def testSetDataModelInput(self):
"""
"""
edPluginBest = self.createPlugin()
xsPluginItemGood01 = self.getPluginConfiguration(os.path.join(self.strDataPath, "XSConfiguration.xml"))
edPluginBest.setConfiguration(xsPluginItemGood01)
edPluginBest.setScriptExecutable("cat")
edPluginBest.configure()
from XSDataBestv1_1 import XSDataInputBest
xsDataInputBest = XSDataInputBest()
from XSDataCommon import XSDataAbsorbedDoseRate
from XSDataCommon import XSDataDouble
from XSDataCommon import XSDataTime
from XSDataCommon import XSDataSpeed
from XSDataCommon import XSDataString
from XSDataCommon import XSDataAngle
from XSDataCommon import XSDataBoolean
xsDataInputBest.setCrystalAbsorbedDoseRate(XSDataAbsorbedDoseRate(0.22e06))
xsDataInputBest.setCrystalShape(XSDataDouble(1))
xsDataInputBest.setCrystalSusceptibility(XSDataDouble(1.5))
xsDataInputBest.setDetectorType(XSDataString("q210-2x"))
xsDataInputBest.setBeamExposureTime(XSDataTime(1))
xsDataInputBest.setBeamMaxExposureTime(XSDataTime(10000))
xsDataInputBest.setBeamMinExposureTime(XSDataTime(0.1))
xsDataInputBest.setGoniostatMinRotationWidth(XSDataAngle(0.1))
xsDataInputBest.setGoniostatMaxRotationSpeed(XSDataSpeed(10))
xsDataInputBest.setAimedResolution(XSDataDouble(2))
xsDataInputBest.setAimedRedundancy(XSDataDouble(6.5))
xsDataInputBest.setAimedCompleteness(XSDataDouble(0.9))
xsDataInputBest.setAimedIOverSigma(XSDataDouble(3))
xsDataInputBest.setComplexity(XSDataString("min"))
xsDataInputBest.setAnomalousData(XSDataBoolean(True))
bestFileContentDat = EDUtilsFile.readFile(os.path.join(self.strDataPath, "bestfile.dat"))
xsDataInputBest.setBestFileContentDat(XSDataString(bestFileContentDat))
bestFileContentPar = EDUtilsFile.readFile(os.path.join(self.strDataPath, "bestfile.par"))
xsDataInputBest.setBestFileContentPar(XSDataString(bestFileContentPar))
bestFileContentHKL = EDUtilsFile.readFile(os.path.join(self.strDataPath, "bestfile1.hkl"))
listBestFileContentHKL = []
listBestFileContentHKL.append(XSDataString(bestFileContentHKL))
xsDataInputBest.setBestFileContentHKL(listBestFileContentHKL)
xsDataInputBest.outputFile(self.strObtainedInputFile)
strExpectedInput = self.readAndParseFile(self.strReferenceInputFile)
strObtainedInput = self.readAndParseFile(self.strObtainedInputFile)
xsDataInputExpected = XSDataInputBest.parseString(strExpectedInput)
xsDataInputObtained = XSDataInputBest.parseString(strObtainedInput)
EDAssert.equal(xsDataInputExpected.marshal(), xsDataInputObtained.marshal())
os.remove(self.strObtainedInputFile)
self.cleanUp(edPluginBest)
def testGenerateExecutiveSummary(self):
strInputBest = self.readAndParseFile(self.strReferenceInputFile)
strResultBest = self.readAndParseFile(self.strReferenceResultFile)
from XSDataBestv1_1 import XSDataInputBest
from XSDataBestv1_1 import XSDataResultBest
xsDataInputBest = XSDataInputBest.parseString(strInputBest)
xsDataResultBest = XSDataResultBest.parseString(strResultBest)
edPluginBest = self.createPlugin()
edPluginBest.setDataInput(xsDataInputBest)
edPluginBest.setDataOutput(xsDataResultBest)
edPluginBest.generateExecutiveSummary(edPluginBest)
def testGenerateExecutiveSummary(self):
strInputBest = self.readAndParseFile(self.strReferenceInputFile)
strResultBest = self.readAndParseFile(self.strReferenceResultFile)
from XSDataBestv1_1 import XSDataInputBest
from XSDataBestv1_1 import XSDataResultBest
xsDataInputBest = XSDataInputBest.parseString(strInputBest)
xsDataResultBest = XSDataResultBest.parseString(strResultBest)
edPluginBest = self.createPlugin()
edPluginBest.setDataInput(xsDataInputBest)
edPluginBest.setDataOutput(xsDataResultBest)
edPluginBest.generateExecutiveSummary(edPluginBest)
def setDataInput( self, _dataInput ):
"""
Sets the Plugin Input Data
_dataInput could be either an String XML or an XSData
The XML String should be parsed as an Output Object by the final Plugin
"""
self.DEBUG( "EDPluginSTACv10Alignment.setDataInput" )
# Check the type
if( isinstance( _dataInput, EDString ) ):
self.DEBUG( "EDPluginSTACv10.setDataInput: Input Data is of EDString " )
self.m_xsDataInput = XSDataInputBest.parseString( _dataInput )
elif ( isinstance( _dataInput, XSDataInputBest ) ):
self.m_xsDataInput = _dataInput
else:
errorMessage = EDMessage.ERROR_WRONG_DATA_TYPE_02 % ('EDPluginSTACv10.setDataInput', "XMLString or XSDataBestv01Input expected" )
self.error( errorMessage )
self.addErrorMessage( errorMessage )
raise RuntimeError, errorMessage
def setDataInput(self, _dataInput):
"""
Sets the Plugin Input Data
_dataInput could be either an String XML or an XSData
The XML String should be parsed as an Output Object by the final Plugin
"""
self.DEBUG("EDPluginSTACv10Alignment.setDataInput")
# Check the type
if (isinstance(_dataInput, EDString)):
self.DEBUG(
"EDPluginSTACv10.setDataInput: Input Data is of EDString ")
self.m_xsDataInput = XSDataInputBest.parseString(_dataInput)
elif (isinstance(_dataInput, XSDataInputBest)):
self.m_xsDataInput = _dataInput
else:
errorMessage = EDMessage.ERROR_WRONG_DATA_TYPE_02 % (
'EDPluginSTACv10.setDataInput',
"XMLString or XSDataBestv01Input expected")
self.error(errorMessage)
self.addErrorMessage(errorMessage)
raise RuntimeError, errorMessage
def testSetDataModelInput(self):
"""
"""
edPluginBest = self.createPlugin()
xsPluginItemGood01 = self.getPluginConfiguration(
os.path.join(self.strDataPath, "XSConfiguration.xml"))
edPluginBest.setConfiguration(xsPluginItemGood01)
edPluginBest.setScriptExecutable("cat")
edPluginBest.configure()
from XSDataBestv1_1 import XSDataInputBest
xsDataInputBest = XSDataInputBest()
from XSDataCommon import XSDataAbsorbedDoseRate
from XSDataCommon import XSDataDouble
from XSDataCommon import XSDataTime
from XSDataCommon import XSDataSpeed
from XSDataCommon import XSDataString
from XSDataCommon import XSDataAngle
from XSDataCommon import XSDataBoolean
xsDataInputBest.setCrystalAbsorbedDoseRate(
XSDataAbsorbedDoseRate(0.22E+06))
xsDataInputBest.setCrystalShape(XSDataDouble(1))
xsDataInputBest.setCrystalSusceptibility(XSDataDouble(1.5))
xsDataInputBest.setDetectorType(XSDataString("q210-2x"))
xsDataInputBest.setBeamExposureTime(XSDataTime(1))
xsDataInputBest.setBeamMaxExposureTime(XSDataTime(10000))
xsDataInputBest.setBeamMinExposureTime(XSDataTime(0.1))
xsDataInputBest.setGoniostatMinRotationWidth(XSDataAngle(0.1))
xsDataInputBest.setGoniostatMaxRotationSpeed(XSDataSpeed(10))
xsDataInputBest.setAimedResolution(XSDataDouble(2))
xsDataInputBest.setAimedRedundancy(XSDataDouble(6.5))
xsDataInputBest.setAimedCompleteness(XSDataDouble(0.9))
xsDataInputBest.setAimedIOverSigma(XSDataDouble(3))
xsDataInputBest.setComplexity(XSDataString("min"))
xsDataInputBest.setAnomalousData(XSDataBoolean(True))
bestFileContentDat = EDUtilsFile.readFile(
os.path.join(self.strDataPath, "bestfile.dat"))
xsDataInputBest.setBestFileContentDat(XSDataString(bestFileContentDat))
bestFileContentPar = EDUtilsFile.readFile(
os.path.join(self.strDataPath, "bestfile.par"))
xsDataInputBest.setBestFileContentPar(XSDataString(bestFileContentPar))
bestFileContentHKL = EDUtilsFile.readFile(
os.path.join(self.strDataPath, "bestfile1.hkl"))
listBestFileContentHKL = []
listBestFileContentHKL.append(XSDataString(bestFileContentHKL))
xsDataInputBest.setBestFileContentHKL(listBestFileContentHKL)
xsDataInputBest.outputFile(self.strObtainedInputFile)
strExpectedInput = self.readAndParseFile(self.strReferenceInputFile)
strObtainedInput = self.readAndParseFile(self.strObtainedInputFile)
xsDataInputExpected = XSDataInputBest.parseString(strExpectedInput)
xsDataInputObtained = XSDataInputBest.parseString(strObtainedInput)
EDAssert.equal(xsDataInputExpected.marshal(),
xsDataInputObtained.marshal())
os.remove(self.strObtainedInputFile)
self.cleanUp(edPluginBest)
