def test_Jobs_getDockerComputeDomains(self):
dockerComputeDomains = Jobs.getDockerComputeDomains()
self.assertTrue(dockerComputeDomains.__len__() > 0)
found = False
for dockerComputeDomain in dockerComputeDomains:
if dockerComputeDomain.get('name') == Jobs_DockerComputeDomainName:
found = True
self.assertTrue(found)
def get_job_environment(token, USERNAME):
DOMAIN = 'COVID-19 Jobs' #hardcoded for now
IMAGE = 'SciServer Essentials' #hardcoded for now
# define lists of user and data volumes that should be mounted
USERVOLUMES = [
'Storage/' + USERNAME + '/persistent',
'Temporary/' + USERNAME + '/scratch'
]
DATAVOLUMES = ['COVID-19']
RESULTSFOLDERPATH = "/home/idies/workspace/Temporary/" + USERNAME + "/scratch/jobs"
domains = Jobs.getDockerComputeDomains()
domain = None
image = None
volumes = []
userVolumes = []
dataVolumes = []
for d in domains:
if d['name'] == DOMAIN:
domain = d
for im in d['images']:
if im['name'] == IMAGE:
image = im
for v in d['volumes']:
if v['name'] in DATAVOLUMES:
dataVolumes.append({
"name": v['name'],
'needsWriteAccess': True
})
for uv in d['userVolumes']:
path = pathForUserVolume(uv)
if path in USERVOLUMES:
userVolumes.append({
'name': uv['name'],
'rootVolumeName': uv['rootVolumeName'],
'owner': uv['owner'],
'needsWriteAccess': True
})
break
return (IMAGE, domain, userVolumes, dataVolumes, RESULTSFOLDERPATH)
Jobs_UserVolumes = [{'name':'persistent'},{'name':'scratch', 'needsWriteAccess':True}]
Jobs_DataVolumes = [{'name':'SDSS_DAS'}]
Jobs_Parameters = 'param1=1\nparam2=2\nparam3=3'
Jobs_Alias = 'MyNewJob'
Jobs_SqlQuery = "select 1;"
Jobs_RBBComputeDomainName = 'Manga (long)'
Jobs_DatabaseContextName = "manga"
Jobs_QueryResultsFile = 'myQueryResults'
# In[ ]:
# get docker compute domains
dockerComputeDomains = Jobs.getDockerComputeDomains();
print(dockerComputeDomains)
# In[ ]:
# get names of docker compute domains available to the user
dockerComputeDomainsNames = Jobs.getDockerComputeDomainsNames()
print(dockerComputeDomainsNames)
# In[ ]:
# get docker compute domain from name