def set_element_form_choices(self, form): session = self.session form.term.choices = term_choice(session) form.individual.choices = individual_choice(session, None) # narrative? form.expression_type.choices = expression_type_choice(session) form.parent_link_property.choices = property_choice(session) return form
def handle_create_element(self, part_links, parts, req_post): logging.info("Hit Element create {0}".format(repr(req_post))) claim_id = req_post['claim'] assert self.ref_id == claim_id, "{0} != {1}".format(repr(self.ref_id), repr(claim_id)) session = self.session claim = session.query(Claim).filter_by(ref_id=claim_id).first() # TODO this or req_post['element'] ? e_choice = self.int_post_field('element_choice') if e_choice: parent_element = get_pelement(session, e_choice) participant = get_participant(session, parent_element.participant_id) else: # find the participant w/o elements participant = self.find_participant_without_elements(claim) self.set_claim_form(claim) self.set_participant_form(participant, parts) form = ElementCreate(req_post) form.expression_type.data = "None" form.term.choices = term_choice(session) form.individual.choices = individual_choice(session, None) # narrative? form.expression_type.choices = expression_type_choice(session) form.parent_link_property.choices = property_choice(session) form.element_choice.choices = element_choices(session, participant) self.element_form = form self.update_graph(claim, parts, part_links) self.set_hidden_fields(claim_id, participant.ref_id, req_post['element'])
def handle_commit_element(self, part_links, parts, req_post): logging.info("Hit commit element") claim_id = req_post['claim'] assert self.ref_id == claim_id, "{0} != {1}".format(repr(self.ref_id), repr(claim_id)) session = self.session claim = session.query(Claim).filter_by(ref_id=claim_id).first() e_choice = self.int_post_field('element_choice') if e_choice: active_element = get_pelement(session, e_choice) participant = active_element.participant else: participant = self.find_participant_without_elements(claim) active_element = None # best choice here? form = ElementCreate(req_post) form.element_choice.choices = element_choices(session, participant) form = self.set_element_form_choices(form) participant_id = participant.ref_id if self.enforce_element_type_constraints(form): self.report_bad_fields(form) logging.info("errors(1): {0}".format(form.errors)) new_element = ParticipantElement(participant_id=participant_id, old_id=0) expression_type = form.expression_type.data new_element.expression_type = expression_type session.add(new_element) transaction.commit() element_id = new_element.element_id logging.info("New element is {0}".format(repr(element_id))) if expression_type == "individual": p2i = Pelement2Individual() p2i.element = element_id p2i.individual = expand_curie(form.individual.data) p2i.dummy_id = 0 session.add(p2i) elif expression_type == 'some_term': p2t = Pelement2Term() p2t.element = element_id p2t.term = expand_curie(form.term.data) p2t.dummy_id = 0 session.add(p2t) if active_element: plink = ParticipantLink() plink.child = element_id plink.parent = active_element.element_id session.add(plink) else: self.update_participant_links(participant_id, element_id) else: logging.info("errors(2): {0}".format(form.errors)) form.element_choice.choices = [("None", "None")] form.expression_type.choices = expression_type_choice(session) form.parent_link_property.choices = property_choice(session) element_id = NOELEMENT self.set_claim_form(claim) participant = get_participant(session, participant_id) self.set_participant_form(participant, parts) self.element_form = form transaction.commit() self.update_graph(claim, parts, part_links) self.set_hidden_fields(claim_id, participant_id, element_id)
def handle_commit_participant(self, req_post): logging.info("Hit 'commit_participant'") ref_id = self.ref_id session = self.session assert req_post['claim'] == ref_id claim = session.query(Claim).filter_by(ref_id=ref_id).first() claim_id = claim.ref_id self.set_claim_form(claim) form = ParticipantCreate(req_post) self.set_participant_form_no_navigator_choices(form) form.participant_choice.data = "None" form.participant_choice.choices = [("None", "None")] form.validate() if form.errors: logging.warning("Participant Create Errors: {0}".format(repr(form.errors))) self.participant_form = form self.element_form = InactiveElementEdit(None) self.set_hidden_fields(claim_id, req_post['participant'], NOELEMENT) else: form = ParticipantEdit(self.request.POST) participant = Participant() new_ref_id = request_uid(self.session) transaction.commit() # maybe not needed participant.ref_id = new_ref_id participant.type = form.type.data participant.label = form.label.data participant.publication_taxon = form.publication_taxon.data participant.publication_anatomy = form.publication_anatomy.data participant.publication_substrate = form.publication_substrate.data participant.publication_text = form.publication_text.data participant.participation_property = expand_curie(form.participation_property.data) participant.claim_id = ref_id parts, part_links, _ = get_participants(self.session, ref_id) parts[participant.ref_id] = participant self.participant_form = form property_key = expand_curie(form.participation_property.data) property_term = session.query(Property).filter_by(ref_id=property_key).one() part_links[participant.ref_id] = property_term self.set_participant_form(participant, parts) self.set_participant_form(participant, parts) self.element_form = ElementCreateOnly() self.element_form.expression_type.data = "None" self.element_form.expression_type.choices = expression_type_choice(session) session.add(participant) transaction.commit() self.update_graph(claim, parts, part_links) self.set_hidden_fields(claim_id, new_ref_id, NOELEMENT) logging.info("Exiting commit participant")
def handle_choose_participant(self, req_post): claim_id = req_post['claim'] assert claim_id == self.ref_id, "claim_id {0}, ref_id {1}".format(claim_id, self.ref_id) session = self.session claim = session.query(Claim).filter_by(ref_id=claim_id).first() participant_id = req_post['participant_choice'] # not participant participant = get_participant(session, participant_id) head_element = get_head_element(session, participant) parts, part_links, active = get_participants(self.session, claim_id) self.set_claim_form(claim) self.choose_participant_form(participant, req_post, parts) if head_element: self.set_element_form(head_element, element_choices(self.session, participant)) element_id = str(head_element.element_id) else: self.element_form = ElementCreateOnly(None) self.element_form.expression_type.data = "None" self.element_form.expression_type.choices = expression_type_choice(session) element_id = NOELEMENT self.update_graph(claim, parts, part_links) self.set_hidden_fields(claim_id, participant_id, element_id)