예제 #1
0
def geneprobelistmatch(gene,probelist):
    if 'Yeast6kArray' not in dir(): from TAMO.DataSources import Yeast6kArray
    s_orf = SGD.gene2orf(gene)
    orfs = []
    for probe in probelist:
        orfs.extend(Yeast6kArray.probe2orfs(probe))
    #print "%4d --> %4d   "%(len(probelist),len(orfs)),
    return orforflistmatch(s_orf,orfs)
예제 #2
0
def gene2annotations(gene):  return annotations(SGD.gene2orf(gene))

# List annotations for an ORF
def annotations(orf):