def postProcess(self, _edObject=None):
EDPluginExecProcessScript.postProcess(self)
EDVerbose.DEBUG("EDPluginExecDamfiltv0_1.postProcess")
xsDataResult = XSDataResultDamfilt()
pathOutputFile = XSDataString(os.path.join(self.getWorkingDirectory(), self.__strOutputPdbFileName))
xsDataResult.setOutputPdbFile(XSDataFile(pathOutputFile))
self.setDataOutput(xsDataResult)
def postProcess(self, _edObject=None):
EDPluginExecProcessScript.postProcess(self)
EDVerbose.DEBUG("EDPluginExecDamfiltv0_1.postProcess")
xsDataResult = XSDataResultDamfilt()
pathOutputFile = XSDataString(
os.path.join(self.getWorkingDirectory(),
self.__strOutputPdbFileName))
xsDataResult.setOutputPdbFile(XSDataFile(pathOutputFile))
self.setDataOutput(xsDataResult)
def postProcess(self, _edObject=None):
EDPluginExecProcessScript.postProcess(self)
self.DEBUG("EDPluginExecDamfiltv0_3.postProcess")
xsDataResult = XSDataResultDamfilt()
pathOutputFile = os.path.join(self.getWorkingDirectory(), self.__strOutputPdbFileName)
if os.path.exists(pathOutputFile):
xsDataResult.model = XSDataSaxsModel(name=XSDataString("damfilt"))
xsDataResult.outputPdbFile = xsDataResult.model.pdbFile = XSDataFile(XSDataString(pathOutputFile))
res = parse_atsas.parsePDB(pathOutputFile, pathOutputFile)
if "volume" in res:
xsDataResult.model.volume = XSDataDouble(res["volume"])
if "Dmax" in res:
xsDataResult.model.dmax = XSDataDouble(res["Dmax"])
xsDataResult.status = XSDataStatus(message=self.getXSDataMessage(),
executiveSummary=XSDataString(os.linesep.join(self.getListExecutiveSummaryLines())))
self.setDataOutput(xsDataResult)
