"""Dataset with 'Kamiti River virus' sequences.
A dataset with 2 'Kamiti River virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/kamiti_river.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Mokola lyssavirus' sequences.
A dataset with 4 'Mokola lyssavirus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/mokola.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Cosavirus B' sequences.
A dataset with 1 'Cosavirus B' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/cosavirus_b.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Hepacivirus B' sequences.
A dataset with 1 'Hepacivirus B' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/hepacivirus_b.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Bouboui virus' sequences.
A dataset with 1 'Bouboui virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/bouboui.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Enterovirus A' sequences.
A dataset with 794 'Enterovirus A' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/enterovirus_a.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Cowpox virus' sequences.
A dataset with 74 'Cowpox virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/cowpox.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Tuhoko rubulavirus 2' sequences.
A dataset with 1 'Tuhoko rubulavirus 2' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/tuhoko_rubulavirus_2.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Feline morbillivirus' sequences.
A dataset with 12 'Feline morbillivirus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/feline_morbillivirus.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Piry vesiculovirus' sequences.
A dataset with 1 'Piry vesiculovirus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/piry_vesiculovirus.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Macaca mulatta polyomavirus 1' sequences.
A dataset with 35 'Macaca mulatta polyomavirus 1' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/macaca_mulatta_polyomavirus_1.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Seal anellovirus 2' sequences.
A dataset with 1 'Seal anellovirus 2' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/seal_anellovirus_2.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Lagos bat lyssavirus' sequences.
A dataset with 6 'Lagos bat lyssavirus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/lagos_bat.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Paraiso Escondido virus' sequences.
A dataset with 1 'Paraiso Escondido virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/paraiso_escondido.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Alphapapillomavirus 4' sequences.
A dataset with 10 'Alphapapillomavirus 4' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/alphapapillomavirus_4.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Semliki Forest virus' sequences.
A dataset with 10 'Semliki Forest virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/semliki_forest.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Shimoni bat lyssavirus' sequences.
A dataset with 1 'Shimoni bat lyssavirus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/shimoni_bat.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Dengue virus 4' sequences.
A dataset with 146 'Dengue virus 4' genomes.
Note that the sequences in this dataset are a subset of those in the
'dengue' dataset.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/dengue_4.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Yokose virus' sequences.
A dataset with 1 'Yokose virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/yokose.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Maraba vesiculovirus' sequences.
A dataset with 1 'Maraba vesiculovirus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/maraba.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with '(Human papillomavirus( type [0-9]+([a-zA-Z])?| - .+|
SIBX8| SIBX1)?|Alphapapillomavirus 9|Macaca fascicularis
papillomavirus 2)' sequences.
A dataset with 630 '(Human papillomavirus( type [0-9]+([a-zA-Z])?| -
.+| SIBX8| SIBX1)?|Alphapapillomavirus 9|Macaca fascicularis
papillomavirus 2)' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/hpv.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Yaba monkey tumor virus' sequences.
A dataset with 1 'Yaba monkey tumor virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/yaba_monkey_tumor.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Saumarez Reef virus' sequences.
A dataset with 1 'Saumarez Reef virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/saumarez_reef.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Simian torque teno virus 31' sequences.
A dataset with 1 'Simian torque teno virus 31' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/simian_torque_teno_virus_31.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Torque teno mini virus 3' sequences.
A dataset with 1 'Torque teno mini virus 3' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/torque_teno_mini_virus_3.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Menangle rubulavirus' sequences.
A dataset with 2 'Menangle rubulavirus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/menangle_rubulavirus.fasta.gz", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Spanish goat encephalitis virus' sequences.
A dataset with 1 'Spanish goat encephalitis virus' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/spanish_goat_encephalitis.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Zygosaccharomyces bailii virus Z' sequences.
A dataset with 2 'Zygosaccharomyces bailii virus Z' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/zygosaccharomyces_bailii_virus_z.fasta.gz",
relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Rhinovirus A' sequences.
A dataset with 109 'Rhinovirus A' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
__author__ = 'Hayden Metsky <*****@*****.**>'
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/rhinovirus_a.fasta", relative=True)
sys.modules[__name__] = ds
"""Dataset with 'Human betaherpesvirus 5' sequences.
A dataset with 309 'Human betaherpesvirus 5' genomes.
THIS PYTHON FILE WAS GENERATED BY A COMPUTER PROGRAM! DO NOT EDIT!
"""
import sys
from catch.datasets import GenomesDatasetSingleChrom
ds = GenomesDatasetSingleChrom(__name__, __file__, __spec__)
ds.add_fasta_path("data/human_betaherpesvirus_5.fasta.gz", relative=True)
sys.modules[__name__] = ds