def test_table(api_key_auth_client_usr):
batch_client = BatchSQLClient(api_key_auth_client_usr)
job = batch_client.create(SETUP_QUERIES)
while not job['status'] in BATCH_TERMINAL_STATES:
time.sleep(1)
job = batch_client.read(job['job_id'])
assert job['status'] == 'done'
def test_batch_create_and_wait_for_completion(api_key_auth_client_usr):
sql = BatchSQLClient(api_key_auth_client_usr)
# Create query
data = sql.create_and_wait_for_completion(BATCH_SQL_SINGLE_QUERY)
assert data['status'] in ['done', 'failed', 'canceled', 'unknown']
def test_table(api_key_auth_client_usr):
batch_client = BatchSQLClient(api_key_auth_client_usr)
job = batch_client.create(SETUP_QUERIES)
while not job['status'] in BATCH_TERMINAL_STATES:
time.sleep(1)
job = batch_client.read(job['job_id'])
assert job['status'] == 'done'
def test_batch_create_and_wait_for_completion(api_key_auth_client_usr):
sql = BatchSQLClient(api_key_auth_client_usr)
# Create query
data = sql.create_and_wait_for_completion(BATCH_SQL_SINGLE_QUERY)
assert data['status'] in ['done', 'failed', 'canceled', 'unknown']
def test_batchjobstatus_methods(self):
"""context.BatchJobStatus methods"""
from cartoframes.context import BatchJobStatus
from carto.sql import BatchSQLClient
cc = cartoframes.CartoContext(base_url=self.baseurl,
api_key=self.apikey)
batch_client = BatchSQLClient(cc.auth_client)
job_response = batch_client.create([
'select 1',
])
job_status = BatchJobStatus(cc, job_response)
possible_status = (
'pending',
'running',
'done',
'canceled',
'unknown',
)
self.assertTrue(job_status.get_status() in possible_status)
job_status._set_status('foo')
self.assertEqual(job_status.get_status(), 'foo')
new_status = job_status.status()
self.assertSetEqual(set(new_status.keys()),
{'status', 'updated_at', 'created_at'})
# job_id as str
str_bjs = BatchJobStatus(cc, 'foo')
self.assertIsNone(str_bjs.get_status())
self.assertEqual(str_bjs.job_id, 'foo')
def __init__(self, credentials):
self.credentials = credentials or get_default_credentials()
check_credentials(self.credentials)
self.auth_client = _create_auth_client(self.credentials)
self.sql_client = SQLClient(self.auth_client)
self.copy_client = CopySQLClient(self.auth_client)
self.batch_sql_client = BatchSQLClient(self.auth_client)
def test_batch_multi_sql(api_key_auth_client_usr):
sql = BatchSQLClient(api_key_auth_client_usr)
# Create query
data = sql.create(BATCH_SQL_MULTI_QUERY)
# Get job ID
job_id = data['job_id']
# Cancel if not finished
cancel_job_if_not_finished(sql, job_id)
def test_batch_multi_sql(api_key_auth_client_usr):
sql = BatchSQLClient(api_key_auth_client_usr)
# Create query
data = sql.create(BATCH_SQL_MULTI_QUERY)
# Get job ID
job_id = data['job_id']
# Cancel if not finished
cancel_job_if_not_finished(sql, job_id)
def __init__(self, carto_context, job):
if isinstance(job, dict):
self.job_id = job.get('job_id')
self.last_status = job.get('status')
self.created_at = job.get('created_at')
elif isinstance(job, str):
self.job_id = job
self.last_status = None
self.created_at = None
self._batch_client = BatchSQLClient(carto_context.auth_client)
def initialize(self):
if not self.api_url and self.user_name:
self.api_url = "https://{}.carto.com/api/".format(self.user_name)
elif not self.api_url and not self.user_name:
raise Exception(
'Not enough data provided to initialize the client')
if self.org_name:
self.client = APIKeyAuthClient(self.api_url, self.api_key,
self.org_name)
else:
self.client = APIKeyAuthClient(self.api_url, self.api_key)
self.sql_client = SQLClient(self.client)
self.batch_client = BatchSQLClient(self.client)
def __init__(self, user, api_key, options={}):
super().__init__(options)
self.do_post = options.get('do_post', False)
self.parse_json = options.get('parse_json', True)
self.format = options.get('format', 'json')
self.base_url_option = options.get('base_url', '')
self.api_version = options.get('api_version', self.DEFAULT_API_VERSION)
self.batch = options.get('batch', False)
self.user = user
self.api_key = api_key
self.base_url = self._generate_base_url(user, self.base_url_option)
# Carto Context for DataFrame handling
self._carto_context = None
# Carto client for COPYs
self._copy_client = None
self._auth_client = APIKeyAuthClient(api_key=api_key,
base_url=self.base_url)
self._sql_client = SQLClient(self._auth_client,
api_version=self.api_version)
self._batch_client = None
if self.batch:
self._batch_client = BatchSQLClient(self._auth_client)
def test_batch_multi_sql(api_key_auth_client_usr):
sql = BatchSQLClient(api_key_auth_client_usr)
# Create query
data = sql.create(BATCH_SQL_MULTI_QUERY)
# Update status
job_id = data['job_id']
# Cancel if not finished
try:
confirmation = sql.cancel(job_id)
except CartoException:
pass
else:
assert confirmation == 'cancelled'
def batchsql(self, list_of_sqls, checkevery=1, maxtime=5):
# pass in a list of sqls to execute
# probably dont want to read a file with a million records and upload
# open streets for ex is 1k rows, 500KB
batchSQLClient = BatchSQLClient(self.auth_client)
createJob = batchSQLClient.create(list_of_sqls)
# https://github.com/CartoDB/carto-python
# job_id looks like
# 5171b8c4-8c03-4610-8797-5dd98ff3e61b
# job looks like
# {
# 'user': '******',
# 'status': 'done',
# 'query': [{'query': 'drop table if exists foo', 'status': 'done'},
# {'query': 'create table foo (bar text)', 'status': 'done'},
# {...} {...}],
# 'created_at': '2020-07-02T16:31:31.873Z',
# 'updated_at': '2020-07-02T16:31:31.996Z',
# 'job_id': '5171b8c4-8c03-4610-8797-5dd98ff3e61b'
# }
# queries are nested because you can add more sets to a running job
readJob = batchSQLClient.read(createJob['job_id'])
cheks = 0
while (readJob['status'] != 'done'):
time.sleep(checkevery)
readJob = batchSQLClient.read(createJob['job_id'])
cheks += 1
if cheks > maxtime:
return False
return True
def __init__(self, csv_file_path, **kwargs):
self.__set_max_csv_length()
self.__set_defaults()
for key, value in kwargs.items():
try:
setattr(self, key, int(value))
except (ValueError, TypeError):
if value in ("true", "True"):
setattr(self, key, True)
elif value in ("false", "False"):
setattr(self, key, False)
else:
setattr(self, key, value)
self.__trim_columns()
self.csv_file_path = csv_file_path
if self.api_key:
self.api_auth = APIKeyAuthClient(self.base_url, self.api_key)
self.sql = SQLClient(self.api_auth)
self.bsql = BatchSQLClient(self.api_auth)
class UploadJob(object):
def __init__(self, csv_file_path, **kwargs):
self.__set_max_csv_length()
self.__set_defaults()
for key, value in kwargs.items():
try:
setattr(self, key, int(value))
except (ValueError, TypeError):
if value in ("true", "True"):
setattr(self, key, True)
elif value in ("false", "False"):
setattr(self, key, False)
else:
setattr(self, key, value)
self.__trim_columns()
self.csv_file_path = csv_file_path
if self.api_key:
self.api_auth = APIKeyAuthClient(self.base_url, self.api_key)
self.sql = SQLClient(self.api_auth)
self.bsql = BatchSQLClient(self.api_auth)
def __set_defaults(self):
self.delimiter = DEFAULT_DELIMITER
self.x_column = DEFAULT_X_COLUMN
self.y_column = DEFAULT_Y_COLUMN
self.srid = DEFAULT_SRID
self.chunk_size = DEFAULT_CHUNK_SIZE
self.max_attempts = DEFAULT_MAX_ATTEMPTS
self.file_encoding = DEFAULT_FILE_ENCOFING
self.force_no_geometry = DEFAULT_FORCE_NO_GEOMETRY
self.force_the_geom = DEFAULT_FORCE_THE_GEOM
self.date_format = DEFAULT_DATE_FORMAT
self.datetime_format = DEFAULT_DATETIME_FORMAT
self.float_comma_separator = DEFAULT_FLOAT_COMMA_SEPARATOR
self.float_thousand_separator = DEFAULT_FLOAT_THOUSAND_SEPARATOR
self.date_columns = DEFAULT_DATE_COLUMNS
self.observer = None
def __set_max_csv_length(self):
maxInt = sys.maxsize
decrement = True
while decrement:
# decrease the maxInt value by factor 10
# as long as the OverflowError occurs.
decrement = False
try:
csv.field_size_limit(maxInt)
except OverflowError:
maxInt = int(maxInt / 10)
decrement = True
def __trim_columns(self):
if self.columns is not None:
self.columns = self.columns.replace(' ', '')
if self.date_columns is not None:
self.date_columns = self.date_columns.replace(' ', '')
def run(self, start_chunk=1, end_chunk=None):
if not isinstance(self.csv_file_path, str):
self.do_run(self.csv_file_path, start_chunk, end_chunk)
else:
if sys.version_info <= (3, 0):
with open(self.csv_file_path) as f:
self.do_run(f, start_chunk, end_chunk)
else:
with open(self.csv_file_path,
encoding=self.file_encoding) as f:
self.do_run(f, start_chunk, end_chunk)
def notify(self, message_type, message):
observer = getattr(self, "observer", None)
if callable(observer):
observer({"type": message_type, "msg": str(message)})
return True
return False
def regenerate_overviews(self):
query = 'select CDB_CreateOverviews(\'{table}\'::regclass)'.\
format(table=self.table_name)
job_result = self.bsql.create(query)
return job_result['job_id']
def check_job(self, job_id):
return self.bsql.read(job_id)
def create_geom_query(self, record):
null_result = NULL_VALUE + ","
if self.force_the_geom:
return self.parse_column_value(record,
self.force_the_geom,
parse_float=False)
if self.force_no_geometry:
return null_result
longitude = self.get_longitude(record)
latitude = self.get_latitude(record)
if longitude is None or latitude is None \
or longitude is DEFAULT_COORD or latitude is DEFAULT_COORD:
return null_result
return "st_transform(st_setsrid(st_makepoint(" + \
"{longitude}, {latitude}), {srid}), 4326),".\
format(longitude=longitude, latitude=latitude, srid=self.srid)
def parse_column_value(self, record, column, parse_float=True):
null_result = NULL_VALUE + ","
try:
value = self.escape_value(record[column])
except Exception:
return null_result
try:
if self.is_date_column(column):
try:
result = "'{value}',".format(
value=self.parse_date_column(record, column))
except ValueError:
result = null_result
elif parse_float:
result = "{value},".format(value=self.parse_float_value(value))
else:
raise TypeError
except (ValueError, TypeError):
if value is None or not value.strip():
result = null_result
else:
result = "'{value}',".format(value=value)
return result
def is_date_column(self, column):
return column is not None and self.date_columns is not None and column in self.date_columns.split(
',')
def parse_date_column(self, record, column):
if not self.date_format or not self.datetime_format:
raise ValueError
try:
return datetime.strptime(
record[column],
self.datetime_format).strftime(CARTO_DATE_FORMAT)
except Exception:
try:
return datetime.strptime(
record[column],
self.date_format).strftime(CARTO_DATE_FORMAT)
except Exception:
raise ValueError
def escape_value(self, value):
return value.replace("'", "''")
def get_longitude(self, record):
try:
longitude = self.get_coord(record, self.x_column)
if abs(longitude) > MAX_LON:
return None
except TypeError:
return DEFAULT_COORD
else:
return longitude
def get_latitude(self, record):
try:
latitude = self.get_coord(record, self.y_column)
if abs(latitude) > MAX_LAT:
return None
except TypeError:
return DEFAULT_COORD
else:
return latitude
def get_coord(self, record, type):
try:
coord = self.parse_float_value(record[type]) or DEFAULT_COORD
except (ValueError, KeyError):
coord = DEFAULT_COORD
else:
return coord
def parse_float_value(self, value):
if value.upper() in (val.upper() for val in FORBIDDEN_FLOAT_VALUES):
raise ValueError
if self.float_thousand_separator:
value = value.replace(self.float_thousand_separator, "")
if self.float_comma_separator:
value = value.replace(self.float_comma_separator, ".")
return float(value)
def send(self, query, file_encoding, chunk_num):
if sys.version_info <= (3, 0):
query = query.decode(file_encoding).encode(UTF8)
logger.debug("Chunk #{chunk_num}: {query}".format(
chunk_num=(chunk_num + 1), query=query))
for retry in range(self.max_attempts):
try:
self.sql.send(query)
except Exception as e:
logger.warning(
"Chunk #{chunk_num}: Retrying ({error_msg})".format(
chunk_num=(chunk_num + 1), error_msg=e))
self.notify('error', e)
else:
logger.info("Chunk #{chunk_num}: Success!".format(
chunk_num=(chunk_num + 1)))
self.notify('progress', chunk_num + 1)
break
else:
logger.error("Chunk #{chunk_num}: Failed!)".format(
chunk_num=(chunk_num + 1)))
self.notify('error', "Failed " + str(chunk_num + 1))
class BatchJobStatus(object):
"""Status of a write or query operation. Read more at `Batch SQL API docs
<https://carto.com/docs/carto-engine/sql-api/batch-queries/>`__ about
responses and how to interpret them.
Example:
Poll for a job's status if you've caught the :py:class:`BatchJobStatus`
instance.
.. code:: python
import time
job = cc.write(df, 'new_table',
lnglat=('lng_col', 'lat_col'))
while True:
curr_status = job.status()['status']
if curr_status in ('done', 'failed', 'canceled', 'unknown', ):
print(curr_status)
break
time.sleep(5)
Create a :py:class:`BatchJobStatus` instance if you have a `job_id`
output from a :py:meth:`CartoContext.write
<cartoframes.context.CartoContext.write>` operation.
.. code:: python
>>> from cartoframes import CartoContext, BatchJobStatus
>>> cc = CartoContext(username='******', api_key='...')
>>> cc.write(df, 'new_table', lnglat=('lng', 'lat'))
'BatchJobStatus(job_id='job-id-string', ...)'
>>> batch_job = BatchJobStatus(cc, 'job-id-string')
Attributes:
job_id (str): Job ID of the Batch SQL API job
last_status (str): Status of ``job_id`` job when last polled
created_at (str): Time and date when job was created
Args:
carto_context (:py:class:`CartoContext <cartoframes.context.CartoContext>`):
:py:class:`CartoContext <cartoframes.context.CartoContext>` instance
job (dict or str): If a dict, job status dict returned after sending
a Batch SQL API request. If str, a Batch SQL API job id.
"""
def __init__(self, carto_context, job):
if isinstance(job, dict):
self.job_id = job.get('job_id')
self.last_status = job.get('status')
self.created_at = job.get('created_at')
elif isinstance(job, str):
self.job_id = job
self.last_status = None
self.created_at = None
self._batch_client = BatchSQLClient(carto_context.auth_client)
def __repr__(self):
return ('BatchJobStatus(job_id=\'{job_id}\', '
'last_status=\'{status}\', '
'created_at=\'{created_at}\')'.format(
job_id=self.job_id,
status=self.last_status,
created_at=self.created_at))
def _set_status(self, curr_status):
self.last_status = curr_status
def get_status(self):
"""return current status of job"""
return self.last_status
def status(self):
"""Checks the current status of job ``job_id``
Returns:
dict: Status and time it was updated
Warns:
UserWarning: If the job failed, a warning is raised with
information about the failure
"""
resp = self._batch_client.read(self.job_id)
if 'failed_reason' in resp:
warn('Job failed: {}'.format(resp.get('failed_reason')))
self._set_status(resp.get('status'))
return dict(status=resp.get('status'),
updated_at=resp.get('updated_at'),
created_at=resp.get('created_at'))
class ContextManager:
def __init__(self, credentials):
self.credentials = credentials or get_default_credentials()
check_credentials(self.credentials)
self.auth_client = _create_auth_client(self.credentials)
self.sql_client = SQLClient(self.auth_client)
self.copy_client = CopySQLClient(self.auth_client)
self.batch_sql_client = BatchSQLClient(self.auth_client)
@not_found
def execute_query(self,
query,
parse_json=True,
do_post=True,
format=None,
**request_args):
return self.sql_client.send(query.strip(), parse_json, do_post, format,
**request_args)
@not_found
def execute_long_running_query(self, query):
return self.batch_sql_client.create_and_wait_for_completion(
query.strip())
def copy_to(self,
source,
schema=None,
limit=None,
retry_times=DEFAULT_RETRY_TIMES):
query = self.compute_query(source, schema)
columns = self._get_query_columns_info(query)
copy_query = self._get_copy_query(query, columns, limit)
return self._copy_to(copy_query, columns, retry_times)
def copy_from(self,
gdf,
table_name,
if_exists='fail',
cartodbfy=True,
retry_times=DEFAULT_RETRY_TIMES):
schema = self.get_schema()
table_name = self.normalize_table_name(table_name)
df_columns = get_dataframe_columns_info(gdf)
if self.has_table(table_name, schema):
if if_exists == 'replace':
table_query = self._compute_query_from_table(
table_name, schema)
table_columns = self._get_query_columns_info(table_query)
if self._compare_columns(df_columns, table_columns):
# Equal columns: truncate table
self._truncate_table(table_name, schema, cartodbfy)
else:
# Diff columns: truncate table and drop + add columns
self._truncate_and_drop_add_columns(
table_name, schema, df_columns, table_columns,
cartodbfy)
elif if_exists == 'fail':
raise Exception(
'Table "{schema}.{table_name}" already exists in your CARTO account. '
'Please choose a different `table_name` or use '
'if_exists="replace" to overwrite it.'.format(
table_name=table_name, schema=schema))
else: # 'append'
pass
else:
self._create_table_from_columns(table_name, schema, df_columns,
cartodbfy)
self._copy_from(gdf, table_name, df_columns, retry_times)
return table_name
def create_table_from_query(self,
query,
table_name,
if_exists,
cartodbfy=True):
schema = self.get_schema()
table_name = self.normalize_table_name(table_name)
if self.has_table(table_name, schema):
if if_exists == 'replace':
# TODO: review logic copy_from
self._drop_create_table_from_query(table_name, schema, query,
cartodbfy)
elif if_exists == 'fail':
raise Exception(
'Table "{schema}.{table_name}" already exists in your CARTO account. '
'Please choose a different `table_name` or use '
'if_exists="replace" to overwrite it.'.format(
table_name=table_name, schema=schema))
else: # 'append'
pass
else:
self._drop_create_table_from_query(table_name, schema, query,
cartodbfy)
return table_name
def list_tables(self, schema=None):
datasets = DatasetManager(self.auth_client).filter(
show_table_size_and_row_count='false',
show_table='false',
show_stats='false',
show_likes='false',
show_liked='false',
show_permission='false',
show_uses_builder_features='false',
show_synchronization='false',
load_totals='false')
datasets.sort(key=lambda x: x.updated_at, reverse=True)
return pd.DataFrame([dataset.name for dataset in datasets],
columns=['tables'])
def has_table(self, table_name, schema=None):
query = self.compute_query(table_name, schema)
return self._check_exists(query)
def delete_table(self, table_name):
query = _drop_table_query(table_name)
output = self.execute_query(query)
return not ('notices' in output
and 'does not exist' in output['notices'][0])
def rename_table(self, table_name, new_table_name, if_exists='fail'):
new_table_name = self.normalize_table_name(new_table_name)
if table_name == new_table_name:
raise ValueError(
'Table names are equal. Please choose a different table name.')
if not self.has_table(table_name):
raise Exception(
'Table "{table_name}" does not exist in your CARTO account.'.
format(table_name=table_name))
if self.has_table(new_table_name):
if if_exists == 'replace':
log.debug('Removing table "{}"'.format(new_table_name))
self.delete_table(new_table_name)
elif if_exists == 'fail':
raise Exception(
'Table "{new_table_name}" already exists in your CARTO account. '
'Please choose a different `new_table_name` or use '
'if_exists="replace" to overwrite it.'.format(
new_table_name=new_table_name))
self._rename_table(table_name, new_table_name)
return new_table_name
def update_privacy_table(self, table_name, privacy=None):
DatasetInfo(self.auth_client, table_name).update_privacy(privacy)
def get_privacy(self, table_name):
return DatasetInfo(self.auth_client, table_name).privacy
def get_schema(self):
"""Get user schema from current credentials"""
query = 'SELECT current_schema()'
result = self.execute_query(query, do_post=False)
schema = result['rows'][0]['current_schema']
log.debug('schema: {}'.format(schema))
return schema
def get_geom_type(self, query):
"""Fetch geom type of a remote table or query"""
distict_query = '''
SELECT distinct ST_GeometryType(the_geom) AS geom_type
FROM ({}) q
LIMIT 5
'''.format(query)
response = self.execute_query(distict_query, do_post=False)
if response and response.get('rows') and len(response.get('rows')) > 0:
st_geom_type = response.get('rows')[0].get('geom_type')
if st_geom_type:
return map_geom_type(st_geom_type[3:])
return None
def get_num_rows(self, query):
"""Get the number of rows in the query"""
result = self.execute_query(
'SELECT COUNT(*) FROM ({query}) _query'.format(query=query))
return result.get('rows')[0].get('count')
def get_bounds(self, query):
extent_query = '''
SELECT ARRAY[
ARRAY[st_xmin(geom_env), st_ymin(geom_env)],
ARRAY[st_xmax(geom_env), st_ymax(geom_env)]
] bounds FROM (
SELECT ST_Extent(the_geom) geom_env
FROM ({}) q
) q;
'''.format(query)
response = self.execute_query(extent_query, do_post=False)
if response and response.get('rows') and len(response.get('rows')) > 0:
return response.get('rows')[0].get('bounds')
return None
def get_column_names(self, source, schema=None, exclude=None):
query = self.compute_query(source, schema)
columns = [c.name for c in self._get_query_columns_info(query)]
if exclude and isinstance(exclude, list):
columns = list(set(columns) - set(exclude))
return columns
def is_public(self, query):
# Used to detect public tables in queries in the publication,
# because privacy only works for tables.
public_auth_client = _create_auth_client(self.credentials, public=True)
public_sql_client = SQLClient(public_auth_client)
exists_query = 'EXPLAIN {}'.format(query)
try:
public_sql_client.send(exists_query, do_post=False)
return True
except CartoException:
return False
def get_table_names(self, query):
# Used to detect tables in queries in the publication.
query = 'SELECT CDB_QueryTablesText($q${}$q$) as tables'.format(query)
result = self.execute_query(query)
tables = []
if result['total_rows'] > 0 and result['rows'][0]['tables']:
# Dataset_info only works with tables without schema
tables = [
table.split('.')[1] if '.' in table else table
for table in result['rows'][0]['tables']
]
return tables
def _compare_columns(self, a, b):
a_copy = [i for i in a if _not_reserved(i.name)]
b_copy = [i for i in b if _not_reserved(i.name)]
a_copy.sort()
b_copy.sort()
return a_copy == b_copy
def _drop_create_table_from_query(self, table_name, schema, query,
cartodbfy):
log.debug('DROP + CREATE table "{}"'.format(table_name))
query = 'BEGIN; {drop}; {create}; {cartodbfy}; COMMIT;'.format(
drop=_drop_table_query(table_name),
create=_create_table_from_query_query(table_name, query),
cartodbfy=_cartodbfy_query(table_name, schema)
if cartodbfy else '')
self.execute_long_running_query(query)
def _create_table_from_columns(self, table_name, schema, columns,
cartodbfy):
log.debug('CREATE table "{}"'.format(table_name))
query = 'BEGIN; {create}; {cartodbfy}; COMMIT;'.format(
create=_create_table_from_columns_query(table_name, columns),
cartodbfy=_cartodbfy_query(table_name, schema)
if cartodbfy else '')
self.execute_long_running_query(query)
def _truncate_table(self, table_name, schema, cartodbfy):
log.debug('TRUNCATE table "{}"'.format(table_name))
query = 'BEGIN; {truncate}; {cartodbfy}; COMMIT;'.format(
truncate=_truncate_table_query(table_name),
cartodbfy=_cartodbfy_query(table_name, schema)
if cartodbfy else '')
self.execute_long_running_query(query)
def _truncate_and_drop_add_columns(self, table_name, schema, df_columns,
table_columns, cartodbfy):
log.debug(
'TRUNCATE AND DROP + ADD columns table "{}"'.format(table_name))
query = '{regenerate}; BEGIN; {truncate}; {drop_columns}; {add_columns}; {cartodbfy}; COMMIT;'.format(
regenerate=_regenerate_table_query(table_name, schema)
if self._check_regenerate_table_exists() else '',
truncate=_truncate_table_query(table_name),
drop_columns=_drop_columns_query(table_name, table_columns),
add_columns=_add_columns_query(table_name, df_columns),
cartodbfy=_cartodbfy_query(table_name, schema)
if cartodbfy else '')
self.execute_long_running_query(query)
def compute_query(self, source, schema=None):
if is_sql_query(source):
return source
schema = schema or self.get_schema()
return self._compute_query_from_table(source, schema)
def _compute_query_from_table(self, table_name, schema):
return 'SELECT * FROM "{schema}"."{table_name}"'.format(
schema=schema or 'public', table_name=table_name)
def _check_exists(self, query):
exists_query = 'EXPLAIN {}'.format(query)
try:
self.execute_query(exists_query, do_post=False)
return True
except CartoException:
return False
def _check_regenerate_table_exists(self):
query = '''
SELECT 1
FROM pg_catalog.pg_proc p
LEFT JOIN pg_catalog.pg_namespace n ON n.oid = p.pronamespace
WHERE p.proname = 'cdb_regeneratetable' AND n.nspname = 'cartodb';
'''
result = self.execute_query(query)
return len(result['rows']) > 0
def _get_query_columns_info(self, query):
query = 'SELECT * FROM ({}) _q LIMIT 0'.format(query)
table_info = self.execute_query(query)
return get_query_columns_info(table_info['fields'])
def _get_copy_query(self, query, columns, limit):
query_columns = [
double_quote(column.name) for column in columns
if (column.name != 'the_geom_webmercator')
]
query = 'SELECT {columns} FROM ({query}) _q'.format(
query=query, columns=','.join(query_columns))
if limit is not None:
if isinstance(limit, int) and (limit >= 0):
query += ' LIMIT {limit}'.format(limit=limit)
else:
raise ValueError("`limit` parameter must an integer >= 0")
return query
@retry_copy
def _copy_to(self, query, columns, retry_times=DEFAULT_RETRY_TIMES):
log.debug('COPY TO')
copy_query = "COPY ({0}) TO stdout WITH (FORMAT csv, HEADER true, NULL '{1}')".format(
query, PG_NULL)
raw_result = self.copy_client.copyto_stream(copy_query)
converters = obtain_converters(columns)
parse_dates = date_columns_names(columns)
df = pd.read_csv(raw_result,
converters=converters,
parse_dates=parse_dates)
return df
@retry_copy
def _copy_from(self,
dataframe,
table_name,
columns,
retry_times=DEFAULT_RETRY_TIMES):
log.debug('COPY FROM')
query = """
COPY {table_name}({columns}) FROM stdin WITH (FORMAT csv, DELIMITER '|', NULL '{null}');
""".format(table_name=table_name,
null=PG_NULL,
columns=','.join(
double_quote(column.dbname)
for column in columns)).strip()
data = _compute_copy_data(dataframe, columns)
self.copy_client.copyfrom(query, data)
def _rename_table(self, table_name, new_table_name):
query = _rename_table_query(table_name, new_table_name)
self.execute_query(query)
def normalize_table_name(self, table_name):
norm_table_name = normalize_name(table_name)
if norm_table_name != table_name:
log.debug('Table name normalized: "{}"'.format(norm_table_name))
return norm_table_name
help='Set the base URL. For example:' +
' https://username.carto.com/ ' +
'(defaults to env variable CARTO_API_URL)')
parser.add_argument('--api_key', dest='CARTO_API_KEY',
default=os.environ['CARTO_API_KEY'] if 'CARTO_API_KEY' in os.environ else '',
help='Api key of the account' +
' (defaults to env variable CARTO_API_KEY)')
args = parser.parse_args()
# Set authentification to CARTO
if args.CARTO_BASE_URL and args.CARTO_API_KEY and args.organization:
auth_client = APIKeyAuthClient(
args.CARTO_BASE_URL, args.CARTO_API_KEY, args.organization)
batchSQLClient = BatchSQLClient(auth_client)
else:
logger.error('You need to provide valid credentials, run with -h parameter for details')
import sys
sys.exit(1)
# Batch SQL API operations
if args.operation == 'create':
# create a batch api job
createJob = batchSQLClient.create(args.query)
for a, b in createJob.items():
logger.info('{key}: {value}'.format(key=a, value=b))
elif args.operation == 'read':
readJob = batchSQLClient.read(args.job_id)
for a, b in readJob.items():
logger.info('{key}: {value}'.format(key=a, value=b))
class CARTOUser(object):
def __init__(self,
user_name=None,
org_name=None,
api_url=None,
api_key=None,
check_ssl=True):
self.user_name = user_name
self.org_name = org_name
self.api_url = api_url
self.api_key = api_key
if not check_ssl:
old_request = requests.Session.request
requests.Session.request = partialmethod(old_request, verify=False)
warnings.filterwarnings('ignore', 'Unverified HTTPS request')
def initialize(self):
if not self.api_url and self.user_name:
self.api_url = "https://{}.carto.com/api/".format(self.user_name)
elif not self.api_url and not self.user_name:
raise Exception(
'Not enough data provided to initialize the client')
if self.org_name:
self.client = APIKeyAuthClient(self.api_url, self.api_key,
self.org_name)
else:
self.client = APIKeyAuthClient(self.api_url, self.api_key)
self.sql_client = SQLClient(self.client)
self.batch_client = BatchSQLClient(self.client)
self.copy_client = CopySQLClient(self.client)
def execute_sql(self, query, parse_json=True, format=None, do_post=False):
try:
try:
self.client
except AttributeError:
self.initialize()
return self.sql_client.send(query,
parse_json=parse_json,
format=format,
do_post=do_post)
except CartoException as e:
raise Exception(e.args[0].args[0][0])
def batch_check(self, job_id):
try:
self.batch_client
except AttributeError:
self.initialize()
return self.batch_client.read(job_id)
def batch_create(self, query):
try:
self.batch_client
except AttributeError:
self.initialize()
return self.batch_client.create(query)
def batch_cancel(self, job_id):
try:
self.batch_client
except AttributeError:
self.initialize()
return self.batch_client.cancel(job_id)
def get_dataset_manager(self):
try:
self.sql_client
except AttributeError:
self.initialize()
return DatasetManager(self.client)
def get_sync_manager(self):
try:
self.sql_client
except AttributeError:
self.initialize()
return SyncTableJobManager(self.client)
def upload(self, uri, sync_time=None):
try:
self.sql_client
except AttributeError:
self.initialize()
dataset_manager = DatasetManager(self.client)
if sync_time:
return dataset_manager.create(uri, sync_time)
else:
return dataset_manager.create(uri)
def copy_from(self, path, query, tablename=None, delimiter=','):
try:
self.copy_client
except AttributeError:
self.initialize()
if tablename is None:
tablename = Path(path).stem
if query is None:
with open(path, 'rb') as myfile:
headers = next(myfile).strip().decode('utf8')
query = f"""COPY {tablename} ({headers}) FROM stdin
(FORMAT CSV, DELIMITER '{delimiter}', HEADER false, QUOTE '"')"""
return self.copy_client.copyfrom_file_object(query, myfile)
return self.copy_client.copyfrom_file_path(query, path)
def copy_to(self, query, output, delimiter=','):
try:
self.copy_client
except AttributeError:
self.initialize()
copy_query = f"""COPY ({query}) TO stdout WITH
(FORMAT CSV, DELIMITER '{delimiter}', HEADER true, QUOTE '"')"""
return self.copy_client.copyto_file_path(copy_query, output)
class CARTOUser(object):
def __init__(self,
user_name=None,
org_name=None,
api_url=None,
api_key=None,
check_ssl=True):
self.user_name = user_name
self.org_name = org_name
self.api_url = api_url
self.api_key = api_key
if not check_ssl:
old_request = requests.Session.request
requests.Session.request = partialmethod(old_request, verify=False)
warnings.filterwarnings('ignore', 'Unverified HTTPS request')
def initialize(self):
if not self.api_url and self.user_name:
self.api_url = "https://{}.carto.com/api/".format(self.user_name)
elif not self.api_url and not self.user_name:
raise Exception(
'Not enough data provided to initialize the client')
if self.org_name:
self.client = APIKeyAuthClient(self.api_url, self.api_key,
self.org_name)
else:
self.client = APIKeyAuthClient(self.api_url, self.api_key)
self.sql_client = SQLClient(self.client)
self.batch_client = BatchSQLClient(self.client)
def execute_sql(self, query, parse_json=True, format=None, do_post=False):
try:
try:
self.client
except AttributeError:
self.initialize()
return self.sql_client.send(query,
parse_json=parse_json,
format=format,
do_post=do_post)
except CartoException as e:
raise Exception(e.args[0].args[0][0])
def batch_check(self, job_id):
try:
self.batch_client
except AttributeError:
self.initialize()
return self.batch_client.read(job_id)
def batch_create(self, query):
try:
self.batch_client
except AttributeError:
self.initialize()
return self.batch_client.create(query)
def batch_cancel(self, job_id):
try:
self.batch_client
except AttributeError:
self.initialize()
return self.batch_client.cancel(job_id)
def get_dataset_manager(self):
try:
self.sql_client
except AttributeError:
self.initialize()
return DatasetManager(self.client)
def get_sync_manager(self):
try:
self.sql_client
except AttributeError:
self.initialize()
return SyncTableJobManager(self.client)
def upload(self, uri, sync_time=None):
try:
self.sql_client
except AttributeError:
self.initialize()
dataset_manager = DatasetManager(self.client)
if sync_time:
return dataset_manager.create(uri, sync_time)
else:
return dataset_manager.create(uri)
parser.add_argument('--organization', type=str, dest='organization',
default=os.environ['CARTO_ORG'] if 'CARTO_ORG' in os.environ else '',
help='Set the name of the organization' +
' account (defaults to env variable CARTO_ORG)')
parser.add_argument('--base_url', type=str, dest='CARTO_BASE_URL',
default=os.environ['CARTO_API_URL'] if 'CARTO_API_URL' in os.environ else '',
help='Set the base URL. For example:' +
' https://username.carto.com/ ' +
'(defaults to env variable CARTO_API_URL)')
parser.add_argument('--api_key', dest='CARTO_API_KEY',
default=os.environ['CARTO_API_KEY'] if 'CARTO_API_KEY' in os.environ else '',
help='Api key of the account' +
' (defaults to env variable CARTO_API_KEY)')
args = parser.parse_args()
# Set authentification to CARTO
if args.CARTO_BASE_URL and args.CARTO_API_KEY and args.organization:
auth_client = APIKeyAuthClient(
args.CARTO_BASE_URL, args.CARTO_API_KEY, args.organization)
batchSQLClient = BatchSQLClient(auth_client)
else:
logger.error('You need to provide valid credentials, run with -h parameter for details')
import sys
sys.exit(1)
job = batchSQLClient.create_and_wait_for_completion(args.query)
logger.info('Job finished with status {status}'.format(status=job['status']))
' https://username.carto.com/ ' +
'(defaults to env variable CARTO_API_URL)')
parser.add_argument('--api_key',
dest='CARTO_API_KEY',
default=os.environ['CARTO_API_KEY'],
help='Api key of the account' +
' (defaults to env variable CARTO_API_KEY)')
args = parser.parse_args()
# Set authentification to CARTO
auth_client = APIKeyAuthClient(args.CARTO_BASE_URL, args.CARTO_API_KEY,
args.organization)
batchSQLClient = BatchSQLClient(auth_client)
# Batch SQL API operations
if args.operation == 'create':
# create a batch api job
createJob = batchSQLClient.create(args.query)
for a, b in createJob.items():
logger.info('{key}: {value}'.format(key=a, value=b))
elif args.operation == 'read':
readJob = batchSQLClient.read(args.job_id)
for a, b in readJob.items():
logger.info('{key}: {value}'.format(key=a, value=b))
elif args.operation == 'update':
updateJob = batchSQLClient.update(args.job_id, args.query)
for a, b in updateJob.items():
logger.info('{key}: {value}'.format(key=a, value=b))
dest='CARTO_BASE_URL',
default=os.environ['CARTO_API_URL']
if 'CARTO_API_URL' in os.environ else '',
help='Set the base URL. For example:' +
' https://username.carto.com/ ' +
'(defaults to env variable CARTO_API_URL)')
parser.add_argument('--api_key',
dest='CARTO_API_KEY',
default=os.environ['CARTO_API_KEY']
if 'CARTO_API_KEY' in os.environ else '',
help='Api key of the account' +
' (defaults to env variable CARTO_API_KEY)')
args = parser.parse_args()
# Set authentification to CARTO
if args.CARTO_BASE_URL and args.CARTO_API_KEY and args.organization:
auth_client = APIKeyAuthClient(args.CARTO_BASE_URL, args.CARTO_API_KEY,
args.organization)
batchSQLClient = BatchSQLClient(auth_client)
else:
logger.error(
'You need to provide valid credentials, run with -h parameter for details'
)
import sys
sys.exit(1)
job = batchSQLClient.create_and_wait_for_completion(args.query)
logger.info('Job finished with status {status}'.format(status=job['status']))
class ContextManager:
def __init__(self, credentials):
self.credentials = credentials or get_default_credentials()
check_credentials(self.credentials)
self.auth_client = _create_auth_client(self.credentials)
self.sql_client = SQLClient(self.auth_client)
self.copy_client = CopySQLClient(self.auth_client)
self.batch_sql_client = BatchSQLClient(self.auth_client)
def execute_query(self,
query,
parse_json=True,
do_post=True,
format=None,
**request_args):
return self.sql_client.send(query.strip(), parse_json, do_post, format,
**request_args)
def execute_long_running_query(self, query):
return self.batch_sql_client.create_and_wait_for_completion(
query.strip())
def copy_to(self,
source,
schema,
limit=None,
retry_times=DEFAULT_RETRY_TIMES):
query = self.compute_query(source, schema)
columns = self._get_query_columns_info(query)
copy_query = self._get_copy_query(query, columns, limit)
return self._copy_to(copy_query, columns, retry_times)
def copy_from(self, gdf, table_name, if_exists='fail', cartodbfy=True):
schema = self.get_schema()
table_name = self.normalize_table_name(table_name)
columns = get_dataframe_columns_info(gdf)
if if_exists == 'replace' or not self.has_table(table_name, schema):
log.debug('Creating table "{}"'.format(table_name))
self._create_table_from_columns(table_name, columns, schema,
cartodbfy)
elif if_exists == 'fail':
raise Exception(
'Table "{schema}.{table_name}" already exists in your CARTO account. '
'Please choose a different `table_name` or use '
'if_exists="replace" to overwrite it.'.format(
table_name=table_name, schema=schema))
else: # 'append'
pass
self._copy_from(gdf, table_name, columns)
return table_name
def create_table_from_query(self,
query,
table_name,
if_exists,
cartodbfy=True):
schema = self.get_schema()
table_name = self.normalize_table_name(table_name)
if if_exists == 'replace' or not self.has_table(table_name, schema):
log.debug('Creating table "{}"'.format(table_name))
self._create_table_from_query(query, table_name, schema, cartodbfy)
elif if_exists == 'fail':
raise Exception(
'Table "{schema}.{table_name}" already exists in your CARTO account. '
'Please choose a different `table_name` or use '
'if_exists="replace" to overwrite it.'.format(
table_name=table_name, schema=schema))
else: # 'append'
pass
return table_name
def has_table(self, table_name, schema=None):
query = self.compute_query(table_name, schema)
return self._check_exists(query)
def delete_table(self, table_name):
query = _drop_table_query(table_name)
output = self.execute_query(query)
return not ('notices' in output
and 'does not exist' in output['notices'][0])
def rename_table(self, table_name, new_table_name, if_exists='fail'):
new_table_name = self.normalize_table_name(new_table_name)
if table_name == new_table_name:
raise ValueError(
'Table names are equal. Please choose a different table name.')
if not self.has_table(table_name):
raise Exception(
'Table "{table_name}" does not exist in your CARTO account.'.
format(table_name=table_name))
if self.has_table(new_table_name):
if if_exists == 'replace':
log.debug('Removing table "{}"'.format(new_table_name))
self.delete_table(new_table_name)
elif if_exists == 'fail':
raise Exception(
'Table "{new_table_name}" already exists in your CARTO account. '
'Please choose a different `new_table_name` or use '
'if_exists="replace" to overwrite it.'.format(
new_table_name=new_table_name))
self._rename_table(table_name, new_table_name)
return new_table_name
def update_privacy_table(self, table_name, privacy=None):
DatasetInfo(self.auth_client, table_name).update_privacy(privacy)
def get_privacy(self, table_name):
return DatasetInfo(self.auth_client, table_name).privacy
def get_schema(self):
"""Get user schema from current credentials"""
query = 'SELECT current_schema()'
result = self.execute_query(query, do_post=False)
return result['rows'][0]['current_schema']
def get_geom_type(self, query):
"""Fetch geom type of a remote table or query"""
distict_query = '''
SELECT distinct ST_GeometryType(the_geom) AS geom_type
FROM ({}) q
LIMIT 5
'''.format(query)
response = self.execute_query(distict_query, do_post=False)
if response and response.get('rows') and len(response.get('rows')) > 0:
st_geom_type = response.get('rows')[0].get('geom_type')
if st_geom_type:
return map_geom_type(st_geom_type[3:])
return None
def get_num_rows(self, query):
"""Get the number of rows in the query"""
result = self.execute_query(
"SELECT COUNT(*) FROM ({query}) _query".format(query=query))
return result.get('rows')[0].get('count')
def get_bounds(self, query):
extent_query = '''
SELECT ARRAY[
ARRAY[st_xmin(geom_env), st_ymin(geom_env)],
ARRAY[st_xmax(geom_env), st_ymax(geom_env)]
] bounds FROM (
SELECT ST_Extent(the_geom) geom_env
FROM ({}) q
) q;
'''.format(query)
response = self.execute_query(extent_query, do_post=False)
if response and response.get('rows') and len(response.get('rows')) > 0:
return response.get('rows')[0].get('bounds')
return None
def get_column_names(self, source, schema=None, exclude=None):
query = self.compute_query(source, schema)
columns = [c.name for c in self._get_query_columns_info(query)]
if exclude and isinstance(exclude, list):
columns = list(set(columns) - set(exclude))
return columns
def is_public(self, query):
# Used to detect public tables in queries in the publication,
# because privacy only works for tables.
public_auth_client = _create_auth_client(self.credentials, public=True)
public_sql_client = SQLClient(public_auth_client)
exists_query = 'EXPLAIN {}'.format(query)
try:
public_sql_client.send(exists_query, do_post=False)
return True
except CartoException:
return False
def get_table_names(self, query):
# Used to detect tables in queries in the publication.
query = 'SELECT CDB_QueryTablesText(\'{}\') as tables'.format(query)
result = self.execute_query(query)
tables = []
if result['total_rows'] > 0 and result['rows'][0]['tables']:
# Dataset_info only works with tables without schema
tables = [
table.split('.')[1] if '.' in table else table
for table in result['rows'][0]['tables']
]
return tables
def _create_table_from_query(self,
query,
table_name,
schema,
cartodbfy=True):
query = 'BEGIN; {drop}; {create}; {cartodbfy}; COMMIT;'.format(
drop=_drop_table_query(table_name),
create=_create_table_from_query_query(table_name, query),
cartodbfy=_cartodbfy_query(table_name, schema)
if cartodbfy else '')
self.execute_long_running_query(query)
def _create_table_from_columns(self,
table_name,
columns,
schema,
cartodbfy=True):
query = 'BEGIN; {drop}; {create}; {cartodbfy}; COMMIT;'.format(
drop=_drop_table_query(table_name),
create=_create_table_from_columns_query(table_name, columns),
cartodbfy=_cartodbfy_query(table_name, schema)
if cartodbfy else '')
self.execute_long_running_query(query)
def compute_query(self, source, schema=None):
if is_sql_query(source):
return source
schema = schema or self.get_schema()
return self._compute_query_from_table(source, schema)
def _compute_query_from_table(self, table_name, schema):
return 'SELECT * FROM "{schema}"."{table_name}"'.format(
schema=schema or 'public', table_name=table_name)
def _check_exists(self, query):
exists_query = 'EXPLAIN {}'.format(query)
try:
self.execute_query(exists_query, do_post=False)
return True
except CartoException:
return False
def _get_query_columns_info(self, query):
query = 'SELECT * FROM ({}) _q LIMIT 0'.format(query)
table_info = self.execute_query(query)
return Column.from_sql_api_fields(table_info['fields'])
def _get_copy_query(self, query, columns, limit):
query_columns = [
column.name for column in columns
if (column.name != 'the_geom_webmercator')
]
query = 'SELECT {columns} FROM ({query}) _q'.format(
query=query, columns=','.join(query_columns))
if limit is not None:
if isinstance(limit, int) and (limit >= 0):
query += ' LIMIT {limit}'.format(limit=limit)
else:
raise ValueError("`limit` parameter must an integer >= 0")
return query
def _copy_to(self, query, columns, retry_times):
copy_query = 'COPY ({0}) TO stdout WITH (FORMAT csv, HEADER true, NULL \'{1}\')'.format(
query, PG_NULL)
try:
raw_result = self.copy_client.copyto_stream(copy_query)
except CartoRateLimitException as err:
if retry_times > 0:
retry_times -= 1
warn('Read call rate limited. Waiting {s} seconds'.format(
s=err.retry_after))
time.sleep(err.retry_after)
warn('Retrying...')
return self._copy_to(query, columns, retry_times)
else:
warn((
'Read call was rate-limited. '
'This usually happens when there are multiple queries being read at the same time.'
))
raise err
converters = obtain_converters(columns)
parse_dates = date_columns_names(columns)
df = read_csv(raw_result,
converters=converters,
parse_dates=parse_dates)
return df
def _copy_from(self, dataframe, table_name, columns):
query = """
COPY {table_name}({columns}) FROM stdin WITH (FORMAT csv, DELIMITER '|', NULL '{null}');
""".format(table_name=table_name,
null=PG_NULL,
columns=','.join(column.dbname
for column in columns)).strip()
data = _compute_copy_data(dataframe, columns)
self.copy_client.copyfrom(query, data)
def _rename_table(self, table_name, new_table_name):
query = _rename_table_query(table_name, new_table_name)
self.execute_query(query)
def normalize_table_name(self, table_name):
norm_table_name = normalize_name(table_name)
if norm_table_name != table_name:
log.debug('Table name normalized: "{}"'.format(norm_table_name))
return norm_table_name