def test_time_series():
image = gen_test.generate_test_image(hspy=True)
image2 = gen_test.generate_test_image(hspy=True)
images = [image, image2]
mask = gen_test.generate_test_image(hspy=False)
mask2 = gen_test.generate_test_image(hspy=False)
masks = [mask, mask2]
params = PAnalysis.parameters()
params.generate(store_im=True)
p_list = PAnalysis.ParticleAnalysisSeries(images, params)
t = PAnalysis.timeseriesanalysis(p_list)
nptest.assert_almost_equal(t['area'][:1][0], 20069.0)
def test_series():
image = gen_test.generate_test_image(hspy=True)
image2 = gen_test.generate_test_image(hspy=True)
images = [image, image2]
mask = gen_test.generate_test_image(hspy=False)
mask2 = gen_test.generate_test_image(hspy=False)
masks = [mask, mask2]
params = PAnalysis.parameters()
params.generate(store_im=True)
p_list = PAnalysis.ParticleAnalysisSeries(images, params)
p = p_list.list[0]
nptest.assert_almost_equal(p.properties['area']['value'], 20069.0)
assert p.properties['area']['units'] == 'nm^2'
nptest.assert_almost_equal(p.properties['circularity']['value'],
0.9095832157785668)
nptest.assert_allclose(p.mask, mask)
nptest.assert_allclose(p.image.data, image.data[16:184, 16:184])
nptest.assert_allclose(p.properties['x']['value'], 100.)
nptest.assert_allclose(p.properties['y']['value'], 100.)
assert p.properties['frame']['value'] == 0