def test_manifest_write():
with tempfile.TemporaryDirectory() as tmpd:
manifest = Manifest(
os.path.join(test_data, 'file_set_good', 'files_good.tsv'))
manifest.validate()
(tsv_file, json_file) = manifest.write(
tmpd) # output new manifest in tsv and json.
'-i',
'--input',
dest='input',
metavar='FILE',
help='Input manifest in tsv formats',
required=True,
type=lambda s: cliutil.extn_check(parser, ('tsv'), s, readable=True))
parser.add_argument('-o',
'--output',
dest='output',
metavar='DIR',
help='Output manifest to this area, two files (tsv, json)',
required=True)
parser.add_argument('-c',
'--checkfiles',
dest='checkfiles',
action='store_true',
help='When present check file exist and are non-zero size')
args = parser.parse_args()
try:
manifest = Manifest(args.input)
manifest.validate()
(tsv_file, json_file) = manifest.write(
args.output) # output new manifest in tsv and json.
print("Created files:\n\t%s\n\t%s" % (tsv_file, json_file))
except ValidationError as ve:
print("ERROR: " + str(ve), file=sys.stderr)
exit(1)