bat_data_start.value() + 1),
'IMG_REC_MODULE': str(cp.bat_img_rec_mod.value()),
'DETINFO': str(cp.bat_det_info.value()),
'PATH_PREFIX_CORA': str(fnm.path_prefix_cora()),
'IMG_NPARTS': str(cp.bat_img_nparts.value()),
'FNAME_PEDS_AVE': fnm.path_pedestals_ave(),
'FNAME_DATA_AVE': fnm.path_data_ave(),
'FNAME_DATA_RMS': fnm.path_data_rms()
}
fname_imon_cfg = fnm.path_cora_split_imon_cfg()
self.make_imon_cfg_file(fname_imon_cfg)
self.d_subs['FNAME_IMON_CFG'] = str(fname_imon_cfg)
if cp.lld_type.value() == 'ADU': # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU'] = str(cp.lld_adu.value())
self.d_subs['DO_CONST_THR'] = 'true'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS':
self.d_subs['THRESHOLD_ADU'] = '0'
self.d_subs['DO_CONST_THR'] = 'false'
self.d_subs['THRESHOLD_NRMS'] = str(cp.lld_rms.value())
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else:
self.d_subs['THRESHOLD_ADU'] = '0'
self.d_subs['DO_CONST_THR'] = 'false'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
if os.path.lexists(fnm.path_cora_split_map_static_q()):
self.d_subs['FNAME_MAP_BINS'] = fnm.path_cora_split_map_static_q()
else:
self.d_subs['FNAME_MAP_BINS'] = ''
self.d_subs['FNAME_INT_BINS'] = fnm.path_cora_split_int_static_q()
self.d_subs['NUMBER_OF_BINS'] = str(cp.ana_stat_part_q.value())
#self.print_substitution_dict()
#self.make_cfg_file()
txt_cfg = self.text_for_section()
self.save_cfg_file(txt_cfg, self.path_out)
def make_psana_cfg_file_for_peds_aver (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-peds-aver.cfg').path()
self.path_out = fnm.path_peds_aver_psana_cfg()
self.d_subs = {'SKIP' : str( cp.bat_dark_start.value() - 1 ),
'EVENTS' : str( cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'FILE_AVE' : fnm.path_pedestals_ave(),
'FILE_RMS' : fnm.path_pedestals_rms()
}
self.print_substitution_dict()
self.make_cfg_file()
def make_psana_cfg_file_for_cora_split_v1 (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-cora-split.cfg').path()
self.path_out = fnm.path_cora_split_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_data_xtc_cond(),
'SKIP' : str( cp.bat_data_start.value() - 1 ),
'EVENTS' : str( cp.bat_data_end.value() - cp.bat_data_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'PATH_PREFIX_CORA': str( fnm.path_prefix_cora() ),
'IMG_NPARTS' : str( cp.bat_img_nparts.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
'FNAME_DATA_AVE' : fnm.path_data_ave(),
'FNAME_DATA_RMS' : fnm.path_data_rms()
}
fname_imon_cfg = fnm.path_cora_split_imon_cfg()
self.make_imon_cfg_file (fname_imon_cfg)
self.d_subs['FNAME_IMON_CFG' ] = str( fname_imon_cfg )
if cp.lld_type.value() == 'ADU' : # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU' ] = str( cp.lld_adu.value() )
self.d_subs['DO_CONST_THR' ] = 'true'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS' :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = str( cp.lld_rms.value() )
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
if os.path.lexists( fnm.path_cora_split_map_static_q() ) :
self.d_subs['FNAME_MAP_BINS' ] = fnm.path_cora_split_map_static_q()
else :
self.d_subs['FNAME_MAP_BINS' ] = ''
self.d_subs['FNAME_INT_BINS' ] = fnm.path_cora_split_int_static_q()
self.d_subs['NUMBER_OF_BINS' ] = str( cp.ana_stat_part_q.value() )
#self.print_substitution_dict()
#self.make_cfg_file()
txt_cfg = self.text_for_section()
self.save_cfg_file(txt_cfg, self.path_out)
def make_psana_cfg_file_for_peds_aver (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-peds-aver.cfg').path()
self.path_out = fnm.path_peds_aver_psana_cfg()
self.d_subs = {'FNAME_XTC' : fnm.path_dark_xtc_cond(),
'SKIP' : str( cp.bat_dark_start.value() - 1 ),
'EVENTS' : str( cp.bat_dark_end.value() - cp.bat_dark_start.value() + 1 ),
'IMG_REC_MODULE' : str( cp.bat_img_rec_mod.value() ),
'DETINFO' : str( cp.bat_det_info.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
'FNAME_PEDS_RMS' : fnm.path_pedestals_rms()
}
self.print_substitution_dict()
self.make_cfg_file()
def on_but_browse(self):
logger.debug('on_but_browse', __name__)
try:
cp.guifilebrowser.close()
self.but_browse.setStyleSheet(cp.styleButtonBad)
except:
self.but_browse.setStyleSheet(cp.styleButtonGood)
cp.guifilebrowser = GUIFileBrowser(
None,
fnm.get_list_of_files_pedestals(),
selected_file=fnm.path_pedestals_ave())
cp.guifilebrowser.move(cp.guimain.pos().__add__(
QtCore.QPoint(740,
140))) # open window with offset w.r.t. parent
cp.guifilebrowser.show()
def add_cfg_module_ndarraverage_for_peds_aver (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-module-ndarraverage.cfg').path()
mod = 'ImgAlgos.NDArrAverage'
self.d_subs = {
'MODULE' : mod,
'DETINFO' : str( cp.bat_det_info.value() ),
'IMAGE' : 'img',
'FNAME_AVE' : fnm.path_pedestals_ave(),
'FNAME_RMS' : fnm.path_pedestals_rms(),
'FNAME_MASK' : fnm.path_hotpix_mask(),
'THR_RMS_ADU' : str( cp.mask_hot_thr.value() ),
'PRINT_BITS' : '57'
}
self.add_module_in_cfg (mod)
def add_cfg_module_ndarraverage_for_peds_aver(self):
self.path_in = apputils.AppDataPath(
'CorAna/scripts/psana-module-ndarraverage.cfg').path()
mod = 'ImgAlgos.NDArrAverage'
self.d_subs = {
'MODULE': mod,
'DETINFO': str(cp.bat_det_info.value()),
'IMAGE': 'img',
'FNAME_AVE': fnm.path_pedestals_ave(),
'FNAME_RMS': fnm.path_pedestals_rms(),
'FNAME_MASK': fnm.path_hotpix_mask(),
'THR_RMS_ADU': str(cp.mask_hot_thr.value()),
'PRINT_BITS': '57'
}
self.add_module_in_cfg(mod)
def add_cfg_trailer_for_cora_split (self) :
self.path_in = apputils.AppDataPath('CorAna/scripts/psana-cora-split-trailer.cfg').path()
self.d_subs = {'DETINFO' : str( cp.bat_det_info.value() ),
'PATH_PREFIX_CORA': str( fnm.path_prefix_cora() ),
'IMG_NPARTS' : str( cp.bat_img_nparts.value() ),
'FNAME_PEDS_AVE' : fnm.path_pedestals_ave(),
'FNAME_DATA_AVE' : fnm.path_data_ave(),
'FNAME_DATA_RMS' : fnm.path_data_rms()
}
fname_imon_cfg = fnm.path_cora_split_imon_cfg()
self.make_imon_cfg_file (fname_imon_cfg)
self.d_subs['FNAME_IMON_CFG' ] = str( fname_imon_cfg )
if cp.lld_type.value() == 'ADU' : # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU' ] = str( cp.lld_adu.value() )
self.d_subs['DO_CONST_THR' ] = 'true'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS' :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = str( cp.lld_rms.value() )
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else :
self.d_subs['THRESHOLD_ADU' ] = '0'
self.d_subs['DO_CONST_THR' ] = 'false'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
if os.path.lexists( fnm.path_cora_split_map_static_q() ) :
self.d_subs['FNAME_MAP_BINS' ] = fnm.path_cora_split_map_static_q()
else :
self.d_subs['FNAME_MAP_BINS' ] = ''
self.d_subs['FNAME_INT_BINS' ] = fnm.path_cora_split_int_static_q()
self.d_subs['NUMBER_OF_BINS' ] = str( cp.ana_stat_part_q.value() )
#self.print_substitution_dict()
self.str_of_modules += ' ImgAlgos.ImgCalib ImgAlgos.ImgIntMonCorr ImgAlgos.ImgIntForBins ImgAlgos.ImgVsTimeSplitInFiles ImgAlgos.ImgAverage'
self.txt_cfg_body += self.text_for_section()
def add_cfg_trailer_for_cora_split(self):
self.path_in = apputils.AppDataPath(
'CorAna/scripts/psana-cora-split-trailer.cfg').path()
self.d_subs = {
'DETINFO': str(cp.bat_det_info.value()),
'PATH_PREFIX_CORA': str(fnm.path_prefix_cora()),
'IMG_NPARTS': str(cp.bat_img_nparts.value()),
'FNAME_PEDS_AVE': fnm.path_pedestals_ave(),
'FNAME_DATA_AVE': fnm.path_data_ave(),
'FNAME_DATA_RMS': fnm.path_data_rms()
}
fname_imon_cfg = fnm.path_cora_split_imon_cfg()
self.make_imon_cfg_file(fname_imon_cfg)
self.d_subs['FNAME_IMON_CFG'] = str(fname_imon_cfg)
if cp.lld_type.value() == 'ADU': # ['NONE', 'ADU', 'RMS']
self.d_subs['THRESHOLD_ADU'] = str(cp.lld_adu.value())
self.d_subs['DO_CONST_THR'] = 'true'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
elif cp.lld_type.value() == 'RMS':
self.d_subs['THRESHOLD_ADU'] = '0'
self.d_subs['DO_CONST_THR'] = 'false'
self.d_subs['THRESHOLD_NRMS'] = str(cp.lld_rms.value())
self.d_subs['FNAME_PEDS_RMS'] = fnm.path_pedestals_rms()
else:
self.d_subs['THRESHOLD_ADU'] = '0'
self.d_subs['DO_CONST_THR'] = 'false'
self.d_subs['THRESHOLD_NRMS'] = '0'
self.d_subs['FNAME_PEDS_RMS'] = ''
if os.path.lexists(fnm.path_cora_split_map_static_q()):
self.d_subs['FNAME_MAP_BINS'] = fnm.path_cora_split_map_static_q()
else:
self.d_subs['FNAME_MAP_BINS'] = ''
self.d_subs['FNAME_INT_BINS'] = fnm.path_cora_split_int_static_q()
self.d_subs['NUMBER_OF_BINS'] = str(cp.ana_stat_part_q.value())
#self.print_substitution_dict()
self.str_of_modules += ' ImgAlgos.ImgCalib ImgAlgos.ImgIntMonCorr ImgAlgos.ImgIntForBins ImgAlgos.ImgVsTimeSplitInFiles ImgAlgos.ImgAverage'
self.txt_cfg_body += self.text_for_section()
def on_but_browse(self):
logger.debug('on_but_browse', __name__)
try :
cp.guifilebrowser.close()
self.but_browse.setStyleSheet(cp.styleButtonBad)
except :
self.but_browse.setStyleSheet(cp.styleButtonGood)
cp.guifilebrowser = GUIFileBrowser(None, fnm.get_list_of_files_pedestals(), selected_file=fnm.path_pedestals_ave())
cp.guifilebrowser.move(cp.guimain.pos().__add__(QtCore.QPoint(740,140))) # open window with offset w.r.t. parent
cp.guifilebrowser.show()
def setTableInfoItems(self) :
self.item_data_file.setText( os.path.basename(fnm.path_data_xtc_cond()) )
if cp.bat_dark_is_used.value() : self.item_dark_file.setText( os.path.basename(fnm.path_pedestals_ave()) )
else : self.item_dark_file.setText( 'is not used' )
if cp.ccdcorr_flatfield.value() : self.item_flat_file.setText( os.path.basename(fnm.path_flat()) )
else : self.item_flat_file.setText( 'is not used' )
if cp.ccdcorr_blemish.value() : self.item_blam_file.setText( os.path.basename(fnm.path_blam()) )
else : self.item_blam_file.setText( 'is not used' )
self.item_data_start.setText ( str( cp.bat_data_start.value() ) )
self.item_data_end .setText ( str( cp.bat_data_end .value() ) )
self.item_data_total.setText ( str( cp.bat_data_total.value() ) )
self.item_data_time .setText ( str( cp.bat_data_dt_ave.value() ) + u'\u00B1'
+ str( cp.bat_data_dt_rms.value() ) )
