def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.content_add_actions = {}
self.contentFilter = {'portal_type': 'Analysis',
'review_state':'impossible_state'}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url + "/add_analyses"
self.show_sort_column = False
self.show_select_row = False
self.show_select_column = True
self.pagesize = 100
self.columns = {
'ClientName': {'title': _('Client')},
'getClientOrderNumber': {'title': _('Order')},
'getRequestID': {'title': _('Request ID')},
'CategoryName': {'title': _('Category')},
'Title': {'title': _('Analysis')},
'getDateReceived': {'title': _('Date Received')},
'getDueDate': {'title': _('Due Date')},
}
self.review_states = [
{'title': _('All'), 'id':'all',
'transitions': ['assign'],
'columns':['ClientName',
'getClientOrderNumber',
'getRequestID',
'CategoryName',
'Title',
'getDateReceived',
'getDueDate'],
},
]
def __init__(self, context, request, fieldvalue, allow_edit):
BikaListingView.__init__(self, context, request)
self.context_actions = {}
self.contentFilter = {'review_state' : 'impossible_state'}
self.context_actions = {}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_select_column = False
self.pagesize = 1000
self.allow_edit = allow_edit
self.specsresults = {}
for specresults in fieldvalue:
self.specsresults[specresults['keyword']] = specresults
self.columns = {
'service': {'title': _('Service'), 'index': 'sortable_title', 'sortable': False},
'min': {'title': _('Min'), 'sortable': False,},
'max': {'title': _('Max'), 'sortable': False,},
'error': {'title': _('Permitted Error %'), 'sortable': False},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter':{},
'transitions': [],
'columns': ['service', 'min', 'max', 'error'],
},
]
def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.context_actions = {}
self.catalog = 'bika_setup_catalog'
self.contentFilter = {'review_state':'impossible_state'}
self.base_url = self.context.absolute_url()
self.view_url = self.context.absolute_url()
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_select_column = True
self.pagesize = 999999
self.show_workflow_action_buttons = False
self.show_categories=context.bika_setup.getCategoriseAnalysisServices()
self.expand_all_categories = False
self.ajax_categories = True
self.ajax_categories_url = self.base_url + '/service_view'
self.category_index = 'getCategoryTitle'
self.columns = {
'Service': {'title': _('Service'),
'sortable': False},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter': {},
'transitions': [],
'columns':['Service'],
},
]
def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.context_actions = {}
self.catalog = 'bika_setup_catalog'
self.contentFilter = {'review_state':'impossible_state'}
self.base_url = self.context.absolute_url()
self.view_url = self.context.absolute_url()
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_select_column = True
self.pagesize = 1000
self.show_workflow_action_buttons = False
self.columns = {
'Service': {'title': _('Service'),
'sortable': False},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter': {},
'transitions': [],
'columns':['Service'],
},
]
def __init__(self, context, request, **kwargs):
BikaListingView.__init__(self, context, request, **kwargs)
self.form_id = "instrumentcertifications"
self.columns = {
'Title': {'title': _('Cert. Num'),
'index': 'sortable_title'},
'getAgency': {'title': _('Agency')},
'getDate': {'title': _('Date')},
'getValidFrom': {'title': _('Valid from')},
'getValidTo': {'title': _('Valid to')},
'getDocument': {'title': _('Document')},
}
self.review_states = [
{'id':'default',
'title':_('All'),
'contentFilter':{},
'columns': [ 'Title',
'getAgency',
'getDate',
'getValidFrom',
'getValidTo',
'getDocument'],
'transitions': [{}]},
]
self.allow_edit = False
self.show_select_column = False
self.show_workflow_action_buttons = False
uids = [c.UID() for c in self.context.getCertifications()]
self.catalog = 'portal_catalog'
self.contentFilter = {'UID': uids, 'sort_on': 'sortable_title'}
def __init__(self, context, request, field):
BikaListingView.__init__(self, context, request)
self.selected = [o.UID() for o in getattr(field, field.accessor)()]
self.context_actions = {}
self.catalog = "bika_setup_catalog"
self.contentFilter = {'review_state': 'impossible_state'}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url
self.show_categories = True
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_select_column = True
self.pagesize = 1000
self.form_id = 'serviceswidget'
self.columns = {
'Service': {'title': _('Service')},
'Keyword': {'title': _('Keyword'),
'index': 'getKeyword'},
'Method': {'title': _('Method')},
'Calculation': {'title': _('Calculation')},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter':{},
'transitions': [],
'columns':['Service',
'Keyword',
'Method',
'Calculation', ]
},
]
def __init__(self, context, request, fieldvalue, allow_edit):
BikaListingView.__init__(self, context, request)
self.context_actions = {}
self.contentFilter = {"review_state": "impossible_state"}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_column_toggles = False
self.show_select_column = False
self.pagesize = 1000
self.allow_edit = allow_edit
self.form_id = "partitions"
self.columns = {
"part_id": {"title": _("Partition"), "sortable": False},
"container_uid": {"title": _("Container"), "sortable": False},
"preservation_uid": {"title": _("Preservation"), "sortable": False},
}
self.review_states = [
{
"id": "default",
"title": _("All"),
"contentFilter": {},
"transitions": [{"id": "empty"}], # none
"columns": ["part_id", "container_uid", "preservation_uid"],
}
]
self.fieldvalue = fieldvalue
def __init__(self, context, request, fieldvalue, allow_edit):
BikaListingView.__init__(self, context, request)
self.context_actions = {}
self.contentFilter = {'review_state': 'impossible_state'}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_select_column = False
self.setoddeven = False
self.pagesize = 1000
self.allow_edit = allow_edit
self.referenceresults = {}
# we want current field value as a dict
# key:uid, value:{dictionary from field list of dict}
for refres in fieldvalue:
self.referenceresults[refres['uid']] = refres
self.columns = {
'service': {'title': _('Service')},
'result': {'title': _('Expected Result')},
'error': {'title': _('Permitted Error %')},
'min': {'title': _('Min')},
'max': {'title': _('Max')}
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter':{},
'transitions': [],
'columns':['service', 'result', 'error', 'min', 'max'],
},
]
def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.show_sort_column = False
self.show_select_row = False
self.show_select_column = False
self.show_workflow_action_buttons = False
self.pagesize = 1000
self.icon = "++resource++bika.lims.images/%s_big.png" % \
context.portal_type.lower()
self.title = "%s %s" % (self.context.Title(),
self.context.translate(_("Log")))
self.description = ""
self.columns = {
'Version': {'title': _('Version'),'sortable':False},
'Date': {'title': _('Date'),'sortable':False},
'User': {'title': _('User'),'sortable':False},
'Action': {'title': _('Action'),'sortable':False},
'Description': {'title': _('Description'),'sortable':False},
}
self.review_states = [
{'id':'default',
'title': 'All',
'contentFilter':{},
'columns': ['Version',
'Date',
'User',
'Action',
'Description']},
]
def __init__(self, context, request, fieldvalue, allow_edit):
BikaListingView.__init__(self, context, request)
self.context_actions = {}
self.contentFilter = {'review_state': 'impossible_state'}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_column_toggles = False
self.show_select_column = False
self.setoddeven = False
self.pagesize = 1000
self.allow_edit = allow_edit
self.form_id = "partitions"
self.columns = {
'part_id': {'title': _('Partition'),
'sortable': False,},
'container_uid': {'title': _('Container'),
'sortable': False,},
'preservation_uid': {'title': _('Preservation'),
'sortable': False,},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter':{},
'transitions': [{'id':'empty'}], # none
'columns':['part_id', 'container_uid', 'preservation_uid'],
},
]
self.fieldvalue = fieldvalue
def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.context_actions = {}
self.catalog = 'bika_analysis_catalog'
self.contentFilter = {'portal_type': 'Analysis',
'review_state':'impossible_state'}
self.base_url = self.context.absolute_url()
self.view_url = self.context.absolute_url() + "/add_duplicate"
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_select_column = False
self.columns = {
'Position': {'title': _('Position')},
'RequestID': {'title': _('Request ID')},
'Client': {'title': _('Client')},
'created': {'title': _('Date Requested')},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter':{},
'transitions': [],
'columns':['Position', 'RequestID', 'Client', 'created'],
},
]
def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.icon = "++resource++bika.lims.images/worksheet_big.png"
self.title = _("Add Analyses")
self.description = ""
self.catalog = "bika_analysis_catalog"
self.context_actions = {}
# initial review state for first form display of the worksheet
# add_analyses search view - first batch of analyses, latest first.
self.contentFilter = {'portal_type': 'Analysis',
'review_state':'sample_received',
'worksheetanalysis_review_state':'unassigned',
'cancellation_state':'active'}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url + "/add_analyses"
self.show_sort_column = False
self.show_select_row = False
self.show_select_column = True
self.pagesize = 50
self.columns = {
'Client': {
'title': _('Client'),
'index':'getClientTitle'},
'getClientOrderNumber': {
'title': _('Order'),
'index': 'getClientOrderNumber'},
'getRequestID': {
'title': _('Request ID'),
'index': 'getRequestID'},
'CategoryTitle': {
'title': _('Category'),
'index':'getCategoryTitle'},
'Title': {
'title': _('Analysis'),
'index':'sortable_title'},
'getDateReceived': {
'title': _('Date Received'),
'index': 'getDateReceived'},
'getDueDate': {
'title': _('Due Date'),
'index': 'getDueDate'},
}
self.filter_indexes = ['Title',]
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter': {},
'transitions': [{'id':'assign'}, ],
'columns':['Client',
'getClientOrderNumber',
'getRequestID',
'CategoryTitle',
'Title',
'getDateReceived',
'getDueDate'],
},
]
def __init__(self, context, request, field=None, category=None):
BikaListingView.__init__(self, context, request)
if field:
self.selected = [o.UID() for o in getattr(field, field.accessor)()]
else:
self.selected = []
self.category = category if category else None
self.context_actions = {}
self.catalog = "bika_setup_catalog"
self.contentFilter = {'review_state': 'impossible_state'}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_select_column = True
self.pagesize = 999999
self.form_id = 'serviceswidget'
self.show_categories = False
self.categories = []
# TODO Check if filtering by multiple UIDs should be enabled
self.do_cats = self.context.bika_setup.getCategoriseAnalysisServices()
if self.do_cats:
self.show_categories = True
self.expand_all_categories = False
self.ajax_categories = True
self.category_index = 'getCategoryTitle'
self.ajax_categories_url = context.absolute_url() + \
"/ajax_services_expand_category"
self.columns = {
'Service': {'title': _('Service')},
'Keyword': {'title': _('Keyword'),
'index': 'getKeyword'},
'Method': {'title': _('Method')},
'Calculation': {'title': _('Calculation')},
}
self.review_states = [
{'id':'default',
'title': _('All'),
'contentFilter':{},
'transitions': [],
'columns':['Service',
'Keyword',
'Method',
'Calculation', ]
},
]
def __call__(self):
ar = self.context
workflow = getToolByName(ar, "portal_workflow")
# If is a retracted AR, show the link to child AR and show a warn msg
if workflow.getInfoFor(ar, "review_state") == "invalid":
childar = hasattr(ar, "getChildAnalysisRequest") and ar.getChildAnalysisRequest() or None
childid = childar and childar.getRequestID() or None
message = _(
"This Analysis Request has been withdrawn and is "
"shown for trace-ability purposes only. Retest: "
"${retest_child_id}.",
mapping={"retest_child_id": safe_unicode(childid) or ""},
)
self.context.plone_utils.addPortalMessage(self.context.translate(message), "warning")
# If is an AR automatically generated due to a Retraction, show it's
# parent AR information
if hasattr(ar, "getParentAnalysisRequest") and ar.getParentAnalysisRequest():
par = ar.getParentAnalysisRequest()
message = _(
"This Analysis Request has been "
"generated automatically due to "
"the retraction of the Analysis "
"Request ${retracted_request_id}.",
mapping={"retracted_request_id": par.getRequestID()},
)
self.context.plone_utils.addPortalMessage(self.context.translate(message), "info")
template = BikaListingView.__call__(self)
return template
def folderitems(self):
mtool = getToolByName(self.context, "portal_membership")
if mtool.checkPermission(ManageBika, self.context):
del self.review_states[0]["transitions"]
self.show_select_column = True
self.review_states.append(
{
"id": "active",
"title": _("Active"),
"contentFilter": {"inactive_state": "active"},
"transitions": [{"id": "deactivate"}],
"columns": ["Title", "Description"],
}
)
self.review_states.append(
{
"id": "inactive",
"title": _("Dormant"),
"contentFilter": {"inactive_state": "inactive"},
"transitions": [{"id": "activate"}],
"columns": ["Title", "Description"],
}
)
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if "obj" in items[x]:
items[x]["replace"]["Title"] = "<a href='%s'>%s</a>" % (items[x]["url"], items[x]["Title"])
return items
def folderitems(self):
items = BikaListingView.folderitems(self)
props = self.context.portal_properties.site_properties
for x in range(len(items)):
if 'obj' not in items[x]:
continue
obj = items[x]['obj']
obj_url = obj.absolute_url()
file = obj.getReportFile()
icon = file.icon
items[x]['Client'] = ''
client = obj.getClient()
if client:
items[x]['replace']['Client'] = "<a href='%s'>%s</a>" % \
(client.absolute_url(),
client.Title())
items[x]['FileSize'] = '%sKb' % (file.get_size() / 1024)
items[x]['Created'] = self.ulocalized_time(obj.created())
items[x]['By'] = self.user_fullname(obj.Creator())
items[x]['replace']['Title'] = \
"<a href='%s/at_download/ReportFile'>%s</a>" % \
(obj_url, items[x]['Title'])
return items
def folderitems(self):
mtool = getToolByName(self.context, 'portal_membership')
if mtool.checkPermission(ManageBika, self.context):
del self.review_states[0]['transitions']
self.show_select_column = True
self.review_states.append(
{'id': 'active',
'title': _('Active'),
'contentFilter': {'inactive_state': 'active'},
'transitions': [{'id':'deactivate'}, ],
'columns': ['Title', 'Description']})
self.review_states.append(
{'id': 'inactive',
'title': _('Dormant'),
'contentFilter': {'inactive_state': 'inactive'},
'transitions': [{'id':'activate'}, ],
'columns': ['Title', 'Description']})
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if 'obj' in items[x]:
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
def folderitems(self):
items = BikaListingView.folderitems(self)
outitems = []
toshow = []
for val in self.context.getDocuments():
toshow.append(val.UID())
for x in range(len(items)):
if not items[x].has_key('obj'):
continue
obj = items[x]['obj']
if obj.UID() in toshow:
items[x]['replace']['DocumentID'] = "<a href='%s'>%s</a>" % \
(items[x]['url'],
items[x]['DocumentID'])
items[x]['SmallDesc'] = obj.getSmallDescription()
items[x]['FileDownload'] = obj.getFile().filename
filename = obj.getFile().filename if obj.getFile().filename \
!= '' else 'Image'
items[x]['replace']['FileDownload'] = "<a href='%s'>%s</a>" % \
(
obj.getFile().absolute_url_path(),
filename)
items[x]['DatetimeCreated'] = self.ulocalized_time(
obj.getDatetimeCreated())
outitems.append(items[x])
return outitems
def __call__(self):
ar = self.context
workflow = getToolByName(ar, 'portal_workflow')
# If is a retracted AR, show the link to child AR and show a warn msg
if workflow.getInfoFor(ar, 'review_state') == 'invalid':
childar = hasattr(ar, 'getChildAnalysisRequest') \
and ar.getChildAnalysisRequest() or None
childid = childar and childar.getRequestID() or None
message = _('This Analysis Request has been withdrawn and is '
'shown for trace-ability purposes only. Retest: '
'${retest_child_id}.',
mapping={'retest_child_id': safe_unicode(childid) or ''})
self.context.plone_utils.addPortalMessage(
self.context.translate(message), 'warning')
# If is an AR automatically generated due to a Retraction, show it's
# parent AR information
if hasattr(ar, 'getParentAnalysisRequest') \
and ar.getParentAnalysisRequest():
par = ar.getParentAnalysisRequest()
message = _('This Analysis Request has been '
'generated automatically due to '
'the retraction of the Analysis '
'Request ${retracted_request_id}.',
mapping={'retracted_request_id': par.getRequestID()})
self.context.plone_utils.addPortalMessage(
self.context.translate(message), 'info')
template = BikaListingView.__call__(self)
return template
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
itype = obj.getInstrumentType()
items[x]['Type'] = itype.Title() if itype else ''
ibrand = obj.getManufacturer()
items[x]['Brand'] = ibrand.Title() if ibrand else ''
items[x]['Model'] = obj.getModel()
data = obj.getCertificateExpireDate()
if data is None:
items[x]['ExpiryDate'] = _("No date set")
else:
items[x]['ExpiryDate'] = data.asdatetime().strftime(self.date_format_short)
if obj.isOutOfDate():
items[x]['WeeksToExpire'] = _("Out of date")
else:
weeks, days = obj.getWeeksToExpire()
weeks_to_expire = _("{} weeks and {} day(s)".format(str(weeks), str(days)))
items[x]['WeeksToExpire'] = weeks_to_expire
if obj.getMethod():
items[x]['Method'] = obj.getMethod().Title()
items[x]['replace']['Method'] = "<a href='%s'>%s</a>" % \
(obj.getMethod().absolute_url(), items[x]['Method'])
else:
items[x]['Method'] = ''
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'):
continue
obj = items[x]['obj']
service = obj.getService()
client = obj.aq_parent.aq_parent
items[x]['getClientOrderNumber'] = obj.getClientOrderNumber()
items[x]['getDateReceived'] = self.ulocalized_time(obj.getDateReceived())
DueDate = obj.getDueDate()
items[x]['getDueDate'] = self.ulocalized_time(DueDate)
if DueDate < DateTime():
items[x]['after']['DueDate'] = '<img width="16" height="16" src="%s/++resource++bika.lims.images/late.png" title="%s"/>' % \
(self.context.absolute_url(),
self.context.translate(_("Late Analysis")))
items[x]['CategoryTitle'] = service.getCategory().Title()
if getSecurityManager().checkPermission(EditResults, obj.aq_parent):
url = obj.aq_parent.absolute_url() + "/manage_results"
else:
url = obj.aq_parent.absolute_url()
items[x]['getRequestID'] = obj.aq_parent.getRequestID()
items[x]['replace']['getRequestID'] = "<a href='%s'>%s</a>" % \
(url, items[x]['getRequestID'])
items[x]['Client'] = client.Title()
items[x]['replace']['Client'] = "<a href='%s'>%s</a>" % \
(client.absolute_url(), client.Title())
return items
def folderitems(self):
self.filter_indexes = None
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if 'obj' not in items[x]:
continue
obj = items[x]['obj']
bid = obj.getBatchID()
items[x]['BatchID'] = bid
items[x]['replace']['BatchID'] = "<a href='%s/%s'>%s</a>" % (items[x]['url'], 'analysisrequests', bid)
title = obj.Title()
items[x]['Title'] = title
items[x]['replace']['Title'] = "<a href='%s/%s'>%s</a>" % (items[x]['url'], 'analysisrequests', title)
if obj.getClient():
items[x]['Client'] = obj.getClient().Title()
items[x]['replace']['Client'] = "<a href='%s'>%s</a>" % ( obj.getClient().absolute_url(), obj.getClient().Title())
else:
items[x]['Client'] = ''
date = obj.Schema().getField('BatchDate').get(obj)
if callable(date):
date = date()
items[x]['BatchDate'] = date
items[x]['replace']['BatchDate'] = self.ulocalized_time(date)
return items
def folderitems(self, full_objects=False):
currency = currency_format(self.context, 'en')
self.show_all = True
self.contentsMethod = self.getInvoices
items = BikaListingView.folderitems(self, full_objects)
for item in items:
obj = item['obj']
number_link = "<a href='%s'>%s</a>" % (
item['url'], obj.getId()
)
item['replace']['id'] = number_link
if obj.getClient():
item['client'] = obj.getClient().Title()
item['replace']['client'] = "<a href='%s'>%s</a>" % (
obj.getClient().absolute_url(), obj.getClient().Title()
)
item['email'] = obj.getClient().getEmailAddress()
item['replace']['email'] = "<a href='%s'>%s</a>" % (
'mailto:%s' % obj.getClient().getEmailAddress(), obj.getClient().getEmailAddress()
)
item['phone'] = obj.getClient().getPhone()
else:
item['client'] = ''
item['email'] = ''
item['phone'] = ''
item['invoicedate'] = self.ulocalized_time(obj.getInvoiceDate())
item['startdate'] = self.ulocalized_time(obj.getBatchStartDate())
item['enddate'] = self.ulocalized_time(obj.getBatchEndDate())
item['subtotal'] = currency(obj.getSubtotal())
item['vatamount'] = currency(obj.getVATAmount())
item['total'] = currency(obj.getTotal())
return items
def folderitems(self, full_objects=False):
items = BikaListingView.folderitems(self, full_objects=False)
# Hide Preservation/Sampling workflow actions if the edit columns
# are not displayed.
# Hide schedule_sampling if user has no rights
toggle_cols = self.get_toggle_cols()
new_states = []
for i,state in enumerate(self.review_states):
if state and self.review_state and state['id'] == self.review_state.get('id', ''):
if 'getSampler' not in toggle_cols \
or 'DateSampled' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('sample')
else:
state['hide_transitions'] = ['sample',]
if 'getPreserver' not in toggle_cols \
or 'getDatePreserved' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('preserve')
else:
state['hide_transitions'] = ['preserve',]
# Check if the user has the rights to schedule samplings and
# the check-box 'ScheduleSamplingEnabled' in bikasetup is set
if self._schedule_sampling_permissions():
# Show the workflow transition button 'schedule_sampling'
pass
else:
# Hiddes the button
state['hide_transitions'] = ['schedule_sampling', ]
new_states.append(state)
self.review_states = new_states
return items
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['ID'] = obj.id
items[x]['Manufacturer'] = obj.getReferenceManufacturer() and \
obj.getReferenceManufacturer().Title() or ''
items[x]['Definition'] = obj.getReferenceDefinition() and \
obj.getReferenceDefinition().Title() or ''
items[x]['DateSampled'] = \
TimeOrDate(self.context, obj.getDateSampled())
items[x]['DateReceived'] = \
TimeOrDate(self.context, obj.getDateReceived())
items[x]['DateOpened'] = \
TimeOrDate(self.context, obj.getDateOpened())
items[x]['ExpiryDate'] = \
TimeOrDate(self.context, obj.getExpiryDate())
after_icons = ''
if obj.getBlank():
after_icons += "<img src='++resource++bika.lims.images/blank.png' title='Blank'>"
if obj.getHazardous():
after_icons += "<img src='++resource++bika.lims.images/hazardous.png' title='Hazardous'>"
items[x]['replace']['ID'] = "<a href='%s/base_view'>%s</a> %s" % \
(items[x]['url'], items[x]['ID'], after_icons)
return items
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['SampleID'] = obj.getSampleID()
items[x]['replace']['SampleID'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['SampleID'])
items[x]['replace']['Requests'] = ",".join(
["<a href='%s'>%s</a>" % (o.absolute_url(), o.Title())
for o in obj.getAnalysisRequests()])
items[x]['ClientReference'] = obj.getClientReference()
items[x]['ClientSampleID'] = obj.getClientSampleID()
items[x]['SampleTypeTitle'] = obj.getSampleTypeTitle()
items[x]['SamplePointTitle'] = obj.getSamplePointTitle()
datesampled = obj.getDateSampled()
items[x]['DateSampled'] = TimeOrDate(self.context, datesampled, long_format = 0)
items[x]['future_DateSampled'] = datesampled.Date() > DateTime() and \
TimeOrDate(self.context, datesampled) or ''
items[x]['DateReceived'] = TimeOrDate(self.context, obj.getDateReceived())
after_icons = ''
if obj.getSampleType().getHazardous():
after_icons += "<img title='Hazardous' src='++resource++bika.lims.images/hazardous.png'>"
if after_icons:
items[x]['after']['SampleID'] = after_icons
return items
def folderitems(self):
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
roles = member.getRoles()
self.allow_edit = 'LabManager' in roles or 'Manager' in roles
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'):
continue
obj = items[x]['obj']
cat = obj.getCategoryTitle()
# Category (upper C) is for display column value
items[x]['Category'] = cat
if self.do_cats:
# category is for bika_listing to groups entries
items[x]['category'] = cat
if cat not in self.categories:
self.categories.append(cat)
analyses = [a.UID() for a in self.field_value]
items[x]['selected'] = items[x]['uid'] in analyses
items[x]['class']['Title'] = 'service_title'
calculation = obj.getCalculation()
items[x]['Calculation'] = calculation and calculation.Title()
locale = locales.getLocale('en')
currency = self.context.bika_setup.getCurrency()
symbol = locale.numbers.currencies[currency].symbol
items[x]['Price'] = "%s %s" % (symbol, obj.getPrice())
items[x]['class']['Price'] = 'nowrap'
after_icons = ''
if obj.getAccredited():
after_icons += "<img\
src='%s/++resource++bika.lims.images/accredited.png'\
title='%s'>" % (self.context.absolute_url(),
_("Accredited"))
if obj.getReportDryMatter():
after_icons += "<img\
src='%s/++resource++bika.lims.images/dry.png'\
title='%s'>" % (self.context.absolute_url(),
_("Can be reported as dry matter"))
if obj.getAttachmentOption() == 'r':
after_icons += "<img\
src='%s/++resource++bika.lims.images/attach_reqd.png'\
title='%s'>" % (self.context.absolute_url(),
_("Attachment required"))
if obj.getAttachmentOption() == 'n':
after_icons += "<img\
src='%s/++resource++bika.lims.images/attach_no.png'\
title='%s'>" % (self.context.absolute_url(),
_('Attachment not permitted'))
if after_icons:
items[x]['after']['Title'] = after_icons
return items
def folderitems(self):
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
itype = obj.getInstrumentType()
items[x]['Type'] = itype.Title() if itype else ''
ibrand = obj.getManufacturer()
items[x]['Brand'] = ibrand.Title() if ibrand else ''
items[x]['Model'] = obj.getModel()
data = obj.getCertificateExpireDate()
if data == '':
items[x]['ExpiryDate'] = "No date avaliable"
else:
items[x]['ExpiryDate'] = data.asdatetime().strftime(self.date_format_short)
if obj.isOutOfDate():
items[x]['WeeksToExpire'] = "Out of date"
else:
date = int(str(obj.getWeeksToExpire()).split(',')[0].split(' ')[0])
weeks,days = divmod(date,7)
items[x]['WeeksToExpire'] = str(weeks)+" weeks"+" "+str(days)+" days"
if obj.getMethod():
items[x]['Method'] = obj.getMethod().Title()
items[x]['replace']['Method'] = "<a href='%s'>%s</a>" % \
(obj.getMethod().absolute_url(), items[x]['Method'])
else:
items[x]['Method'] = ''
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
return items
def folderitems(self):
mtool = getToolByName(self.context, 'portal_membership')
if mtool.checkPermission(ManageBika, self.context):
del self.review_states[0]['transitions']
self.show_select_column = True
self.review_states.append(
{'id':'active',
'title': _('Active'),
'contentFilter': {'inactive_state': 'active'},
'transitions': [{'id':'deactivate'}, ],
'columns': ['Title', 'Description']})
self.review_states.append(
{'id':'inactive',
'title': _('Dormant'),
'contentFilter': {'inactive_state': 'inactive'},
'transitions': [{'id':'activate'}, ],
'columns': ['Title', 'Description']})
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
items[x]['replace']['Title'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
# chop the description down to 120-ish chars...
descr = items[x]['Description'][:100].split(" ")
descr = " ".join(descr[:-1])
if len(items[x]['Description']) > 100:
descr += "..."
items[x]['Description'] = descr
return items
def folderitems(self):
self.contentsMethod = self.getClientList
items = BikaListingView.folderitems(self)
registry = getUtility(IRegistry)
if 'bika.lims.client.default_landing_page' in registry:
landing_page = registry['bika.lims.client.default_landing_page']
else:
landing_page = 'analysisrequests'
for item in items:
if "obj" not in item:
continue
obj = item['obj']
item['replace']['title'] = "<a href='%s/%s'>%s</a>" % \
(item['url'], landing_page.encode('ascii'), item['title'])
item['EmailAddress'] = obj.getEmailAddress()
item['replace']['EmailAddress'] = "<a href='%s'>%s</a>" % \
('mailto:%s' % obj.getEmailAddress(), obj.getEmailAddress())
item['Phone'] = obj.getPhone()
item['Fax'] = obj.getFax()
item['ClientID'] = obj.getClientID()
item['BulkDiscount'] = obj.getBulkDiscount() and 'Y' or 'N'
item['MemberDiscountApplies'] = obj.getMemberDiscountApplies() and 'Y' or 'N'
return items
def folderitems(self):
self.categories = []
bsc = getToolByName(self.context, 'bika_setup_catalog')
wf = getToolByName(self.context, 'portal_workflow')
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
roles = member.getRoles()
self.allow_edit = 'LabManager' in roles or 'Manager' in roles
items = BikaListingView.folderitems(self)
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
cat = obj.getCategoryTitle()
# Category (upper C) is for display column value
items[x]['Category'] = cat
if self.do_cats:
# category is for bika_listing to groups entries
items[x]['category'] = cat
if cat not in self.categories:
self.categories.append(cat)
analyses = [a.UID() for a in self.fieldvalue]
items[x]['selected'] = items[x]['uid'] in analyses
items[x]['class']['Title'] = 'service_title'
calculation = obj.getCalculation()
items[x]['Calculation'] = calculation and calculation.Title()
locale = locales.getLocale('en')
currency = self.context.bika_setup.getCurrency()
symbol = locale.numbers.currencies[currency].symbol
items[x]['Price'] = "%s %s" % (symbol, obj.getPrice())
items[x]['class']['Price'] = 'nowrap'
after_icons = ''
if obj.getAccredited():
after_icons += "<img\
src='%s/++resource++bika.lims.images/accredited.png'\
title='%s'>" % (self.context.absolute_url(), _("Accredited"))
if obj.getReportDryMatter():
after_icons += "<img\
src='%s/++resource++bika.lims.images/dry.png'\
title='%s'>" % (self.context.absolute_url(),
_("Can be reported as dry matter"))
if obj.getAttachmentOption() == 'r':
after_icons += "<img\
src='%s/++resource++bika.lims.images/attach_reqd.png'\
title='%s'>" % (self.context.absolute_url(),
_("Attachment required"))
if obj.getAttachmentOption() == 'n':
after_icons += "<img\
src='%s/++resource++bika.lims.images/attach_no.png'\
title='%s'>" % (self.context.absolute_url(),
_('Attachment not permitted'))
if after_icons:
items[x]['after']['Title'] = after_icons
if self.profile:
# Display analyses for this Analysis Service in results?
ser = self.profile.getAnalysisServiceSettings(obj.UID())
items[x]['allow_edit'] = [
'Hidden',
]
items[x]['Hidden'] = ser.get('hidden', obj.getHidden())
self.categories.sort()
return items
def folderitem(self, obj, item, index):
# Additional info from AnalysisRequest to be added in the item
# generated by default by bikalisting.
# Call the folderitem method from the base class
item = BikaListingView.folderitem(self, obj, item, index)
if not item:
return None
# This variable will contain the full analysis request if there is
# need to work with the full object instead of the brain
full_object = None
item["Creator"] = self.user_fullname(obj.Creator)
# If we redirect from the folderitems view we should check if the
# user has permissions to medify the element or not.
priority_sort_key = obj.getPrioritySortkey
if not priority_sort_key:
# Default priority is Medium = 3.
# The format of PrioritySortKey is <priority>.<created>
priority_sort_key = "3.%s" % obj.created.ISO8601()
priority = priority_sort_key.split(".")[0]
priority_text = PRIORITIES.getValue(priority)
priority_div = """<div class="priority-ico priority-%s">
<span class="notext">%s</span><div>
"""
item["replace"]["Priority"] = priority_div % (priority, priority_text)
item["replace"]["getProfilesTitle"] = obj.getProfilesTitleStr
analysesnum = obj.getAnalysesNum
if analysesnum:
num_verified = str(analysesnum[0])
num_total = str(analysesnum[1])
item["getAnalysesNum"] = "{0}/{1}".format(num_verified, num_total)
else:
item["getAnalysesNum"] = ""
# Progress
num_verified = 0
num_submitted = 0
num_total = 0
if analysesnum and len(analysesnum) > 1:
num_verified = analysesnum[0]
num_total = analysesnum[1]
num_submitted = num_total - num_verified
if len(analysesnum) > 2:
num_wo_results = analysesnum[2]
num_submitted = num_total - num_verified - num_wo_results
num_steps_total = num_total * 2
num_steps = (num_verified * 2) + (num_submitted)
progress_perc = 0
if num_steps > 0 and num_steps_total > 0:
progress_perc = (num_steps * 100) / num_steps_total
progress = '<div class="progress-bar-container">' + \
'<div class="progress-bar" style="width:{0}%"></div>' + \
'<div class="progress-perc">{0}%</div></div>'
item["replace"]["Progress"] = progress.format(progress_perc)
item["BatchID"] = obj.getBatchID
if obj.getBatchID:
item['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(obj.getBatchURL, obj.getBatchID)
# TODO: SubGroup ???
# val = obj.Schema().getField('SubGroup').get(obj)
# item['SubGroup'] = val.Title() if val else ''
date = obj.getSamplingDate
item["SamplingDate"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDateReceived
item["getDateReceived"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDueDate
item["getDueDate"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDatePublished
item["getDatePublished"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDateVerified
item["getDateVerified"] = \
self.ulocalized_time(date, long_format=1) if date else ""
if self.printwfenabled:
item["Printed"] = ""
printed = obj.getPrinted if hasattr(obj, "getPrinted") else "0"
print_icon = ""
if printed == "0":
print_icon = get_image("delete.png",
title=t(_("Not printed yet")))
elif printed == "1":
print_icon = get_image("ok.png", title=t(_("Printed")))
elif printed == "2":
print_icon = get_image("exclamation.png",
title=t(
_("Republished after last print")))
item["after"]["Printed"] = print_icon
item["SamplingDeviation"] = obj.getSamplingDeviationTitle
item["getStorageLocation"] = obj.getStorageLocationTitle
after_icons = ""
# Getting a dictionary with each workflow id and current state in it
states_dict = obj.getObjectWorkflowStates
if obj.assigned_state == 'assigned':
after_icons += get_image("worksheet.png",
title=t(_("All analyses assigned")))
if states_dict.get('review_state', '') == 'invalid':
after_icons += get_image("delete.png",
title=t(_("Results have been withdrawn")))
due_date = obj.getDueDate
if due_date and due_date < (obj.getDatePublished or DateTime()):
due_date_str = self.ulocalized_time(due_date)
img_title = "{}: {}".format(t(_("Late Analyses")), due_date_str)
after_icons += get_image("late.png", title=img_title)
if obj.getSamplingDate and obj.getSamplingDate > DateTime():
after_icons += get_image("calendar.png",
title=t(_("Future dated sample")))
if obj.getInvoiceExclude:
after_icons += get_image("invoice_exclude.png",
title=t(_("Exclude from invoice")))
if obj.getHazardous:
after_icons += get_image("hazardous.png", title=t(_("Hazardous")))
if after_icons:
item['after']['getId'] = after_icons
item['Created'] = self.ulocalized_time(obj.created, long_format=1)
if obj.getContactUID:
item['ClientContact'] = obj.getContactFullName
item['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(obj.getContactURL, obj.getContactFullName)
else:
item["ClientContact"] = ""
# TODO-performance: If SamplingWorkflowEnabled, we have to get the
# full object to check the user permissions, so far this is
# a performance hit.
if obj.getSamplingWorkflowEnabled:
# We don't do anything with Sampling Date.
# User can modify Sampling date
# inside AR view. In this listing view,
# we only let the user to edit Date Sampled
# and Sampler if he wants to make 'sample' transaction.
if not obj.getDateSampled:
datesampled = self.ulocalized_time(DateTime(),
long_format=True)
item["class"]["getDateSampled"] = "provisional"
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = obj.getSampler
if sampler:
item["replace"]["getSampler"] = obj.getSamplerFullName
if "Sampler" in self.roles and not sampler:
sampler = self.member.id
item["class"]["getSampler"] = "provisional"
# sampling workflow - inline edits for Sampler and Date Sampled
if states_dict.get('review_state', '') == 'to_be_sampled':
# We need to get the full object in order to check
# the permissions
full_object = obj.getObject()
checkPermission =\
self.context.portal_membership.checkPermission
if checkPermission(SampleSample, full_object):
item["required"] = ["getSampler", "getDateSampled"]
item["allow_edit"] = ["getSampler", "getDateSampled"]
# TODO-performance: hit performance while getting the
# sample object...
# TODO Can LabManagers be a Sampler?!
samplers = getUsers(full_object.getSample(), [
"Sampler",
])
username = self.member.getUserName()
users = [({
"ResultValue": u,
"ResultText": samplers.getValue(u)
}) for u in samplers]
item['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
sampler = Sampler
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = obj.getSamplerFullName if obj.getSampler else ''
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = ""
item["getDateSampled"] = datesampled
item["getSampler"] = sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
item["getPreserver"] = ""
item["getDatePreserved"] = ""
# TODO-performance: If inline preservation wants to be used, we
# have to get the full object to check the user permissions, so
# far this is a performance hit.
# inline edits for Preserver and Date Preserved
# if checkPermission(PreserveSample, obj):
# item['required'] = ['getPreserver', 'getDatePreserved']
# item['allow_edit'] = ['getPreserver', 'getDatePreserved']
# preservers = getUsers(obj, ['Preserver',
# 'LabManager', 'Manager'])
# username = self.member.getUserName()
# users = [({'ResultValue': u,
# 'ResultText': preservers.getValue(u)})
# for u in preservers]
# item['choices'] = {'getPreserver': users}
# preserver = username in preservers.keys() and username or ''
# item['getPreserver'] = preserver
# item['getDatePreserved'] = self.ulocalized_time(
# DateTime(),
# long_format=1)
# item['class']['getPreserver'] = 'provisional'
# item['class']['getDatePreserved'] = 'provisional'
# Submitting user may not verify results
# Thee conditions to improve performance, some functions to check
# the condition need to get the full analysis request.
if states_dict.get("review_state", "") == "to_be_verified":
allowed = user.has_permission(VerifyPermission,
username=self.member.getUserName())
# TODO-performance: isUserAllowedToVerify getts all analysis
# objects inside the analysis request.
if allowed:
# Gettin the full object if not get before
full_object = full_object if full_object else obj.getObject()
if not full_object.isUserAllowedToVerify(self.member):
item["after"]["state_title"] = get_image(
"submitted-by-current-user.png",
title=t(_("Cannot verify: Submitted by current user")))
return item
def __call__(self):
if getSecurityManager().checkPermission(ManageKits, self.context):
self.show_select_row = True
self.show_select_column = True
return BikaListingView.__call__(self)
def folderitems(self, full_objects=False, classic=False):
# We need to get the portal catalog here in roder to save process
# while iterating over folderitems
self.portal_catalog = api.get_tool("portal_catalog")
return BikaListingView.folderitems(self, full_objects, classic)
def __init__(self, context, request, fieldvalue=[], allow_edit=True):
BikaListingView.__init__(self, context, request)
self.context_actions = {}
self.contentFilter = {
'inactive_state': 'active',
'sort_on': 'sortable_title'
}
self.context_actions = {}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url
self.show_sort_column = False
self.show_select_row = False
self.show_select_all_checkbox = False
self.show_select_column = False
self.pagesize = 999999
self.allow_edit = allow_edit
self.show_categories = True
# self.expand_all_categories = False
self.ajax_categories = True
self.ajax_categories_url = self.context.absolute_url(
) + "/analysis_spec_widget_view"
self.category_index = 'getCategoryTitle'
self.specsresults = {}
for specresults in fieldvalue:
self.specsresults[specresults['keyword']] = specresults
self.columns = {
'service': {
'title': _('Service'),
'index': 'sortable_title',
'sortable': False
},
'min': {
'title': _('Min'),
'sortable': False,
},
'max': {
'title': _('Max'),
'sortable': False,
},
'error': {
'title': _('Permitted Error %'),
'sortable': False
},
'hidemin': {
'title': _('< Min'),
'sortable': False
},
'hidemax': {
'title': _('> Max'),
'sortable': False
},
'rangecomment': {
'title': _('Range comment'),
'sortable': False,
'toggle': False
}
}
self.review_states = [
{
'id':
'default',
'title':
_('All'),
'contentFilter': {},
'transitions': [],
'columns': [
'service', 'min', 'max', 'error', 'hidemin', 'hidemax',
'rangecomment'
],
},
]
def __init__(self, context, request, **kwargs):
BikaListingView.__init__(
self,
context,
request,
show_categories=context.bika_setup.getCategoriseAnalysisServices(),
expand_all_categories=True)
# prepare the content filter of this listing
self.contentFilter = dict(kwargs)
self.contentFilter.update({
"portal_type": "Analysis",
"sort_on": "sortable_title",
"sort_order": "ascending",
})
# set the listing view config
self.catalog = CATALOG_ANALYSIS_LISTING
self.sort_order = 'ascending'
self.context_actions = {}
self.show_sort_column = False
self.show_select_row = False
self.show_select_column = False
self.show_column_toggles = False
self.pagesize = 999999
self.form_id = 'analyses_form'
self.context_active = isActive(context)
self.interim_fields = {}
self.interim_columns = OrderedDict()
self.specs = {}
self.bsc = getToolByName(context, 'bika_setup_catalog')
self.portal = getToolByName(context, 'portal_url').getPortalObject()
self.portal_url = self.portal.absolute_url()
self.rc = getToolByName(context, REFERENCE_CATALOG)
self.dmk = context.bika_setup.getResultsDecimalMark()
self.scinot = context.bika_setup.getScientificNotationResults()
self.categories = []
request.set('disable_plone.rightcolumn', 1)
# each editable item needs it's own allow_edit
# which is a list of field names.
self.allow_edit = False
self.columns = {
# Although 'created' column is not displayed in the list (see
# review_states to check the columns that will be rendered), this
# column is needed to sort the list by create date
'created': {
'title': _('Date Created'),
'toggle': False},
'Service': {
'title': _('Analysis'),
'attr': 'Title',
'index': 'sortable_title',
'sortable': False},
'Partition': {
'title': _("Partition"),
'attr': 'getSamplePartitionID',
'sortable': False},
'Method': {
'title': _('Method'),
'sortable': False,
'toggle': True},
'Instrument': {
'title': _('Instrument'),
'sortable': False,
'toggle': True},
'Analyst': {
'title': _('Analyst'),
'sortable': False,
'toggle': True},
'state_title': {
'title': _('Status'),
'sortable': False},
'DetectionLimit': {
'title': _('DL'),
'sortable': False,
'toggle': False},
'Result': {
'title': _('Result'),
'input_width': '6',
'input_class': 'ajax_calculate numeric',
'sortable': False},
'Specification': {
'title': _('Specification'),
'sortable': False},
'Uncertainty': {
'title': _('+-'),
'sortable': False},
'retested': {
'title': "<img title='%s' "
"src='%s/++resource++bika.lims.images/retested.png"
"'/>" % \
(t(_('Retested')), self.portal_url),
'type': 'boolean',
'sortable': False},
'Attachments': {
'title': _('Attachments'),
'sortable': False},
'CaptureDate': {
'title': _('Captured'),
'index': 'getResultCaptureDate',
'sortable': False},
'DueDate': {
'title': _('Due Date'),
'index': 'getDueDate',
'sortable': False},
'Hidden': {
'title': _('Hidden'),
'toggle': True,
'sortable': False,
'input_class': 'autosave',
'type': 'boolean'},
}
self.review_states = [
{
'id':
'default',
'title':
_('All'),
'contentFilter': {},
'columns': [
'Service', 'Partition', 'DetectionLimit', 'Result',
'Specification', 'Method', 'Instrument', 'Analyst',
'Uncertainty', 'CaptureDate', 'DueDate', 'state_title',
'Hidden'
]
},
]
if not context.bika_setup.getShowPartitions():
self.review_states[0]['columns'].remove('Partition')
# This is used to display method and instrument columns if there is at
# least one analysis to be rendered that allows the assignment of method
# and/or instrument
self.show_methodinstr_columns = False
def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.icon = self.portal_url + "/++resource++bika.lims.images/worksheet_big.png"
self.title = self.context.translate(_("Add Analyses"))
self.description = ""
self.catalog = CATALOG_ANALYSIS_LISTING
self.context_actions = {}
# initial review state for first form display of the worksheet
# add_analyses search view - first batch of analyses, latest first.
self.sort_on = 'Priority'
self.contentFilter = {
'portal_type': 'Analysis',
'review_state': 'sample_received',
'worksheetanalysis_review_state': 'unassigned',
'sort_on': 'getPrioritySortkey',
'cancellation_state': 'active'
}
self.base_url = self.context.absolute_url()
self.view_url = self.base_url + "/add_analyses"
self.show_sort_column = False
self.show_select_row = False
self.show_select_column = True
self.pagesize = 50
self.columns = {
'Priority': {
'title': '',
'sortable': True,
'index': 'getPrioritySortkey'
},
'Client': {
'title': _('Client'),
'attr': 'getClientTitle',
'replace_url': 'getClientURL',
'index': 'getClientTitle'
},
'getClientOrderNumber': {
'title': _('Order'),
'index': 'getClientOrderNumber'
},
'getRequestID': {
'title': _('Request ID'),
'attr': 'getRequestID',
'replace_url': 'getRequestURL',
'index': 'getRequestID'
},
'CategoryTitle': {
'title': _('Category'),
'attr': 'getCategoryTitle',
'sortable': False
},
'Title': {
'title': _('Analysis'),
'index': 'getId'
},
'getDateReceived': {
'title': _('Date Received'),
'index': 'getDateReceived'
},
'getDueDate': {
'title': _('Due Date'),
'index': 'getDueDate'
},
}
self.filter_indexes = [
'Title',
]
self.review_states = [
{
'id':
'default',
'title':
_('All'),
'contentFilter': {},
'transitions': [
{
'id': 'assign'
},
],
'columns': [
'Priority', 'Client', 'getClientOrderNumber',
'getRequestID', 'CategoryTitle', 'Title',
'getDateReceived', 'getDueDate'
],
},
]
def folderitems(self):
return BikaListingView.folderitems(self, classic=False)
def __init__(self, context, request):
BikaListingView.__init__(self, context, request)
self.context = context
self.request = request
self.catalog = 'bika_catalog'
request.set('disable_plone.rightcolumn', 1)
self.contentFilter = {
'portal_type': 'Kit',
'sort_on': 'sortable_title',
'sort_order': 'reverse'
}
# Todo: I added these two line to set the sort and the order of kit listing because
# Todo: the values in self.contentFilter seems have no effect!
self.sort_on = 'sortable_title'
self.request.set('list_sort_order', 'reverse')
self.context_actions = {}
self.title = self.context.translate(_("Kits"))
self.icon = self.portal_url + \
"/++resource++baobab.lims.images/kit_big.png"
self.description = ''
self.show_sort_column = False
self.show_select_row = False
self.show_select_column = False
self.pagesize = 25
if self.context.portal_type == 'Kits':
self.request.set('disable_border', 1)
self.columns = {
'Title': {
'title': _('Kit Name')
},
'Project': {
'title': _('Project'),
'toggle': True
},
'kitTemplate': {
'title': _('Kit template'),
'toggle': True
},
'state_title': {
'title': _('State'),
'index': 'review_state'
},
'sortable_title': {}
}
self.review_states = [
{
'id':
'default',
'title':
_('Active'),
'contentFilter': {
'inactive_state': 'active',
},
'transitions': [
{
'id': 'deactivate'
},
{
'id': 'receive_kit'
},
{
'id': 'process'
},
# {'id': 'ship'}
],
'columns': ['Title', 'Project', 'kitTemplate', 'state_title']
},
{
'id': 'shipped',
'title': _('Shipped'),
'contentFilter': {
'review_state': 'shipped',
'sort_on': 'sortable_title',
'sort_order': 'reverse'
},
'transitions': [{
'id': 'deactivate'
}, {
'id': 'receive_kit'
}],
'columns': ['Title', 'Project', 'kitTemplate', 'state_title']
},
{
'id': 'received',
'title': _('Received'),
'contentFilter': {
'review_state': 'received',
'sort_on': 'sortable_title',
'sort_order': 'reverse'
},
'transitions': [{
'id': 'deactivate'
}, {
'id': 'process'
}],
'columns': ['Title', 'Project', 'kitTemplate', 'state_title']
},
{
'id': 'processed',
'title': _('Processed'),
'contentFilter': {
'review_state': 'processed',
'sort_on': 'sortable_title',
'sort_order': 'reverse'
},
'transitions': [{
'id': 'deactivate'
}],
'columns': ['Title', 'Project', 'kitTemplate', 'state_title']
},
{
'id': 'all',
'title': _('All'),
'contentFilter': {
'sort_on': 'sortable_title',
'sort_order': 'reverse'
},
'columns': ['Title', 'Project', 'kitTemplate', 'state_title']
},
]
def folderitem(self, obj, item, index):
# Additional info from AnalysisRequest to be added in the item
# generated by default by bikalisting.
# Call the folderitem method from the base class
item = BikaListingView.folderitem(self, obj, item, index)
if not item:
return None
# This variable will contain the full analysis request if there is
# need to work with the full object instead of the brain
full_object = None
item["Creator"] = self.user_fullname(obj.Creator)
# If we redirect from the folderitems view we should check if the
# user has permissions to medify the element or not.
priority_sort_key = obj.getPrioritySortkey
if not priority_sort_key:
# Default priority is Medium = 3.
# The format of PrioritySortKey is <priority>.<created>
priority_sort_key = "3.%s" % obj.created.ISO8601()
priority = priority_sort_key.split(".")[0]
priority_text = PRIORITIES.getValue(priority)
priority_div = """<div class="priority-ico priority-%s">
<span class="notext">%s</span><div>
"""
item["replace"]["Priority"] = priority_div % (priority, priority_text)
item["replace"]["getProfilesTitle"] = obj.getProfilesTitleStr
analysesnum = obj.getAnalysesNum
if analysesnum:
num_verified = str(analysesnum[0])
num_total = str(analysesnum[1])
item["getAnalysesNum"] = "{0}/{1}".format(num_verified, num_total)
else:
item["getAnalysesNum"] = ""
# Progress
progress_perc = self.get_progress_percentage(obj)
item["replace"]["Progress"] = get_progress_bar_html(progress_perc)
item["BatchID"] = obj.getBatchID
if obj.getBatchID:
item['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(obj.getBatchURL, obj.getBatchID)
# TODO: SubGroup ???
# val = obj.Schema().getField('SubGroup').get(obj)
# item['SubGroup'] = val.Title() if val else ''
date = obj.getSamplingDate
item["SamplingDate"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDateReceived
item["getDateReceived"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDueDate
item["getDueDate"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDatePublished
item["getDatePublished"] = \
self.ulocalized_time(date, long_format=1) if date else ""
date = obj.getDateVerified
item["getDateVerified"] = \
self.ulocalized_time(date, long_format=1) if date else ""
if self.printwfenabled:
item["Printed"] = ""
printed = obj.getPrinted if hasattr(obj, "getPrinted") else "0"
print_icon = ""
if printed == "0":
print_icon = get_image("delete.png",
title=t(_("Not printed yet")))
elif printed == "1":
print_icon = get_image("ok.png", title=t(_("Printed")))
elif printed == "2":
print_icon = get_image("exclamation.png",
title=t(
_("Republished after last print")))
item["after"]["Printed"] = print_icon
item["SamplingDeviation"] = obj.getSamplingDeviationTitle
item["getStorageLocation"] = obj.getStorageLocationTitle
after_icons = ""
# Getting a dictionary with each workflow id and current state in it
states_dict = obj.getObjectWorkflowStates
if obj.assigned_state == 'assigned':
after_icons += get_image("worksheet.png",
title=t(_("All analyses assigned")))
if states_dict.get('review_state', '') == 'invalid':
after_icons += get_image("delete.png",
title=t(_("Results have been withdrawn")))
due_date = obj.getDueDate
if due_date and due_date < (obj.getDatePublished or DateTime()):
due_date_str = self.ulocalized_time(due_date)
img_title = "{}: {}".format(t(_("Late Analyses")), due_date_str)
after_icons += get_image("late.png", title=img_title)
if obj.getSamplingDate and obj.getSamplingDate > DateTime():
after_icons += get_image("calendar.png",
title=t(_("Future dated sample")))
if obj.getInvoiceExclude:
after_icons += get_image("invoice_exclude.png",
title=t(_("Exclude from invoice")))
if obj.getHazardous:
after_icons += get_image("hazardous.png", title=t(_("Hazardous")))
if after_icons:
item['after']['getId'] = after_icons
item['Created'] = self.ulocalized_time(obj.created, long_format=1)
if obj.getContactUID:
item['ClientContact'] = obj.getContactFullName
item['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(obj.getContactURL, obj.getContactFullName)
else:
item["ClientContact"] = ""
# TODO-performance: If SamplingWorkflowEnabled, we have to get the
# full object to check the user permissions, so far this is
# a performance hit.
if obj.getSamplingWorkflowEnabled:
# We don't do anything with Sampling Date.
# User can modify Sampling date
# inside AR view. In this listing view,
# we only let the user to edit Date Sampled
# and Sampler if he wants to make 'sample' transaction.
if not obj.getDateSampled:
datesampled = self.ulocalized_time(DateTime(),
long_format=True)
item["class"]["getDateSampled"] = "provisional"
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = obj.getSampler
if sampler:
item["replace"]["getSampler"] = obj.getSamplerFullName
if "Sampler" in self.roles and not sampler:
sampler = self.member.id
item["class"]["getSampler"] = "provisional"
# sampling workflow - inline edits for Sampler and Date Sampled
if states_dict.get('review_state', '') == 'to_be_sampled':
# We need to get the full object in order to check
# the permissions
full_object = obj.getObject()
checkPermission =\
self.context.portal_membership.checkPermission
# TODO Do we really need this check?
if checkPermission(TransitionSampleSample, full_object):
item["required"] = ["getSampler", "getDateSampled"]
item["allow_edit"] = ["getSampler", "getDateSampled"]
# TODO-performance: hit performance while getting the
# sample object...
# TODO Can LabManagers be a Sampler?!
samplers = getUsers(full_object, [
"Sampler",
])
username = self.member.getUserName()
users = [({
"ResultValue": u,
"ResultText": samplers.getValue(u)
}) for u in samplers]
item['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
sampler = Sampler
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = obj.getSamplerFullName if obj.getSampler else ''
else:
datesampled = self.ulocalized_time(obj.getDateSampled,
long_format=True)
sampler = ""
item["getDateSampled"] = datesampled
item["getSampler"] = sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
item["getPreserver"] = ""
item["getDatePreserved"] = ""
# Advanced partitioning
# append the UID of the primary AR as parent
item["parent"] = obj.getRawParentAnalysisRequest or ""
# append partition UIDs of this AR as children
item["children"] = obj.getDescendantsUIDs or []
return item
def folderitems(self, full_objects=False, classic=False):
"""We add this function to tell baselisting to use brains instead of
full objects"""
items = BikaListingView.folderitems(self, full_objects, classic)
return sorted(items, key=lambda item: item["position"])
def folderitems(self, full_objects = False):
workflow = getToolByName(self.context, "portal_workflow")
items = BikaListingView.folderitems(self)
mtool = getToolByName(self.context, 'portal_membership')
member = mtool.getAuthenticatedMember()
translate = self.context.translate
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['replace']['getSampleID'] = "<a href='%s'>%s</a>" % \
(items[x]['url'], obj.getSampleID())
items[x]['replace']['Requests'] = ",".join(
["<a href='%s'>%s</a>" % (o.absolute_url(), o.Title())
for o in obj.getAnalysisRequests()])
items[x]['Client'] = obj.aq_parent.Title()
if hideclientlink == False:
items[x]['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
items[x]['Creator'] = self.user_fullname(obj.Creator())
items[x]['DateReceived'] = self.ulocalized_time(obj.getDateReceived())
deviation = obj.getSamplingDeviation()
items[x]['SamplingDeviation'] = deviation and deviation.Title() or ''
items[x]['getStorageLocation'] = obj.getStorageLocation() and obj.getStorageLocation().Title() or ''
items[x]['AdHoc'] = obj.getAdHoc() and True or ''
items[x]['Created'] = self.ulocalized_time(obj.created())
samplingdate = obj.getSamplingDate()
items[x]['getSamplingDate'] = self.ulocalized_time(samplingdate, long_format=1)
after_icons = ''
if obj.getSampleType().getHazardous():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/hazardous.png'>" % \
(t(_("Hazardous")),
self.portal_url)
if obj.getSamplingDate() > DateTime():
after_icons += "<img title='%s' " \
"src='%s/++resource++bika.lims.images/calendar.png' >" % \
(t(_("Future dated sample")),
self.portal_url)
if after_icons:
items[x]['after']['getSampleID'] = after_icons
SamplingWorkflowEnabled =\
self.context.bika_setup.getSamplingWorkflowEnabled()
if not samplingdate > DateTime() \
and SamplingWorkflowEnabled:
datesampled = self.ulocalized_time(obj.getDateSampled())
if not datesampled:
datesampled = self.ulocalized_time(DateTime())
items[x]['class']['getDateSampled'] = 'provisional'
sampler = obj.getSampler().strip()
if sampler:
items[x]['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
items[x]['class']['getSampler'] = 'provisional'
else:
datesampled = ''
sampler = ''
items[x]['getDateSampled'] = datesampled
items[x]['getSampler'] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = workflow.getInfoFor(obj, 'review_state')
if state == 'to_be_sampled' \
and checkPermission(SampleSample, obj) \
and not samplingdate > DateTime():
items[x]['required'] = ['getSampler', 'getDateSampled']
items[x]['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
for u in samplers]
items[x]['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
items[x]['getSampler'] = Sampler
# These don't exist on samples
# the columns exist just to set "preserve" transition from lists.
# XXX This should be a list of preservers...
items[x]['getPreserver'] = ''
items[x]['getDatePreserved'] = ''
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] = ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = self.context.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
items[x]['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
items[x]['getPreserver'] = preserver
items[x]['getDatePreserved'] = self.ulocalized_time(DateTime())
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
# Hide Preservation/Sampling workflow actions if the edit columns
# are not displayed.
toggle_cols = self.get_toggle_cols()
new_states = []
for i,state in enumerate(self.review_states):
if state['id'] == self.review_state:
if 'getSampler' not in toggle_cols \
or 'getDateSampled' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('sample')
else:
state['hide_transitions'] = ['sample',]
if 'getPreserver' not in toggle_cols \
or 'getDatePreserved' not in toggle_cols:
if 'hide_transitions' in state:
state['hide_transitions'].append('preserve')
else:
state['hide_transitions'] = ['preserve',]
new_states.append(state)
self.review_states = new_states
return items
def folderitems(self):
wf = getToolByName(self, 'portal_workflow')
rc = getToolByName(self, REFERENCE_CATALOG)
pm = getToolByName(self.context, "portal_membership")
member = pm.getAuthenticatedMember()
# Only show "my" worksheets
# this cannot be setup in contentFilter,
# because AuthenticatedMember is not available in __init__
cookie = json.loads(self.request.get("review_state", '{}'))
cookie_key = "%s%s" % (self.context.portal_type, self.form_id)
# POST
selected_state = self.request.get("%s_review_state"%self.form_id, '')
if not selected_state:
# cookie
selected_state = cookie.get(cookie_key, '')
if selected_state == 'mine':
# modify contentFolter for current state
new_review_states = []
for state in self.review_states:
if state['id'] == 'mine':
state['contentFilter']['getAnalyst'] = member.getId()
else:
new_review_states.append(state)
self.review_states = new_review_states
items = BikaListingView.folderitems(self)
new_items = []
analyst_choices = []
for a in self.analysts:
analyst_choices.append({'ResultValue': a,
'ResultText': self.analysts.getValue(a)})
can_reassign = False
for x in range(len(items)):
if not items[x].has_key('obj'):
new_items.append(items[x])
continue
obj = items[x]['obj']
review_state = wf.getInfoFor(obj, 'review_state')
analyst = obj.getAnalyst().strip()
creator = obj.Creator().strip()
items[x]['Analyst'] = analyst
instrument = obj.getInstrument()
items[x]['Instrument'] = instrument and instrument.Title() or ''
items[x]['Title'] = obj.Title()
wst = obj.getWorksheetTemplate()
items[x]['Template'] = wst and wst.Title() or ''
if wst:
items[x]['replace']['Template'] = "<a href='%s'>%s</a>" % \
(wst.absolute_url(), wst.Title())
items[x]['CreationDate'] = self.ulocalized_time(obj.creation_date)
nr_analyses = len(obj.getAnalyses())
if nr_analyses == '0':
# manager and labmanager see *all* worksheets
# otherwise we must be Analyst or Creator to see empties.
roles = member.getRoles()
if not 'Manager' in roles \
and not 'LabManager' in roles \
and not member.getId() in (analyst, creator):
continue
# give empties pretty classes.
items[x]['table_row_class'] = 'state-empty-worksheet'
layout = obj.getLayout()
if len(layout) > 0:
items[x]['replace']['Title'] = "<a href='%s/manage_results'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
else:
items[x]['replace']['Title'] = "<a href='%s/add_analyses'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
# set Services
ws_services = {}
for slot in [s for s in layout if s['type'] == 'a']:
analysis = rc.lookupObject(slot['analysis_uid'])
service = analysis.getService()
title = service.Title()
if title not in ws_services:
ws_services[title] = "<a href='%s'>%s,</a>" % \
(service.absolute_url(), title)
keys = list(ws_services.keys())
keys.sort()
services = []
for key in keys:
services.append(ws_services[key])
if services:
services[-1] = services[-1].replace(",", "")
items[x]['Services'] = ""
items[x]['replace']['Services'] = " ".join(services)
# set Sample Types
pos_parent = {}
for slot in layout:
if slot['position'] in pos_parent:
continue
pos_parent[slot['position']] = rc.lookupObject(slot['container_uid'])
sampletypes = {}
blanks = {}
controls = {}
for container in pos_parent.values():
if container.portal_type == 'AnalysisRequest':
sampletypes["<a href='%s'>%s,</a>" % \
(container.getSample().getSampleType().absolute_url(),
container.getSample().getSampleType().Title())] = 1
if container.portal_type == 'ReferenceSample' and container.getBlank():
blanks["<a href='%s'>%s,</a>" % \
(container.absolute_url(),
container.Title())] = 1
if container.portal_type == 'ReferenceSample' and not container.getBlank():
controls["<a href='%s'>%s,</a>" % \
(container.absolute_url(),
container.Title())] = 1
sampletypes = list(sampletypes.keys())
sampletypes.sort()
blanks = list(blanks.keys())
blanks.sort()
controls = list(controls.keys())
controls.sort()
# remove trailing commas
if sampletypes:
sampletypes[-1] = sampletypes[-1].replace(",", "")
if controls:
controls[-1] = controls[-1].replace(",", "")
else:
if blanks:
blanks[-1] = blanks[-1].replace(",", "")
items[x]['SampleTypes'] = ""
items[x]['replace']['SampleTypes'] = " ".join(sampletypes)
items[x]['QC'] = ""
items[x]['replace']['QC'] = " ".join(blanks + controls)
if items[x]['review_state'] == 'open':
items[x]['allow_edit'] = ['Analyst', ]
items[x]['required'] = ['Analyst', ]
can_reassign = True
items[x]['choices'] = {'Analyst': analyst_choices}
new_items.append(items[x])
if can_reassign:
for x in range(len(self.review_states)):
if self.review_states[x]['id'] in ['default', 'mine', 'open']:
self.review_states[x]['custom_actions'] = [{'id': 'reassign', 'title': _('Reassign')}, ]
return new_items
def folderitem(self, obj, item, index):
# Additional info from AnalysisRequest to be added in the item generated
# by default by bikalisting.
# Call the folderitem method from the base class
item = BikaListingView.folderitem(self, obj, item, index)
if not item:
return None
member = self.mtool.getAuthenticatedMember()
roles = member.getRoles()
hideclientlink = 'RegulatoryInspector' in roles \
and 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles
sample = obj.getSample()
url = obj.absolute_url()
if getSecurityManager().checkPermission(EditResults, obj):
url += "/manage_results"
item['Client'] = obj.aq_parent.Title()
if (hideclientlink == False):
item['replace']['Client'] = "<a href='%s'>%s</a>" % \
(obj.aq_parent.absolute_url(), obj.aq_parent.Title())
item['Creator'] = self.user_fullname(obj.Creator())
item['getRequestID'] = obj.getRequestID()
item['replace']['getRequestID'] = "<a href='%s'>%s</a>" % \
(url, item['getRequestID'])
item['getSample'] = sample
item['replace']['getSample'] = \
"<a href='%s'>%s</a>" % (sample.absolute_url(), sample.Title())
item['replace']['getProfilesTitle'] = ", ".join(
[p.Title() for p in obj.getProfiles()])
analysesnum = obj.getAnalysesNum()
if analysesnum:
item['getAnalysesNum'] = str(analysesnum[0]) + '/' + str(
analysesnum[1])
else:
item['getAnalysesNum'] = ''
batch = obj.getBatch()
if batch:
item['BatchID'] = batch.getBatchID()
item['replace']['BatchID'] = "<a href='%s'>%s</a>" % \
(batch.absolute_url(), item['BatchID'])
else:
item['BatchID'] = ''
val = obj.Schema().getField('SubGroup').get(obj)
item['SubGroup'] = val.Title() if val else ''
sd = obj.getSample().getSamplingDate()
item['SamplingDate'] = \
self.ulocalized_time(sd, long_format=1) if sd else ''
item['getDateReceived'] = self.ulocalized_time(obj.getDateReceived())
item['getDatePublished'] = self.ulocalized_time(obj.getDatePublished())
item['getDateVerified'] = getTransitionDate(obj, 'verify')
deviation = sample.getSamplingDeviation()
item['SamplingDeviation'] = deviation and deviation.Title() or ''
priority = obj.getPriority()
item['Priority'] = '' # priority.Title()
item['getStorageLocation'] = sample.getStorageLocation(
) and sample.getStorageLocation().Title() or ''
item['AdHoc'] = sample.getAdHoc() and True or ''
after_icons = ""
state = self.workflow.getInfoFor(obj, 'worksheetanalysis_review_state')
if state == 'assigned':
after_icons += "<img src='%s/++resource++bika.lims.images/worksheet.png' title='%s'/>" % \
(self.portal_url, t(_("All analyses assigned")))
if self.workflow.getInfoFor(obj, 'review_state') == 'invalid':
after_icons += "<img src='%s/++resource++bika.lims.images/delete.png' title='%s'/>" % \
(self.portal_url, t(_("Results have been withdrawn")))
if obj.getLate():
after_icons += "<img src='%s/++resource++bika.lims.images/late.png' title='%s'>" % \
(self.portal_url, t(_("Late Analyses")))
if sd and sd > DateTime():
after_icons += "<img src='%s/++resource++bika.lims.images/calendar.png' title='%s'>" % \
(self.portal_url, t(_("Future dated sample")))
if obj.getInvoiceExclude():
after_icons += "<img src='%s/++resource++bika.lims.images/invoice_exclude.png' title='%s'>" % \
(self.portal_url, t(_("Exclude from invoice")))
if sample.getSampleType().getHazardous():
after_icons += "<img src='%s/++resource++bika.lims.images/hazardous.png' title='%s'>" % \
(self.portal_url, t(_("Hazardous")))
if after_icons:
item['after']['getRequestID'] = after_icons
item['Created'] = self.ulocalized_time(obj.created())
contact = obj.getContact()
if contact:
item['ClientContact'] = contact.Title()
item['replace']['ClientContact'] = "<a href='%s'>%s</a>" % \
(contact.absolute_url(), contact.Title())
else:
item['ClientContact'] = ""
SamplingWorkflowEnabled = sample.getSamplingWorkflowEnabled()
if SamplingWorkflowEnabled and (not sd or not sd > DateTime()):
datesampled = self.ulocalized_time(sample.getDateSampled(),
long_format=True)
if not datesampled:
datesampled = self.ulocalized_time(DateTime(),
long_format=True)
item['class']['getDateSampled'] = 'provisional'
sampler = sample.getSampler().strip()
if sampler:
item['replace']['getSampler'] = self.user_fullname(sampler)
if 'Sampler' in member.getRoles() and not sampler:
sampler = member.id
item['class']['getSampler'] = 'provisional'
else:
datesampled = ''
sampler = ''
item['getDateSampled'] = datesampled
item['getSampler'] = sampler
# sampling workflow - inline edits for Sampler and Date Sampled
checkPermission = self.context.portal_membership.checkPermission
state = self.workflow.getInfoFor(obj, 'review_state')
if state == 'to_be_sampled' \
and checkPermission(SampleSample, obj) \
and (not sd or not sd > DateTime()):
item['required'] = ['getSampler', 'getDateSampled']
item['allow_edit'] = ['getSampler', 'getDateSampled']
samplers = getUsers(sample, ['Sampler', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({
'ResultValue': u,
'ResultText': samplers.getValue(u)
}) for u in samplers]
item['choices'] = {'getSampler': users}
Sampler = sampler and sampler or \
(username in samplers.keys() and username) or ''
item['getSampler'] = Sampler
# These don't exist on ARs
# XXX This should be a list of preservers...
item['getPreserver'] = ''
item['getDatePreserved'] = ''
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
item['required'] = ['getPreserver', 'getDatePreserved']
item['allow_edit'] = ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
username = member.getUserName()
users = [({
'ResultValue': u,
'ResultText': preservers.getValue(u)
}) for u in preservers]
item['choices'] = {'getPreserver': users}
preserver = username in preservers.keys() and username or ''
item['getPreserver'] = preserver
item['getDatePreserved'] = self.ulocalized_time(DateTime(),
long_format=1)
item['class']['getPreserver'] = 'provisional'
item['class']['getDatePreserved'] = 'provisional'
# Submitting user may not verify results
if item['review_state'] == 'to_be_verified' and \
not checkPermission(VerifyOwnResults, obj):
self_submitted = False
try:
review_history = list(
self.workflow.getInfoFor(obj, 'review_history'))
review_history.reverse()
for event in review_history:
if event.get('action') == 'submit':
if event.get('actor') == member.getId():
self_submitted = True
break
if self_submitted:
item['after']['state_title'] = \
"<img src='++resource++bika.lims.images/submitted-by-current-user.png' title='%s'/>" % \
t(_("Cannot verify: Submitted by current user"))
except Exception:
pass
return item
def folderitems(self):
wf = getToolByName(self, 'portal_workflow')
rc = getToolByName(self, REFERENCE_CATALOG)
pm = getToolByName(self.context, "portal_membership")
self.member = pm.getAuthenticatedMember()
roles = self.member.getRoles()
self.restrict_results = 'Manager' not in roles \
and 'LabManager' not in roles \
and 'LabClerk' not in roles \
and 'RegulatoryInspector' not in roles \
and self.context.bika_setup.getRestrictWorksheetUsersAccess()
if self.restrict_results == True:
# Remove 'Mine' button and hide 'Analyst' column
del self.review_states[1] # Mine
self.columns['Analyst']['toggle'] = False
can_manage = pm.checkPermission(ManageWorksheets, self.context)
self.selected_state = self.request.get(
"%s_review_state" % self.form_id, 'default')
items = BikaListingView.folderitems(self)
new_items = []
analyst_choices = []
for a in self.analysts:
analyst_choices.append({
'ResultValue': a,
'ResultText': self.analysts.getValue(a)
})
can_reassign = False
self.allow_edit = self.isEditionAllowed()
for x in range(len(items)):
if not items[x].has_key('obj'):
new_items.append(items[x])
continue
obj = items[x]['obj']
analyst = obj.getAnalyst().strip()
creator = obj.Creator().strip()
items[x]['Analyst'] = analyst
priority = obj.getPriority()
items[x]['Priority'] = ''
instrument = obj.getInstrument()
items[x]['Instrument'] = instrument and instrument.Title() or ''
items[x]['Title'] = obj.Title()
wst = obj.getWorksheetTemplate()
items[x]['Template'] = wst and wst.Title() or ''
if wst:
items[x]['replace']['Template'] = "<a href='%s'>%s</a>" % \
(wst.absolute_url(), wst.Title())
items[x]['getPriority'] = ''
items[x]['CreationDate'] = self.ulocalized_time(obj.creation_date)
nr_analyses = len(obj.getAnalyses())
if nr_analyses == '0':
# give empties pretty classes.
items[x]['table_row_class'] = 'state-empty-worksheet'
layout = obj.getLayout()
if len(layout) > 0:
items[x]['replace']['Title'] = "<a href='%s/manage_results'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
else:
items[x]['replace']['Title'] = "<a href='%s/add_analyses'>%s</a>" % \
(items[x]['url'], items[x]['Title'])
# set Services
ws_services = {}
for slot in [s for s in layout if s['type'] == 'a']:
analysis = rc.lookupObject(slot['analysis_uid'])
service = analysis.getService()
title = service.Title()
if title not in ws_services:
ws_services[title] = "<a href='%s'>%s,</a>" % \
(service.absolute_url(), title)
keys = list(ws_services.keys())
keys.sort()
services = []
for key in keys:
services.append(ws_services[key])
if services:
services[-1] = services[-1].replace(",", "")
items[x]['Services'] = ""
items[x]['replace']['Services'] = " ".join(services)
# set Sample Types
pos_parent = {}
for slot in layout:
# compensate for bad data caused by a stupid bug.
if type(slot['position']) in (list, tuple):
slot['position'] = slot['position'][0]
if slot['position'] == 'new':
continue
if slot['position'] in pos_parent:
continue
pos_parent[slot['position']] = rc.lookupObject(
slot['container_uid'])
sampletypes = {}
blanks = {}
controls = {}
for container in pos_parent.values():
if container.portal_type == 'AnalysisRequest':
sampletypes["<a href='%s'>%s,</a>" % \
(container.getSample().getSampleType().absolute_url(),
container.getSample().getSampleType().Title())] = 1
if container.portal_type == 'ReferenceSample' and container.getBlank(
):
blanks["<a href='%s'>%s,</a>" % \
(container.absolute_url(),
container.Title())] = 1
if container.portal_type == 'ReferenceSample' and not container.getBlank(
):
controls["<a href='%s'>%s,</a>" % \
(container.absolute_url(),
container.Title())] = 1
sampletypes = list(sampletypes.keys())
sampletypes.sort()
blanks = list(blanks.keys())
blanks.sort()
controls = list(controls.keys())
controls.sort()
# remove trailing commas
if sampletypes:
sampletypes[-1] = sampletypes[-1].replace(",", "")
if controls:
controls[-1] = controls[-1].replace(",", "")
else:
if blanks:
blanks[-1] = blanks[-1].replace(",", "")
items[x]['SampleTypes'] = ""
items[x]['replace']['SampleTypes'] = " ".join(sampletypes)
items[x]['QC'] = ""
items[x]['replace']['QC'] = " ".join(blanks + controls)
items[x]['QCTotals'] = ''
# Get all Worksheet QC Analyses
totalQCAnalyses = [
a for a in obj.getAnalyses()
if a.portal_type == 'ReferenceAnalysis'
or a.portal_type == 'DuplicateAnalysis'
]
totalQCSamples = []
# Get all Worksheet QC samples
for analysis in totalQCAnalyses:
if analysis.getSample().UID() not in totalQCSamples:
totalQCSamples.append(analysis.getSample().UID())
# Total QC Samples (Total Routine Analyses)
items[x]['QCTotals'] = str(len(totalQCSamples)) + '(' + str(
len(totalQCAnalyses)) + ')'
totalRoutineAnalyses = [
a for a in obj.getAnalyses() if a not in totalQCAnalyses
]
totalRoutineSamples = []
for analysis in totalRoutineAnalyses:
if analysis.getSample().UID() not in totalRoutineSamples:
totalRoutineSamples.append(analysis.getSample().UID())
# Total Routine Samples (Total Routine Analyses)
items[x]['RoutineTotals'] = str(
len(totalRoutineSamples)) + '(' + str(
len(totalRoutineAnalyses)) + ')'
if items[x]['review_state'] == 'open' \
and self.allow_edit \
and self.restrict_results == False \
and can_manage == True:
items[x]['allow_edit'] = [
'Analyst',
]
items[x]['required'] = [
'Analyst',
]
can_reassign = True
items[x]['choices'] = {'Analyst': analyst_choices}
new_items.append(items[x])
if can_reassign:
for x in range(len(self.review_states)):
if self.review_states[x]['id'] in ['default', 'mine', 'open']:
self.review_states[x]['custom_actions'] = [
{
'id': 'reassign',
'title': _('Reassign')
},
]
self.show_select_column = can_reassign
self.show_workflow_action_buttons = can_reassign
return new_items
def folderitems(self):
self.categories = []
analyses = self.context.getAnalyses(full_objects=True)
self.analyses = dict([(a.getServiceUID(), a) for a in analyses])
self.selected = self.analyses.keys()
self.show_categories = \
self.context.bika_setup.getCategoriseAnalysisServices()
self.expand_all_categories = False
wf = getToolByName(self.context, 'portal_workflow')
mtool = getToolByName(self.context, 'portal_membership')
self.allow_edit = mtool.checkPermission('Modify portal content',
self.context)
items = BikaListingView.folderitems(self)
analyses = self.context.getAnalyses(full_objects=True)
parts = self.context.getSample().objectValues('SamplePartition')
partitions = [{
'ResultValue': o.Title(),
'ResultText': o.getId()
} for o in parts
if wf.getInfoFor(o, 'cancellation_state', '') == 'active'
]
for x in range(len(items)):
if not 'obj' in items[x]:
continue
obj = items[x]['obj']
cat = obj.getCategoryTitle()
items[x]['category'] = cat
if cat not in self.categories:
self.categories.append(cat)
items[x]['selected'] = items[x]['uid'] in self.selected
items[x]['class']['Title'] = 'service_title'
# js checks in row_data if an analysis may be removed.
row_data = {}
# keyword = obj.getKeyword()
# if keyword in review_states.keys() \
# and review_states[keyword] not in ['sample_due',
# 'to_be_sampled',
# 'to_be_preserved',
# 'sample_received',
# ]:
# row_data['disabled'] = True
items[x]['row_data'] = json.dumps(row_data)
calculation = obj.getCalculation()
items[x]['Calculation'] = calculation and calculation.Title()
locale = locales.getLocale('en')
currency = self.context.bika_setup.getCurrency()
symbol = locale.numbers.currencies[currency].symbol
items[x]['before']['Price'] = symbol
items[x]['Price'] = obj.getPrice()
items[x]['class']['Price'] = 'nowrap'
items[x]['Priority'] = ''
if items[x]['selected']:
items[x]['allow_edit'] = ['Partition', 'min', 'max', 'error']
if not logged_in_client(self.context):
items[x]['allow_edit'].append('Price')
items[x]['required'].append('Partition')
items[x]['choices']['Partition'] = partitions
if obj.UID() in self.analyses:
analysis = self.analyses[obj.UID()]
part = analysis.getSamplePartition()
part = part and part or obj
items[x]['Partition'] = part.Title()
spec = self.get_spec_from_ar(
self.context,
analysis.getService().getKeyword())
items[x]["min"] = spec["min"]
items[x]["max"] = spec["max"]
items[x]["error"] = spec["error"]
# Add priority premium
items[x]['Price'] = analysis.getPrice()
priority = analysis.getPriority()
items[x]['Priority'] = priority and priority.Title() or ''
else:
items[x]['Partition'] = ''
items[x]["min"] = ''
items[x]["max"] = ''
items[x]["error"] = ''
items[x]["Priority"] = ''
after_icons = ''
if obj.getAccredited():
after_icons += "<img\
src='%s/++resource++bika.lims.images/accredited.png'\
title='%s'>" % (self.portal_url, t(_("Accredited")))
if obj.getReportDryMatter():
after_icons += "<img\
src='%s/++resource++bika.lims.images/dry.png'\
title='%s'>" % (self.portal_url,
t(_("Can be reported as dry matter")))
if obj.getAttachmentOption() == 'r':
after_icons += "<img\
src='%s/++resource++bika.lims.images/attach_reqd.png'\
title='%s'>" % (self.portal_url, t(_("Attachment required")))
if obj.getAttachmentOption() == 'n':
after_icons += "<img\
src='%s/++resource++bika.lims.images/attach_no.png'\
title='%s'>" % (self.portal_url,
t(_('Attachment not permitted')))
if after_icons:
items[x]['after']['Title'] = after_icons
self.categories.sort()
return items
def folderitems(self, full_objects = False):
items = BikaListingView.folderitems(self)
bsc = getToolByName(self.context, 'bika_setup_catalog')
containers = [({'ResultValue':o.UID,
'ResultText':o.title})
for o in bsc(portal_type="Container",
inactive_state="active")]
preservations = [({'ResultValue':o.UID,
'ResultText':o.title})
for o in bsc(portal_type="Preservation",
inactive_state="active")]
for x in range(len(items)):
if not items[x].has_key('obj'): continue
obj = items[x]['obj']
items[x]['PartTitle'] = obj.getId()
container = obj.getContainer()
if self.allow_edit:
items[x]['getContainer'] = container and container.UID() or ''
else:
items[x]['getContainer'] = container and container.Title() or ''
preservation = obj.getPreservation()
if self.allow_edit:
items[x]['getPreservation'] = preservation and preservation.UID() or ''
else:
items[x]['getPreservation'] = preservation and preservation.Title() or ''
## sampler = obj.getSampler().strip()
## items[x]['getSampler'] = \
## sampler and self.user_fullname(sampler) or ''
## datesampled = obj.getDateSampled()
## items[x]['getDateSampled'] = \
## datesampled and self.ulocalized_time(datesampled) or ''
preserver = obj.getPreserver().strip()
items[x]['getPreserver'] = \
preserver and self.user_fullname(preserver) or ''
datepreserved = obj.getDatePreserved()
items[x]['getDatePreserved'] = \
datepreserved and self.ulocalized_time(datepreserved) or ''
disposaldate = obj.getDisposalDate()
items[x]['getDisposalDate'] = \
disposaldate and self.ulocalized_time(disposaldate) or ''
samplingdate = obj.getSamplingDate()
# inline edits for Container and Preservation
items[x]['allow_edit'] = ['getContainer', 'getPreservation']
items[x]['choices']['getPreservation'] = preservations
items[x]['choices']['getContainer'] = containers
# inline edits for Sampler and Date Sampled
## checkPermission = self.context.portal_membership.checkPermission
## if checkPermission(SampleSample, obj) \
## and not samplingdate > DateTime():
## items[x]['required'] += ['getSampler', 'getDateSampled']
## items[x]['allow_edit'] += ['getSampler', 'getDateSampled']
## samplers = getUsers(obj, ['Sampler', 'LabManager', 'Manager'])
## getAuthenticatedMember = obj.portal_membership.getAuthenticatedMember
## username = getAuthenticatedMember().getUserName()
## users = [({'ResultValue': u, 'ResultText': samplers.getValue(u)})
## for u in samplers]
## items[x]['choices']['getSampler'] = users
## items[x]['getSampler'] = sampler and sampler or \
## (username in samplers.keys() and username) or ''
## items[x]['getDateSampled'] = items[x]['getDateSampled'] \
## or DateTime().strftime(self.date_format_short)
## items[x]['class']['getSampler'] = 'provisional'
## items[x]['class']['getDateSampled'] = 'provisional'
# inline edits for Preserver and Date Preserved
checkPermission = self.context.portal_membership.checkPermission
if checkPermission(PreserveSample, obj):
items[x]['required'] += ['getPreserver', 'getDatePreserved']
items[x]['allow_edit'] += ['getPreserver', 'getDatePreserved']
preservers = getUsers(obj, ['Preserver', 'LabManager', 'Manager'])
getAuthenticatedMember = obj.portal_membership.getAuthenticatedMember
username = getAuthenticatedMember().getUserName()
users = [({'ResultValue': u, 'ResultText': preservers.getValue(u)})
for u in preservers]
items[x]['choices']['getPreserver'] = users
items[x]['getPreserver'] = preserver and preserver or \
(username in preservers.keys() and username) or ''
items[x]['getDatePreserved'] = items[x]['getDatePreserved'] \
or DateTime().strftime(self.date_format_short)
items[x]['class']['getPreserver'] = 'provisional'
items[x]['class']['getDatePreserved'] = 'provisional'
return items
def folderitem(self, obj, item, index):
# Additional info from Worksheet to be added in the item generated by
# default by bikalisting.
# Call the folderitem method from the base class
item = BikaListingView.folderitem(self, obj, item, index)
if not item:
return None
item['CreationDate'] = self.ulocalized_time(obj.creation_date)
item['Analyst'] = obj.getAnalyst().strip()
item['Priority'] = ''
item['getPriority'] = ''
instrument = obj.getInstrument()
item['Instrument'] = instrument.Title() if instrument else ''
wst = obj.getWorksheetTemplate()
item['Template'] = wst.Title() if wst else ''
if wst:
item['replace']['Template'] = "<a href='%s'>%s</a>" % \
(wst.absolute_url(), wst.Title())
if len(obj.getAnalyses()) == 0:
item['table_row_class'] = 'state-empty-worksheet'
layout = obj.getLayout()
item['Title'] = obj.Title()
turl = "manage_results" if len(layout) > 0 else "add_analyses"
item['replace']['Title'] = "<a href='%s/%s'>%s</a>" % \
(item['url'], turl, item['Title'])
# Set services
ws_services = {}
for slot in [s for s in layout if s['type'] == 'a']:
analysis = self.rc.lookupObject(slot['analysis_uid'])
if not analysis:
error = "Analysis with uid '%s' NOT FOUND in Reference Catalog.\n Worksheet: '%s'. Layout: '%s'" % \
(slot['analysis_uid'], obj, layout)
logging.info(error)
continue
service = analysis.getService()
title = service.Title()
if title not in ws_services:
ws_services[title] = "<a href='%s'>%s</a>" % \
(service.absolute_url(), title)
keys = list(ws_services.keys())
keys.sort()
services = [ws_services[k] for k in keys]
item['Services'] = ""
item['replace']['Services'] = ", ".join(services)
pos_parent = {}
for slot in layout:
# compensate for bad data caused by a stupid bug.
if type(slot['position']) in (list, tuple):
slot['position'] = slot['position'][0]
if slot['position'] == 'new':
continue
if slot['position'] in pos_parent:
continue
pos_parent[slot['position']] = self.rc.lookupObject(
slot['container_uid'])
# Set Sample Types and QC Samples
sampletypes = []
qcsamples = []
for container in pos_parent.values():
if container.portal_type == 'AnalysisRequest':
sampletype = "<a href='%s'>%s</a>" % \
(container.getSample().getSampleType().absolute_url(),
container.getSample().getSampleType().Title())
sampletypes.append(sampletype)
if container.portal_type == 'ReferenceSample':
qcsample = "<a href='%s'>%s</a>" % \
(container.absolute_url(),
container.Title())
qcsamples.append(qcsample)
sampletypes = list(set(sampletypes))
sampletypes.sort()
item['SampleTypes'] = ""
item['replace']['SampleTypes'] = ", ".join(sampletypes)
qcsamples = list(set(qcsamples))
qcsamples.sort()
item['QC'] = ""
item['replace']['QC'] = ", ".join(qcsamples)
item['QCTotals'] = ''
# Total QC Samples (Total Routine Analyses)
analyses = obj.getAnalyses()
totalQCAnalyses = [
a for a in analyses if a.portal_type == 'ReferenceAnalysis'
or a.portal_type == 'DuplicateAnalysis'
]
totalQCSamples = [a.getSample().UID() for a in totalQCAnalyses]
totalQCSamples = list(set(totalQCSamples))
item['QCTotals'] = str(len(totalQCSamples)) + ' (' + str(
len(totalQCAnalyses)) + ')'
# Total Routine Samples (Total Routine Analyses)
totalRoutineAnalyses = [
a for a in analyses if a not in totalQCAnalyses
]
totalRoutineSamples = [
a.getSample().UID() for a in totalRoutineAnalyses
]
totalRoutineSamples = list(set(totalRoutineSamples))
item['RoutineTotals'] = str(len(totalRoutineSamples)) + ' (' + str(
len(totalRoutineAnalyses)) + ')'
if item['review_state'] == 'open' \
and self.allow_edit \
and self.restrict_results == False \
and self.can_manage == True:
item['allow_edit'] = [
'Analyst',
]
item['required'] = [
'Analyst',
]
item['choices'] = {'Analyst': self.analyst_choices}
self.can_reassign = True
return item
