예제 #1
0
파일: mex_sc.py 프로젝트: irbdavid/mex
def read_mex_orbits(fname):
    """docstring for read_mex_orbits"""

   # 11  2004 JAN 11 02:23:03    1/0021867775.48376  2004 JAN 11 07:24:05   238.65   -11.59   270.18    -2.24      274.35    86.64   0.717   228.71   357.75   222497088.5     12965.68


    utc_date = np.dtype([('Year','int'), ('MonthStr','a',3),
        ('Day','int'),('Time','a',8)])

    print('Reading %s ... ' % fname, end=' ')

    orbit_list = celsius.OrbitDict()
    lines = 0
    with open(fname) as f:
        f.readline()
        f.readline()

        for line in f.readlines():
            try:
                parts = line.lstrip().split('  ')
                n = int(parts[0])
                tmp = celsius.Orbit(
                        n,
                        celsius.utcstr_to_spiceet(parts[4]),
                        celsius.utcstr_to_spiceet(parts[1]),
                        name='MEX')

                orbit_list[n] = tmp
                lines += 1
            except Exception as e:
                if 'Unable to determine' in parts[4]:
                    break
                else:
                    raise

    for k in orbit_list:
        if k > 1:
            orbit_list[k].start = orbit_list[k-1].apoapsis
        else:
            orbit_list[k].start = orbit_list[k].periapsis - 1.0
        orbit_list[k].finish = orbit_list[k].apoapsis

    print(' Read %d lines' % lines)



    return orbit_list
예제 #2
0
파일: aspera_mf.py 프로젝트: irbdavid/mex
def plot_aspera_els(start, finish=None, verbose=False, ax=None, colorbar=True,
                        vmin=None, vmax=None, cmap=None, safe=True):
    """docstring for plot_aspera_els"""
    if cmap is None:
        cmap = plt.cm.Spectral_r

    if ax is None:
        ax = plt.gca()
    plt.sca(ax)

    if finish is None:
        finish = start + 86400.

    if vmin is None:
        vmin = 5.

    if vmax is None:
        vmax = 9.

    no_days = (finish - start) / 86400.

    if verbose: print('Plotting ASPERA/ELS between %s and %s...' % (celsius.utcstr(start, 'ISOC'), celsius.utcstr(finish, 'ISOC')))

    directory = mex.data_directory + 'aspera/els/'

    all_files_to_read = []

    for et in np.arange(start - 10., finish + 10., 86400.):
        dt = celsius.spiceet_to_datetime(et)
        f_name = directory + 'MEX_ELS_EFLUX_%4d%02d%02d_*.cef' % (dt.year, dt.month, dt.day)
        all_day_files = glob.glob(f_name)
        if not all_day_files:
            if verbose: print("No files matched %s" % f_name)
        else:
            all_files_to_read.extend(all_day_files)

    success = False
    all_extents = []
    for f_name in all_files_to_read:
        try:
            # Find energy bins:
            with open(f_name, 'r') as f:
                line_no = 0
                while line_no < 43:
                    line_no += 1
                    line = f.readline()
                    if 'DATA = ' in line:
                        energy_bins = np.fromstring(line[7:], sep=',')
                        energy_bins.sort()
                        break
                else:
                    raise IOError("No ENERGY_BINS info found in header")

            data = np.loadtxt(f_name, skiprows = 43, converters={1:lambda x: celsius.utcstr_to_spiceet(x[:-1])})

            if data.shape[1] != (energy_bins.shape[0] + 2):
                raise ValueError("Size of ENERGY_BINS and DATA doesn't match")

            # Check timing:
            dt = np.diff(data[:,1])
            spacing = np.median(dt)
            # checks = abs(dt - spacing) > (spacing/100.)
            # if np.any(checks):
            #     # raise ValueError("Spacing is not constant: %d differ by more than 1%% of %f:" % (np.sum(checks), spacing))
            #     print "Spacing is not constant: %d differ by more than 1%% of %f (Maximum = %f):" % (np.sum(checks), spacing, max(abs(dt - spacing)))
            #
            # if safe and (max(abs(dt - spacing)) > 10.):
            #     print '-- To big spacing - dumping'
            #     continue

            # Interpolate to constant spacing:
            n_records = int((data[-1,1] - data[0,1]) / spacing)
            new_data = np.empty((n_records, data.shape[1])) + np.nan
            new_data[:,1] = np.linspace(data[0,1], data[-1,1], n_records)
            for i in range(3, data.shape[1]):
                new_data[:,i] = np.interp(new_data[:,1],data[:,1], data[:,i], left=np.nan, right=np.nan)

            data = new_data

            extent = (data[0,1], data[-1,1], energy_bins[0], energy_bins[-1])

            if (extent[0] > finish) or (extent[1] < start):
                if verbose:
                    print("This block not within plot range - dumping")
                continue

            all_extents.append(extent)
            if verbose:
                print('Plotting ASPERA ELS block, Time: %s - %s, Energy: %f - %f' % (
                                celsius.utcstr(extent[0],'ISOC'), celsius.utcstr(extent[1],'ISOC'),
                                extent[2], extent[3]))
                print('Shape = ', data.shape)

            plt.imshow(np.log10(data[:,3:].T), interpolation="nearest", aspect='auto', extent=extent, vmin=vmin, vmax=vmax, cmap=cmap)
            success = True
        except IOError as e:
            if verbose:
                print('Error reading %f' % f_name)
                print('--', e)
            continue

    if success and colorbar:
        plt.xlim(start, finish)
        plt.ylim(max([e[2] for e in all_extents]), min([e[3] for e in all_extents]))
        celsius.ylabel('E / eV')
        plt.yscale('log')
        cmap.set_under('w')
        old_ax = plt.gca()
        plt.colorbar(cax=celsius.make_colorbar_cax(), cmap=cmap, ticks=[5,6,7,8,9])
        plt.ylabel(r'log$_{10}$ D.E.F.')
        plt.sca(old_ax)