def init_network_from_config(self, config):
self.pretrain = pretrainFromConfig(config)
self.max_seqs = config.int('max_seqs', -1)
self.compression = config.bool('compression', False)
epoch, model_epoch_filename = self.get_epoch_model(config)
assert model_epoch_filename or self.start_epoch
if model_epoch_filename:
print("loading weights from", model_epoch_filename, file=log.v2)
last_model_hdf = h5py.File(model_epoch_filename, "r")
else:
last_model_hdf = None
if config.bool('initialize_from_model', False):
# That's only about the topology, not the params.
print("initializing network topology from model", file=log.v5)
assert last_model_hdf, "last model not specified. use 'load' in config. or don't use 'initialize_from_model'"
network = LayerNetwork.from_hdf_model_topology(last_model_hdf)
else:
if self.pretrain:
# This would be obsolete if we don't want to load an existing model.
# In self.init_train_epoch(), we initialize a new model.
network = self.pretrain.get_network_for_epoch(epoch or self.start_epoch)
else:
network = LayerNetwork.from_config_topology(config)
# We have the parameters randomly initialized at this point.
# In training, as an initialization, we can copy over the params of an imported model,
# where our topology might slightly differ from the imported model.
if config.value('import_model_train_epoch1', '') and self.start_epoch == 1:
assert last_model_hdf
old_network = LayerNetwork.from_hdf_model_topology(last_model_hdf)
old_network.load_hdf(last_model_hdf)
last_model_hdf.close()
# Copy params to new network.
from NetworkCopyUtils import intelli_copy_layer
# network.hidden are the input + all hidden layers.
for layer_name, layer in sorted(old_network.hidden.items()):
print("Copy hidden layer %s" % layer_name, file=log.v3)
intelli_copy_layer(layer, network.hidden[layer_name])
for layer_name, layer in sorted(old_network.output.items()):
print("Copy output layer %s" % layer_name, file=log.v3)
intelli_copy_layer(layer, network.output[layer_name])
print("Not copied hidden: %s" % sorted(set(network.hidden.keys()).difference(old_network.hidden.keys())), file=log.v3)
print("Not copied output: %s" % sorted(set(network.output.keys()).difference(old_network.output.keys())), file=log.v3)
# Maybe load existing model parameters.
elif last_model_hdf:
network.load_hdf(last_model_hdf)
last_model_hdf.close()
EngineUtil.maybe_subtract_priors(network, self.train_data, config)
self.network = network
if config.has('dump_json'):
self.network_dump_json(config.value('dump_json', ''))
self.print_network_info()
def init_network_from_config(self, config):
self.pretrain = pretrainFromConfig(config)
self.max_seqs = config.int('max_seqs', -1)
epoch, model_epoch_filename = self.get_epoch_model(config)
assert model_epoch_filename or self.start_epoch
if model_epoch_filename:
print >> log.v2, "loading weights from", model_epoch_filename
last_model_hdf = h5py.File(model_epoch_filename, "r")
else:
last_model_hdf = None
if config.bool('initialize_from_model', False):
# That's only about the topology, not the params.
print >> log.v5, "initializing network topology from model"
assert last_model_hdf, "last model not specified. use 'load' in config. or don't use 'initialize_from_model'"
network = LayerNetwork.from_hdf_model_topology(last_model_hdf)
else:
if self.pretrain:
# This would be obsolete if we don't want to load an existing model.
# In self.init_train_epoch(), we initialize a new model.
network = self.pretrain.get_network_for_epoch(epoch or self.start_epoch)
else:
network = LayerNetwork.from_config_topology(config)
# We have the parameters randomly initialized at this point.
# In training, as an initialization, we can copy over the params of an imported model,
# where our topology might slightly differ from the imported model.
if config.value('import_model_train_epoch1', '') and self.start_epoch == 1:
assert last_model_hdf
old_network = LayerNetwork.from_hdf_model_topology(last_model_hdf)
old_network.load_hdf(last_model_hdf)
last_model_hdf.close()
# Copy params to new network.
from NetworkCopyUtils import intelli_copy_layer
# network.hidden are the input + all hidden layers.
for layer_name, layer in sorted(old_network.hidden.items()):
print >> log.v3, "Copy hidden layer %s" % layer_name
intelli_copy_layer(layer, network.hidden[layer_name])
for layer_name, layer in sorted(old_network.output.items()):
print >> log.v3, "Copy output layer %s" % layer_name
intelli_copy_layer(layer, network.output[layer_name])
print >> log.v3, "Not copied hidden: %s" % sorted(set(network.hidden.keys()).difference(old_network.hidden.keys()))
print >> log.v3, "Not copied output: %s" % sorted(set(network.output.keys()).difference(old_network.output.keys()))
# Maybe load existing model parameters.
elif last_model_hdf:
network.load_hdf(last_model_hdf)
last_model_hdf.close()
EngineUtil.maybe_subtract_priors(network, self.train_data, config)
self.network = network
if config.has('dump_json'):
self.network_dump_json(config.value('dump_json', ''))
self.print_network_info()
def test_enc_dec1_hdf(): filename = tempfile.mktemp(prefix="crnn-model-test") model = h5py.File(filename, "w") config = Config() config.load_file(StringIO(config_enc_dec1_json)) network_json = LayerNetwork.json_from_config(config) assert_true(network_json) network = LayerNetwork.from_json_and_config(network_json, config) assert_true(network) network.save_hdf(model, epoch=42) model.close() loaded_model = h5py.File(filename, "r") loaded_net = LayerNetwork.from_hdf_model_topology(loaded_model) assert_true(loaded_net) assert_equal(sorted(network.hidden.keys()), sorted(loaded_net.hidden.keys())) assert_equal(sorted(network.y.keys()), sorted(loaded_net.y.keys())) assert_equal(sorted(network.j.keys()), sorted(loaded_net.j.keys())) os.remove(filename)
def test_enc_dec1_hdf():
filename = tempfile.mktemp(prefix="crnn-model-test")
model = h5py.File(filename, "w")
config = Config()
config.load_file(StringIO(config_enc_dec1_json))
network_json = LayerNetwork.json_from_config(config)
assert_true(network_json)
network = LayerNetwork.from_json_and_config(network_json, config)
assert_true(network)
network.save_hdf(model, epoch=42)
model.close()
loaded_model = h5py.File(filename, "r")
loaded_net = LayerNetwork.from_hdf_model_topology(loaded_model)
assert_true(loaded_net)
assert_equal(sorted(network.hidden.keys()),
sorted(loaded_net.hidden.keys()))
assert_equal(sorted(network.y.keys()), sorted(loaded_net.y.keys()))
assert_equal(sorted(network.j.keys()), sorted(loaded_net.j.keys()))
os.remove(filename)
