def json_protocols_decoder(
self): # Decodes the content of the protocols request
meta = MetaData(self.get_json_protocols_request(),
self.get_protocols_url())
meta.decode_json()
self.decoded_json_protocols = meta.get_decoded()
def json_files_decoder(self): # Decodes the files JSON
meta = MetaData(self.get_json_files_request(), self.get_files_url())
meta.decode_json()
self.decoded_json_files = meta.get_decoded()
kw = ["cancer"]
x.insert_keywords(kw)
dic = {"samplecount" : "[200 TO 500]"}
#dic = {}
x.insert_criteria(dic)
x.url_generator("experiments") # Creates the URL to be requested
request = File_Requester(x.get_url())
#print(request.get_url())
request.do_request()
request.get_request()
request.do_content() # Returns the content of the requested URL
#print(request.get_content())
decoder = MetaData(request.get_content(), request.get_url())
decoder.decode_json() # Decodes the content JSON
#print(decoder.get_decoded())
exp = Experiment(decoder.get_decoded()["experiments"]["experiment"][13]) # Created an Experiment Instance
#print(exp.__dict__)
#print(exp.accession)
#exp.do_files_url()
#print(exp.get_files_url())
#exp.json_files_requester()
#print(exp.get_json_files_request())
#exp.json_files_decoder()
#print(exp.get_decoded_json_files())
#exp.create_files()
#print(exp.files)
#exp.download_all_files("C:/Users/utilizador/Google Drive/drive/Bioinformática/1_ano/2_Semestre/Projeto/Scripts/Downloads")
exp.do_idf_file("C:/Users/utilizador/Google Drive/drive/Bioinformática/1_ano/2_Semestre/Projeto/Scripts/Downloads") # Downloads and creates an data with IDF data
#print(exp.get_idf_file())
exp.do_sdrf_file("C:/Users/utilizador/Google Drive/drive/Bioinformática/1_ano/2_Semestre/Projeto/Scripts/Downloads") #Downloads and creates an data structure with SDRF data
#print(exp.get_sdrf_file())