def selectNone(self): """Clears the selection.""" widget = self.getWidget() it = QTreeWidgetItemIterator(widget, QTreeWidgetItemIterator.Checked) while it.value(): it.value().setCheckState(0, Qt.Unchecked) it += 1
def selectItems(self, itemType):
"""Select all items of a given ItemType."""
self.statusbar.showMessage("Selecting all {0}'s. "
"Please wait...".format(itemType))
items = []
itemsAll = []
index = self.stackedWidget.currentIndex()
if index == 0:
position = 0
items = [item[itemType] for item in self.strainInfo.values()]
for item in items:
if len(item):
itemsAll += item
else:
position = 3
for item in self.tableResults:
if item[2] == itemType:
itemsAll.append(item[3])
if not len(itemsAll):
self.statusbar.showMessage("No {0}'s in list".format(itemType), 5000)
return
self.selectNone()
widget = self.getWidget()
it = QTreeWidgetItemIterator(widget)
while it.value():
if it.value().text(position) in itemsAll:
it.value().setCheckState(0, Qt.Checked)
it += 1
self.statusbar.showMessage("Selected {0} {1}'s".format(len(itemsAll),
itemType), 3000)
def SaveConfig(self, CfgFileName):
" Saves parameter values into EVO file "
self.save()
if not str(CfgFileName).endswith(self.RunCfgFileName): # could be anything, as it is also called by a button
CfgFileName = self.NodeValue('ScenarioFileName')
CfgFileName = QFileDialog.getSaveFileName(None,QString('Write configuration to...'),
QString(CfgFileName), QString('*.evo'))
if CfgFileName == '': return False # user gives up
self.changed = False
NodeIterator = QTreeWidgetItemIterator(self)
ParamValues = []
Node = NodeIterator.value()
while Node:
#if not Node.isDisabled() and EvolParam.isInZ(str(Node.text(1))):
if not Node.isDisabled() and str(Node.text(1)):
ParamValues.append((Node.text(0),Node.text(1)))
NodeIterator += 1
Node = NodeIterator.value()
#ParamValues.append(('S_%s' % self.ScenarioName, 1))
#ParamValues.append(('S_%s' % str(self.NodeValue('ScenarioName')), 1))
ParamValues.sort()
CfgFile = open(CfgFileName,'w')
CfgFile.write('\n'.join(["%s\t%s" % P for P in ParamValues]))
CfgFile.close()
return True
def expandEditorTree(self, connectionItem):
iter = QTreeWidgetItemIterator(connectionItem)
val = iter.value()
while val:
val.setExpanded(True)
iter += 1
val = iter.value()
def whoosh_index(self):
it = QTreeWidgetItemIterator(
self.notesTree, QTreeWidgetItemIterator.All)
print("Starting complete indexing.")
#writer = self.ix.writer()
writer = AsyncWriter(self.ix)
while it.value():
treeItem = it.value()
name = self.notesTree.itemToPage(treeItem)
path = os.path.join(self.notesTree.pageToFile(name)).replace(os.sep, '/')
print(path)
fileobj = open(path, 'r', encoding='utf-8')
content = fileobj.read()
fileobj.close()
if METADATA_CHECKER.match(content) and 'meta' in self.settings.extensions:
no_metadata_content = METADATA_CHECKER.sub("", content, count=1).lstrip()
self.settings.md.reset().convert(content)
writer.update_document(
path=name, title=parseTitle(content, name), content=no_metadata_content,
tags=','.join(self.settings.md.Meta.get('tags', [])).strip())
else:
writer.add_document(path=name, title=parseTitle(content, name), content=content, tags='')
it += 1
writer.commit()
print("Finished completely reindexing.")
def setCurrentTreeItemByData(self, data):
it = QTreeWidgetItemIterator(self.ui.treeWidget)
while it.value():
if it.value().data(0, Qt.UserRole) == data:
self.ui.treeWidget.setCurrentItem(it.value())
return True
it += 1
return False
def setCurrentTreeItemByData(self, data):
it = QTreeWidgetItemIterator(self.ui.treeWidget)
while it.value():
if it.value().data(0, Qt.UserRole) == data:
self.ui.treeWidget.setCurrentItem(it.value())
return True
it += 1
return False
def findNode(self, NodeName): " finds a node in the tree " NodeIterator = QTreeWidgetItemIterator(self) Node = NodeIterator.value() while Node: if Node.text(0) == NodeName: return Node NodeIterator += 1 Node = NodeIterator.value() return None
def findNodesByAttribute(self, Attribute='Scenario'): " returns all nodes in the tree that have this attribute " NodeIterator = QTreeWidgetItemIterator(self) Node = NodeIterator.value() Found = dict() while Node: if str(Node.text(0)) in self.ParamScenario: Found[Node] = self.ParamScenario[str(Node.text(0))] NodeIterator += 1 Node = NodeIterator.value() return Found
def get_rules(self):
""" Returns a list of the checked off rules """
rules = []
iterator = QTreeWidgetItemIterator(self)
item = iterator.value()
while item:
if item.checkState(0) == Qt.Checked and item.rule:
rules.append(item.rule)
iterator += 1
item = iterator.value()
return rules
def check_all(self, check=True):
""" Checks or uncheck all
Args:
check: true if check, false if uncheck
"""
status = Qt.Checked if check else Qt.Unchecked
iterator = QTreeWidgetItemIterator(self)
item = iterator.value()
while item:
item.setCheckState(0, status)
iterator += 1
item = iterator.value()
def on_remove_testcase(self):
"""
slot function for remove test case button
:return:
"""
info = u'是否删除所选测试用例(已存储的用例文件请手动删除)!!!'
if QMessageBox.Yes == QMessageBox.question(self, u'询问', info, QMessageBox.Yes | QMessageBox.No, QMessageBox.Yes):
items = QTreeWidgetItemIterator(self.testcase_tree)
while items.value():
if items.value().checkState(0) == Qt.Checked:
self.test_cases.pop(str(items.value().text(0)))
self.testcase_tree.takeTopLevelItem(self.testcase_tree.indexOfTopLevelItem(items.value()))
continue
items += 1
def whoosh_index(self):
it = QTreeWidgetItemIterator(
self.notesTree, QTreeWidgetItemIterator.All)
writer = self.ix.writer()
while it.value():
treeItem = it.value()
name = self.notesTree.itemToPage(treeItem)
path = os.path.join(self.notesTree.pageToFile(name))
print(path)
fileobj = open(path, 'r')
content = fileobj.read()
fileobj.close()
writer.add_document(
path=name, title=parseTitle(content, name), content=content)
it += 1
writer.commit()
def ExportToHtml(self):
" Exports the tree structure (parameter definitions and documentation) to an HTML file "
HtmlStr= "<html>\n" # Html string that is used to store the tree structure
HtmlStr += '<h3><a href="http://www.dessalles.fr/Evolife">Goto Evolife documentation</a></h3>'
NodeIterator = QTreeWidgetItemIterator(self)
Node = NodeIterator.value()
while Node:
Ancestors = self.NodeAncestry(Node)
HtmlStr += "\n\n<h%d>%s%s</h%d>\n" % (len(Ancestors), ' ==> '.join(map(lambda x: str(x.text(0)),Ancestors)),
' --> ' * (str(Node.text(1))!='') + str(Node.text(1)),
len(Ancestors))
if str(Node.text(0)) in self.NodeDescriptions:
HtmlStr+= '<p style="color: blue; font-family: courier">%s</p>' % self.NodeDescriptions[str(Node.text(0))][2].strip()
NodeIterator += 1
Node = NodeIterator.value()
HtmlStr += '\n\n<h2></h2></html>'
HtmlTreeFileName = os.path.splitext(self.TreeFileName)[0]+ '.html'
CfgTreeFile = open(HtmlTreeFileName,'w')
CfgTreeFile.write(HtmlStr)
CfgTreeFile.close()
webbrowser.open('file:///' + os.path.abspath(HtmlTreeFileName))
def selectInBionumerics(self, on):
"""Selects Bionumerics entries with checked items from table view
(get all selected)
"""
actionGroup = QActionGroup(self)
actionGroup.addAction(self.actionViewTree)
actionGroup.addAction(self.refresh_action)
actionGroup.addAction(self.actionSelectAll)
actionGroup.addAction(self.actionSelectInvert)
actionGroup.addAction(self.actionSelectNone)
actionGroup.addAction(self.actionSelectDNA)
actionGroup.addAction(self.actionSelectFrozenStock)
if on:
actionGroup.setEnabled(False)
if not len(self.itemNames):
self.itemNames = bn.createIdMap()
it = QTreeWidgetItemIterator(self.selectedWidget,
QTreeWidgetItemIterator.Checked)
checkedItems = []
while it.value():
parentCode = unicode(it.value().text(4))
bnStrain = self.itemNames[int(parentCode)]
if bnStrain not in checkedItems:
checkedItems.append(bnStrain)
it += 1
if len(checkedItems):
bn.selectEntries(checkedItems)
else:
self.statusbar.showMessage("No items checked", 3000)
else:
actionGroup.setEnabled(True)
bn.selectEntries(self.selectedIds.values() + self.errorIds.keys())
def whoosh_index(self):
it = QTreeWidgetItemIterator(self.notesTree,
QTreeWidgetItemIterator.All)
print("Starting complete indexing.")
#writer = self.ix.writer()
writer = AsyncWriter(self.ix)
while it.value():
treeItem = it.value()
name = self.notesTree.itemToPage(treeItem)
path = os.path.join(self.notesTree.pageToFile(name)).replace(
os.sep, '/')
print(path)
fileobj = open(path, 'r', encoding='utf-8')
content = fileobj.read()
fileobj.close()
if METADATA_CHECKER.match(
content) and 'meta' in self.settings.extensions:
no_metadata_content = METADATA_CHECKER.sub("",
content,
count=1).lstrip()
self.settings.md.reset().convert(content)
writer.update_document(
path=name,
title=parseTitle(content, name),
content=no_metadata_content,
tags=','.join(self.settings.md.Meta.get('tags',
[])).strip())
else:
writer.add_document(path=name,
title=parseTitle(content, name),
content=content,
tags='')
it += 1
writer.commit()
print("Finished completely reindexing.")
def selectAll(self):
"""All items are selected (checked)."""
index = self.stackedWidget.currentIndex()
widget = self.getWidget()
it = QTreeWidgetItemIterator(widget, QTreeWidgetItemIterator.NotChecked)
count = 0
if index == 0:
while it.value():
if it.value().parent():
it.value().setCheckState(0, Qt.Checked)
count += 1
it += 1
elif index == 1:
while it.value():
it.value().setCheckState(0, Qt.Checked)
count += 1
it += 1
if count:
self.statusbar.showMessage("Selected {0} items".format(count), 3000)
def showSettingsDialog(self):
self.setupDialog()
result = self.dialog.exec_()
self.storageFilename = str(self.ui.pathText.text())
allGood = False
if result == QDialog.Accepted:
allGood = True
i = 0
it = QTreeWidgetItemIterator(self.ui.particlesTree)
newParticles = Particles(self.ui.particlesTree.topLevelItemCount())
while it.value() is not None:
posX, pXGood = it.value().data(0, Qt.DisplayRole).toFloat()
posY, pYGood = it.value().data(1, Qt.DisplayRole).toFloat()
posZ, pZGood = it.value().data(2, Qt.DisplayRole).toFloat()
posUnit = str(it.value().data(3, Qt.DisplayRole).toString())
try:
eval(posUnit)
posUnitGood = True
except:
posUnitGood = False
velX, vXGood = it.value().data(4, Qt.DisplayRole).toFloat()
velY, vYGood = it.value().data(5, Qt.DisplayRole).toFloat()
velZ, vZGood = it.value().data(6, Qt.DisplayRole).toFloat()
velUnit = str(it.value().data(7, Qt.DisplayRole).toString())
try:
eval(velUnit)
velUnitGood = True
except:
velUnitGood = False
mass, massGood = it.value().data(8, Qt.DisplayRole).toFloat()
massUnit = str(it.value().data(9, Qt.DisplayRole).toString())
try:
eval(massUnit)
massUnitGood = True
except:
massUnitGood = False
radius, radiusGood = it.value().data(10, Qt.DisplayRole).toFloat()
radiusUnit = str(it.value().data(11, Qt.DisplayRole).toString())
radiusUnitGood = (radiusUnit in units.__dict__)
checks = (pXGood, pYGood, pZGood, posUnitGood, vXGood, vYGood,
vZGood, velUnitGood, massGood, massUnitGood)
allGood = reduce(lambda x,y: x and y, checks, allGood)
if allGood:
newParticles[i].position = [posX, posY, posZ] | eval(posUnit)
newParticles[i].velocity = [velX, velY, velZ] | eval(velUnit)
newParticles[i].mass = mass | eval(massUnit)
newParticles[i].radius = radius | eval(radiusUnit)
it += 1
i += 1
if(allGood):
del self.particles
self.particles = newParticles
self.positionUnit = posUnit
self.massUnit = massUnit
self.radiusUnit = radiusUnit
self.velUnit = velUnit
self.numParticles = len(self.particles)
self.ui.particlesTree.clear()
def __init__(self, *args):
QTreeWidgetItemIterator.__init__(self, *args)
def selectInvert(self): """Inverts the selection.""" index = self.stackedWidget.currentIndex() widget = self.getWidget() it = QTreeWidgetItemIterator(widget) if index == 0: while it.value(): if it.value().parent(): if it.value().checkState(0) == Qt.Checked: it.value().setCheckState(0, Qt.Unchecked) else: it.value().setCheckState(0, Qt.Checked) it += 1 else: while it.value(): if it.value().checkState(0) == Qt.Checked: it.value().setCheckState(0, Qt.Unchecked) else: it.value().setCheckState(0, Qt.Checked) it += 1
def __init__(self, *args):
QTreeWidgetItemIterator.__init__(self, *args)
def updateSelection(self):
"""Updates selection status in ItemTracker."""
if self.actionSelectInBionumerics.isChecked():
self.selectInBionumerics(False)
self.actionSelectInBionumerics.setChecked(False)
self.updateButton.setEnabled(False)
self.statusbar.showMessage("Updating selection. Please wait...")
if self.selectRadioButton.isChecked():
selectedAction = "SELECT"
elif self.deselectRadioButton.isChecked():
selectedAction = "DESELECT"
checkedItems = {}
updatedItems = []
failedItems = []
index = self.stackedWidget.currentIndex()
widget = self.getWidget()
it = QTreeWidgetItemIterator(widget, QTreeWidgetItemIterator.Checked)
if index == 0:
while it.value():
itemName = unicode(it.value().text(0))
itemId = self.itemIds[itemName]
checkedItems[itemName] = itemId
parentItem = self.getParent(it.value())
strain = unicode(parentItem.text(0))
if strain not in self.updatedStrains:
self.updatedStrains.append(strain)
it += 1
elif index == 1:
if not len(self.itemNames):
self.itemNames = bn.createIdMap()
while it.value():
itemId = unicode(it.value().text(0))
itemName = unicode(it.value().text(3))
checkedItems[itemName] = int(itemId)
parentCode = unicode(it.value().text(4))
strain = self.itemNames[int(parentCode)]
if strain not in self.updatedStrains:
self.updatedStrains.append(strain)
it += 1
if not len(checkedItems):
self.statusbar.showMessage("No items checked", 5000)
self.updateButton.setEnabled(True)
return
for itemName, itemId in checkedItems.iteritems():
if selectedAction == "SELECT":
result = lims.SelectItem(itemId)
elif selectedAction == "DESELECT":
result = lims.UnselectItem(itemId)
if not len(result):
updatedItems.append(itemName)
else:
failedItems.append(itemName)
if len(updatedItems):
self.mkSuccess("{0}ED {1} items".format(selectedAction,
len(updatedItems)))
self.logBrowser.append("{0}".format(", ".join(updatedItems)))
self.logger.info("{0}\t{1}".format(selectedAction, ", ".join(updatedItems)))
if len(failedItems):
self.mkError("{0} failed for {1} items".format(selectedAction,
len(failedItems)))
self.logBrowser.append("{0}".format(", ".join(failedItems)))
self.logger.info("{0}\t{1}".format(selectedAction,
", ".join(failedItems)))
self.updateButton.setEnabled(True)
if len(updatedItems) or len(failedItems):
self.populatedTree = False
self.populatedTable = False
self.refresh()
def passTerminBtn(self):
if int(self.terminsTreeWidget.currentItem().text(2)) == int(
self.terminsPerPageComboBos.currentText()):
self.show_termins_in_list(self.currentPage + 1)
it = QTreeWidgetItemIterator(self.terminsTreeWidget)
it.value()
it += 1
self.terminsTreeWidget.setCurrentItem(it.value())
it.value().setSelected(True)
return
it = QTreeWidgetItemIterator(self.terminsTreeWidget)
i = 0
while it.value():
if i == int(self.terminsTreeWidget.currentItem().text(2)):
it += 1
self.terminsTreeWidget.setCurrentItem(it.value())
it.value().setSelected(True)
return
it += 1
i += 1
def go_to_termin_on_position(self, position):
print(position)
if position == int(self.terminsPerPageComboBos.currentText()):
self.show_termins_in_list(self.currentPage + 1)
it = QTreeWidgetItemIterator(self.terminsTreeWidget)
it.value()
it += 1
self.terminsTreeWidget.setCurrentItem(it.value())
it.value().setSelected(True)
return
it = QTreeWidgetItemIterator(self.terminsTreeWidget)
i = 0
while it.value():
if i == position:
if self.showLinkedCheck.isChecked():
it += 1
self.terminsTreeWidget.setCurrentItem(it.value())
it.value().setSelected(True)
return
it += 1
i += 1
