def get_measurement_columns(self, pipeline):
"""Return database info on measurements made in module
pipeline - pipeline being run
Return a list of tuples of object name, measurement name and data type
"""
result = get_object_measurement_columns(self.objects_name.value)
return result
def get_measurement_columns(self, pipeline):
"""Return column definitions for measurements made by this module"""
object_name = self.object_name.value
remaining_object_name = self.remaining_objects.value
columns = get_object_measurement_columns(self.remaining_objects.value)
columns += [
(object_name, FF_CHILDREN_COUNT % remaining_object_name, COLTYPE_INTEGER,),
(remaining_object_name, FF_PARENT % object_name, COLTYPE_INTEGER,),
]
return columns
def get_measurement_columns(self, pipeline):
columns = get_object_measurement_columns(
self.output_objects_name.value)
columns += [
(
self.output_objects_name.value,
FF_PARENT % self.objects_name.value,
COLTYPE_INTEGER,
),
(
self.objects_name.value,
FF_CHILDREN_COUNT % self.output_objects_name.value,
COLTYPE_INTEGER,
),
]
return columns
def get_measurement_columns(self, pipeline):
"""Return information to use when creating database columns"""
orig_image_name = self.object_name.value
filtered_image_name = self.filtered_objects.value
columns = get_object_measurement_columns(filtered_image_name)
columns += [
(
orig_image_name,
FF_CHILDREN_COUNT % filtered_image_name,
COLTYPE_INTEGER,
),
(
filtered_image_name,
FF_PARENT % orig_image_name,
COLTYPE_INTEGER,
),
]
return columns
def get_measurement_columns(self, pipeline):
"""Return column definitions for measurements made by this module"""
subregion_name = self.subregion_objects_name.value
columns = get_object_measurement_columns(subregion_name)
for parent in (
self.primary_objects_name.value,
self.secondary_objects_name.value,
):
columns += [
(
parent,
FF_CHILDREN_COUNT % subregion_name,
COLTYPE_INTEGER,
),
(
subregion_name,
FF_PARENT % parent,
COLTYPE_INTEGER,
),
]
return columns
def get_measurement_columns(self, pipeline):
"""Return column definitions for measurements made by this module"""
columns = get_object_measurement_columns(self.output_object_name.value)
return columns
def get_measurement_columns(self, pipeline):
"""Column definitions for measurements made by IdentifyPrimaryObjects"""
return get_object_measurement_columns(self.output_objects_name.value)
def get_measurement_columns(self, pipeline):
return get_object_measurement_columns(self.output_object.value)
