def test_chicpeasearch_snp(self): ''' Test CHiCP search for a gene & tissue ''' snp = 'rs2476601' targetIdx = 'cp:hg19_mifsud_chicago_pm' url = "/chicp/search?searchTerm="+snp+"&targetIdx="+targetIdx+"&snp_track=gwas-barrett" request = self.factory.get(url) response = chicpeaSearch(request, url) self._HICtest(str(response.content, encoding='utf8'))
def test_chicpeasearch_region(self): ''' Test CHiCP search for a region ''' region = 'X:153043000-153390000' targetIdx = 'cp:hg19_mifsud_chicago_pm' url = "/chicp/search?searchTerm="+region+"&targetIdx="+targetIdx+"&snp_track=gwas-barrett" request = self.factory.get(url) response = chicpeaSearch(request, url) self._HICtest(str(response.content, encoding='utf8'))