def check(job, period):
"""Check log files for errors and warnings"""
global options
success = True
print "Checking job", job
basedir = ara.config.get('Analysis', 'basedir')
myDir = basedir + '/' + options.selection + '/' + period
errors = [ "exception", "segmentation", "error", "err:" ]
warnings = [ "warning", "wrn" ]
requirements = [ "End executing" ]
# Find all job files from directory
jobfiles = []
for filename in os.listdir(myDir):
if filename.startswith(job+'_') and filename.endswith("_condor.cfg"):
jobfiles.append(filename[:filename.find("_condor.cfg")])
if len(jobfiles) == 0:
print 'Error, no job files found for process', job
return False
# Check all job files
good = True
for filename in jobfiles:
success = ara.check_log(myDir+'/'+filename+"_stdout.log",
errors, warnings, requirements)
if not success:
good = False
if (options.resubmit):
resubmit(filename, period)
else:
success = ara.check_log(myDir+'/'+filename+"_stderr.log",
errors, warnings, None)
if not success:
good = False
if (options.resubmit):
resubmit(filename, period)
return good
def main():
optParser = optparse.OptionParser()
optParser.add_option(
"-c", "--config", dest="cfgfile", help="global configuration file", default=ara.defaultConfigFileName
)
(options, args) = optParser.parse_args()
if len(args) < 1:
optParser.print_help()
return 1
ara.config.read(options.cfgfile)
errors = ["exception", "segmentation", "error", "err:"]
warnings = ["warning", "wrn"]
requirements = ["End executing"]
# check log files on command line
for arg in args:
if not ara.check_log(arg, errors, warnings, requirements):
return 1
return 0