def __init__(self, desk):
self.desk = desk
self.dr = desk.dr
''' ------------------------------------------------------- '''
self.entFile = bioClass.Entropy_File()
self.gg = graphPac.GeneralGraphic(desk)
self.minmax = desk.minmax
'''
Created on Sep 14, 2015
@author: Flavio Lichtenstein
@local: Unifesp DIS - Bioinformatica
for each species calc if it is p-value < .05 on its JSD distribution
'''
import classes.BarGraphic as graphPac
gg = graphPac.GeneralGraphic()
import tests.Desktop_test as Desktop_test
import random
import classes.Drosophila as dro
organism = "Drosophila"
gene = "Adh"
title = ''
cutoffLength = 100
cutoffNumSeq = 10
filename_default = 'default.ini'
if organism == "Drosophila":
dr = dro.Drosophila()
else:
dr = None
desk = Desktop_test.Desktop(filename_default, organism, gene, title,
cutoffLength, cutoffNumSeq)