def main(input_str=None):
args_commd = parse_command_line(input_str)
if args_commd.path is None:
curloc = Path(__file__).resolve()
testpath = curloc.parent.parent/'Testdata'/'Barker'
else:
testpath = Path(args_commd.path)
origparamsdir = testpath/'Origparams'
testpath.mkdir(exist_ok=True,parents=True)
print("Making a path for testdata at {}".format(testpath))
origparamsdir.mkdir(exist_ok=True,parents=True)
print("Making a path for testdata at {}".format(origparamsdir))
makeconfigfilebarker(testpath)
if args_commd.makeorigdata:
Icont1 = MakeTestIonoclass(testv=True,testtemp=False,N_0=1e12,z_0=150.0,H_0=50.0)
makeinputh5(Icont1,str(testpath))
Icont1.saveh5(str(origparamsdir.joinpath('0 testiono.h5')))
funcnamelist = args_commd.funclist
failflag=runsim.main(funcnamelist,testpath,str(testpath.joinpath('barkertest.yml')),True)
if not failflag:
analysisdump(testpath,testpath.joinpath('barkertest.yml'))
def main():
"""This function will run the test simulation buy first making a simple set of
ionospheric parameters based off of a Chapman function. Then it will create configuration
and start files followed by running the simulation."""
curpath = Path(__file__).resolve().parent
testpath = curpath.parent/'Testdata'/'Long_Pulse'
origparamsdir = testpath/'Origparams'
if not testpath.is_dir():
testpath.mkdir(parents=True)
print("Making a path for testdata at {}".format(str(testpath)))
if not origparamsdir.is_dir():
origparamsdir.mkdir(parents=True)
print("Making a path for testdata at {}".format(origparamsdir))
# clear everything out
folderlist = ['Origparams','Spectrums','Radardata','ACF','Fitted']
for ifl in folderlist:
flist = (testpath/ifl).glob('*.h5')
for ifile in flist:
ifile.unlink()
# Now make stuff again
configsetup(testpath)
Icont1 = MakeTestIonoclass(testv=True,testtemp=True)
makeinputh5(MakeTestIonoclass(testv=True,testtemp=False),testpath)
Icont1.saveh5(origparamsdir/'0 testiono.h5')
funcnamelist=['spectrums','radardata','fitting']
failflag = runsim.main(funcnamelist,testpath, testpath/'PFISRExample.ini',True)
if not failflag:
analysisdump(testpath,str(testpath/'PFISRExample.ini'))
def main():
"""This function will run the test simulation buy first making a simple set of
ionospheric parameters based off of a Chapman function. Then it will create configuration
and start files followed by running the simulation."""
curpath = Path(__file__).resolve().parent
testpath = curpath.parent / "Testdata" / "Long_Pulse"
origparamsdir = testpath / "Origparams"
if not testpath.is_dir():
testpath.mkdir(parents=True)
print("Making a path for testdata at {}".format(str(testpath)))
if not origparamsdir.is_dir():
origparamsdir.mkdir(parents=True)
print("Making a path for testdata at {}".format(origparamsdir))
# clear everything out
folderlist = ["Origparams", "Spectrums", "Radardata", "ACF", "Fitted"]
for ifl in folderlist:
flist = (testpath / ifl).glob("*.h5")
for ifile in flist:
ifile.unlink()
# Now make stuff again
configsetup(testpath)
Icont1 = MakeTestIonoclass(testv=True, testtemp=True)
makeinputh5(MakeTestIonoclass(testv=True, testtemp=False), testpath)
Icont1.saveh5(origparamsdir / "0 testiono.h5")
funcnamelist = ["spectrums", "radardata", "fitting"]
failflag = runsim.main(funcnamelist, testpath, testpath / "PFISRExample.ini", True)
if not failflag:
analysisdump(testpath, str(testpath / "PFISRExample.ini"))
def main(input_str=None):
args_commd = parse_command_line(input_str)
if args_commd.path is None:
curloc = Path(__file__).resolve()
testpath = curloc.parent.parent / 'Testdata' / 'Barker'
else:
testpath = Path(args_commd.path)
origparamsdir = testpath / 'Origparams'
testpath.mkdir(exist_ok=True, parents=True)
print("Making a path for testdata at {}".format(testpath))
origparamsdir.mkdir(exist_ok=True, parents=True)
print("Making a path for testdata at {}".format(origparamsdir))
makeconfigfilebarker(testpath)
if args_commd.makeorigdata:
Icont1 = MakeTestIonoclass(testv=True,
testtemp=False,
N_0=1e12,
z_0=150.0,
H_0=50.0)
makeinputh5(Icont1, str(testpath))
Icont1.saveh5(str(origparamsdir.joinpath('0 testiono.h5')))
funcnamelist = args_commd.funclist
failflag = runsim.main(funcnamelist, testpath,
str(testpath.joinpath('barkertest.yml')), True)
if not failflag:
analysisdump(testpath, testpath.joinpath('barkertest.yml'))
def main():
curloc = Path(__file__).resolve()
testpath = curloc.parent.parent / 'Testdata' / 'Barker'
origparamsdir = testpath / 'Origparams'
pdb.set_trace()
testpath.mkdir(exist_ok=True, parents=True)
print("Making a path for testdata at {}".format(testpath))
origparamsdir.mkdir(exist_ok=True, parents=True)
print("Making a path for testdata at {}".format(origparamsdir))
makeconfigfilebarker(testpath)
Icont1 = MakeTestIonoclass(testv=True,
testtemp=False,
N_0=1e12,
z_0=150.0,
H_0=50.0)
makeinputh5(Icont1, str(testpath))
Icont1.saveh5(str(origparamsdir.joinpath('0 testiono.h5')))
funcnamelist = ['spectrums', 'radardata', 'fitting']
failflag = runsim.main(funcnamelist, testpath,
str(testpath.joinpath('barkertest.ini')), True)
if not failflag:
analysisdump(testpath, testpath.joinpath('barkertest.ini'))
def main():
curpath = Path(__file__).resolve().parents[1]
print(curpath)
testpath = curpath/'Testdata'/'MatrixTest'
origparamsdir = testpath/'Origparams'
testpath.mkdir(exist_ok=True,parents=True)
origparamsdir.mkdir(exist_ok=True,parents=True)
# clear everything out
folderlist = ['Origparams','Spectrums','Radardata','ACF','Fitted']
for ifl in folderlist:
flist = (testpath/ifl).glob('*.h5')
for ifile in flist:
ifile.unlink()
# Make Config file
configname = testpath/'config.ini'
if not configname.is_file():
srcfile = curpath/'SimISR'/'default.ini'
shutil.copy(str(srcfile),str(configname))
# make the coordinates
xvec = sp.zeros((1))
yvec = sp.zeros((1))
zvec = sp.arange(50.0,900.0,2.0)
# Mesh grid is set up in this way to allow for use in MATLAB with a simple reshape command
xx,zz,yy = sp.meshgrid(xvec,zvec,yvec)
coords = sp.zeros((xx.size,3))
coords[:,0] = xx.flatten()
coords[:,1] = yy.flatten()
coords[:,2] = zz.flatten()
Z_0 = 250.
H_0=30.
N_0=6.5e11
Icont1 = MakeTestIonoclass(testv=True,testtemp=True,N_0=N_0,z_0=Z_0,H_0=H_0,coords=coords)
Icont1.saveh5(origparamsdir/'0 testiono.h5')
Icont1.saveh5(testpath/'startdata.h5')
funcnamelist=['spectrums','applymat','fittingmat']
runsim.main(funcnamelist,testpath,configname,True)
plotdir = testpath/'AnalysisPlots'
plotdir.mkdir(exist_ok=True,parents=True)
f_templ = str(plotdir/'params')
plotbeamparametersv2([0.],str(configname),str(testpath),fitdir = 'FittedMat',params=['Ne','Ti','Te'],filetemplate=f_templ,
suptitle = 'With Mat',werrors=False,nelog=False)
def main(funcnamelist):
"""This function will run the test simulation buy first making a simple set of
ionospheric parameters based off of a Chapman function. Then it will create configuration
and start files followed by running the simulation."""
curpath = Path(__file__).resolve().parent
testpath = curpath / 'Testdata' / 'DishMode'
origparamsdir = testpath / 'Origparams'
testpath.mkdir(exist_ok=True, parents=True)
origparamsdir.mkdir(exist_ok=True, parents=True)
if 'configupdate' in funcnamelist:
configsetup(testpath)
funcnamelist.remove('configupdate')
# clear everything out
folddict = {
'origdata': ['Origparams'],
'spectrums': ['Spectrums'],
'radardata': ['ACF', 'Radardata'],
'fitting': ['Fitted']
}
folderlist = []
for i in funcnamelist:
folderlist = folderlist + folddict[i]
# folderlist = ['Origparams','Spectrums','Radardata','ACF','Fitted']
for ifl in folderlist:
flist = (testpath / ifl).glob('*.h5')
for ifile in flist:
ifile.unlink()
# Now make stuff again
if 'origdata' in funcnamelist:
Icont1 = MakeTestIonoclass(testv=True, testtemp=True)
makeinputh5(MakeTestIonoclass(testv=True, testtemp=False), testpath)
Icont1.saveh5(origparamsdir / '0 testiono.h5')
funcnamelist.remove('origdata')
# funcnamelist=['spectrums','radardata','fitting']
failflag = runsim.main(funcnamelist, testpath,
testpath / 'DishExample.ini', True)
if not failflag:
analysisdump(testpath, testpath / 'DishExample.ini')
def main():
curloc = Path(__file__).resolve()
testpath = curloc.parent.parent/'Testdata'/'Barker'
origparamsdir = testpath/'Origparams'
pdb.set_trace()
testpath.mkdir(exist_ok=True,parents=True)
print("Making a path for testdata at {}".format(testpath))
origparamsdir.mkdir(exist_ok=True,parents=True)
print("Making a path for testdata at {}".format(origparamsdir))
makeconfigfilebarker(testpath)
Icont1 = MakeTestIonoclass(testv=True,testtemp=False,N_0=1e12,z_0=150.0,H_0=50.0)
makeinputh5(Icont1,str(testpath))
Icont1.saveh5(str(origparamsdir.joinpath('0 testiono.h5')))
funcnamelist=['spectrums','radardata','fitting']
failflag=runsim.main(funcnamelist,testpath,str(testpath.joinpath('barkertest.ini')),True)
if not failflag:
analysisdump(testpath,testpath.joinpath('barkertest.ini'))
def main(funcnamelist):
"""This function will run the test simulation buy first making a simple set of
ionospheric parameters based off of a Chapman function. Then it will create configuration
and start files followed by running the simulation."""
curpath = Path(__file__).resolve().parent
testpath = curpath/'Testdata'/'DishMode'
origparamsdir = testpath/'Origparams'
testpath.mkdir(exist_ok=True,parents=True)
origparamsdir.mkdir(exist_ok=True,parents=True)
if 'configupdate' in funcnamelist:
configsetup(testpath)
funcnamelist.remove('configupdate')
# clear everything out
folddict = {'origdata':['Origparams'], 'spectrums':['Spectrums'], 'radardata':['ACF','Radardata'], 'fitting':['Fitted']}
folderlist = []
for i in funcnamelist:
folderlist=folderlist+folddict[i]
# folderlist = ['Origparams','Spectrums','Radardata','ACF','Fitted']
for ifl in folderlist:
flist = (testpath/ifl).glob('*.h5')
for ifile in flist:
ifile.unlink()
# Now make stuff again
if 'origdata' in funcnamelist:
Icont1 = MakeTestIonoclass(testv=True,testtemp=True)
makeinputh5(MakeTestIonoclass(testv=True,testtemp=False),testpath)
Icont1.saveh5(origparamsdir/'0 testiono.h5')
funcnamelist.remove('origdata')
# funcnamelist=['spectrums','radardata','fitting']
failflag=runsim.main(funcnamelist,testpath,testpath/'DishExample.ini',True)
if not failflag:
analysisdump(testpath,testpath/'DishExample.ini')
def makeline(testdir,meanaz,linewidth=1,multval = 5.,start = 450.,rng_vel = -0.5):
"""This will create one of the plane datasets given the desired azmuth location
and line width in samples. The line will be an enhancement in electron density
Inputs:
testdir - directory that will house the simulation data.
meanaz - the Azimuth angle the data will lie on in degrees.
linewidth - The width of the enhancement in samples
multval - The enhancement's multiplicaive value compared to the background.
start - The start location of the enhancement. In km from radar.
rng_vel - The velocity of the enhancement - is toward the radar in km/s
"""
if not os.path.isdir(testdir):
os.mkdir(testdir)
datadir = os.path.join(testdir,'Origparams')
if not os.path.isdir(datadir):
os.mkdir(datadir)
# (sensdict,simparams) = readconfigfile(configfile)
# azangles = [iang[0] for iang in simparams['angles']]
# meanaz = sp.mean(azangles)
rngart = 10
rngend = 700
nr = sp.floor((rngend-rngart)/2)
nz = 350
nt = 31
d2r = sp.pi/180.
rvec = sp.linspace(rngart,rngend,nr+1)
zvec = sp.linspace(0,2.*nz,nz+1)
Rmat,Zmat = sp.meshgrid(rvec,zvec)
Xmat = Rmat*sp.sin(d2r*meanaz)
Ymat = Rmat*sp.cos(d2r*meanaz)
coords = sp.column_stack((Xmat.flatten(),Ymat.flatten(),Zmat.flatten()))
if rng_vel==0.:
timevec = sp.array([0.])
else:
timevec = sp.linspace(0.,900.,nt)
xvel = rng_vel*sp.sin(d2r*meanaz)*1e3
yvel = rng_vel*sp.cos(d2r*meanaz)*1e3
parammult = sp.ones_like(Rmat).astype('float64')
paramadd =sp.zeros_like(Rmat).astype('float64')
# start file
it=0.
Icont1 = MakeTestIonoclass(testv=False,testtemp=False,N_0=1e11,z_0=250.0,H_0=50.0,
coords=coords,times=sp.array([[it,it+30.]]))
strtstr = 'startdata{0}.h5'.format(str(meanaz).replace('.','_',1))
strtfile = os.path.join(os.path.split(testdir)[0],strtstr)
if not os.path.isfile(strtfile):
Icont1.saveh5(strtfile)
if sp.mod(linewidth,2):
linewidth+=1
fwhm = sp.floor(linewidth/2.)
for itn,it in enumerate(timevec):
Icont1 = MakeTestIonoclass(testv=False,testtemp=False,N_0=1e11,z_0=250.0,H_0=50.0,
coords=coords,times=sp.array([[it,it+30.]]))
midloc = sp.argmin(sp.absolute(rvec-(start+rng_vel*it)))
iloc = sp.arange(midloc-fwhm,midloc+1+fwhm).astype(sp.int64)
parammult[:,iloc] = multval
Paramflt = parammult.flatten()
Icont1.Param_List[:,0,0,0] = Icont1.Param_List[:,0,0,0]*Paramflt#ion density enhancement
Icont1.Param_List[:,0,1,0] = Icont1.Param_List[:,0,1,0]*Paramflt# electron density enhancement
paramadd[:,iloc] = xvel
Icont1.Velocity[:,0,0] = paramadd.flatten()
paramadd[:,iloc] = yvel
Icont1.Velocity[:,0,1] = paramadd.flatten()
paramadd[:,iloc]=0.
parammult[:,iloc] = 1.
Icont1.saveh5(os.path.join(datadir,'{0} planeiono.h5'.format(int(it)) ))
def main():
curpath = Path(__file__).resolve().parents[1]
print(curpath)
testpath = curpath / 'Testdata' / 'MatrixTest'
origparamsdir = testpath / 'Origparams'
testpath.mkdir(exist_ok=True, parents=True)
origparamsdir.mkdir(exist_ok=True, parents=True)
# clear everything out
folderlist = ['Origparams', 'Spectrums', 'Radardata', 'ACF', 'Fitted']
for ifl in folderlist:
flist = (testpath / ifl).glob('*.h5')
for ifile in flist:
ifile.unlink()
# Make Config file
configname = testpath / 'config.ini'
if not configname.is_file():
srcfile = curpath / 'SimISR' / 'default.ini'
shutil.copy(str(srcfile), str(configname))
# make the coordinates
xvec = sp.zeros((1))
yvec = sp.zeros((1))
zvec = sp.arange(50.0, 900.0, 2.0)
# Mesh grid is set up in this way to allow for use in MATLAB with a simple reshape command
xx, zz, yy = sp.meshgrid(xvec, zvec, yvec)
coords = sp.zeros((xx.size, 3))
coords[:, 0] = xx.flatten()
coords[:, 1] = yy.flatten()
coords[:, 2] = zz.flatten()
Z_0 = 250.
H_0 = 30.
N_0 = 6.5e11
Icont1 = MakeTestIonoclass(testv=True,
testtemp=True,
N_0=N_0,
z_0=Z_0,
H_0=H_0,
coords=coords)
Icont1.saveh5(origparamsdir / '0 testiono.h5')
Icont1.saveh5(testpath / 'startdata.h5')
funcnamelist = ['spectrums', 'applymat', 'fittingmat']
runsim.main(funcnamelist, testpath, configname, True)
plotdir = testpath / 'AnalysisPlots'
plotdir.mkdir(exist_ok=True, parents=True)
f_templ = str(plotdir / 'params')
plotbeamparametersv2([0.],
str(configname),
str(testpath),
fitdir='FittedMat',
params=['Ne', 'Ti', 'Te'],
filetemplate=f_templ,
suptitle='With Mat',
werrors=False,
nelog=False)