def test_pools_to_status(rml_order):
# GIVEN a rml order with three samples in one pool
# WHEN parsing for status
data = StatusHandler.pools_to_status(rml_order)
# THEN it should pick out the general information
assert data['customer'] == 'cust001'
assert data['order'] == 'ctDNA sequencing - order 9'
# ... and information about the pool(s)
assert len(data['pools']) == 1
assert data['pools'][0]['name'] == '1'
assert data['pools'][0]['application'] == 'RMLS05R150'
def test_pools_to_status(rml_order_to_submit):
# GIVEN a rml order with three samples in one pool
# WHEN parsing for status
data = StatusHandler.pools_to_status(rml_order_to_submit)
# THEN it should pick out the general information
assert data["customer"] == "cust001"
assert data["order"] == "ctDNA sequencing - order 9"
# ... and information about the pool(s)
assert len(data["pools"]) == 1
assert data["pools"][0]["name"] == "pool-1"
assert data["pools"][0]["application"] == "RMLS05R150"
assert data["pools"][0]["data_analysis"] == "fastq"
assert data["pools"][0]["capture_kit"] == "Agilent Sureselect CRE"
def rml_status_data(rml_order_to_submit):
"""Parse rml order example."""
data = StatusHandler.pools_to_status(rml_order_to_submit)
return data